| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 360104 = | 245 (0.820) | 245 (0.820) | 140/276 | NT | 50.0% | intergenic (‑38/+557) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | CP009273 | = 360286 | NA (NA) | intergenic (‑220/+375) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor | |||||
Only 100 of 543 total aligned reads displayed.
GGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGAC > CP009273/359957‑360252 | accctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaccgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaa > 2:2079049‑M1/148‑149 (MQ=255) tccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTcc > 1:2776807‑M1/144‑149 (MQ=255) gTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTcc < 1:4305565/149‑1 (MQ=255) cgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTg > 2:3180982‑M1/142‑149 (MQ=255) gggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 1:4893262‑M1/141‑149 (MQ=255) gggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 1:3483880‑M1/141‑149 (MQ=255) gggccggtgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 1:3728388‑M1/141‑149 (MQ=255) ccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAg > 1:1004729‑M1/138‑149 (MQ=255) cgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGt > 1:2276651‑M1/137‑149 (MQ=255) aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGtt > 1:2982703/1‑149 (MQ=255) ttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcggtttaggggttgcctgggggattAGTTCCGGGCAGttt < 1:2564550‑M1/15‑1 (MQ=255) gTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGttt < 1:1230048/149‑1 (MQ=255) ttCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa < 2:4124716/149‑1 (MQ=255) tgcttcgcaacgttcaaatccgctcccggcggatttttcctactcaggagagctttcaccgacaaccaacacataaaacgaaaggcccagtctttcgactgtgcctttcgttttatttgatgcctggtgaattAATTCCTGGCAGTTTa > 1:40493‑M1/134‑149 (MQ=255) tgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTa > 1:5250328‑M1/134‑149 (MQ=255) aacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcgggc < 1:4680615‑M1/24‑1 (MQ=255) tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGt > 1:19482/1‑149 (MQ=255) tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGt > 1:1591283/1‑149 (MQ=255) tttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTcc < 1:4960570/149‑1 (MQ=255) tcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCt > 1:4638243‑M1/121‑149 (MQ=255) cTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGccc < 1:515172/149‑1 (MQ=255) tccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCg < 2:3846594‑M1/34‑1 (MQ=255) ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAc > 2:4671769/1‑149 (MQ=255) ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAc > 2:1764048/1‑149 (MQ=255) gAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAGTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAcc < 2:4229215/149‑1 (MQ=255) gAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTGACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATCAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAcc < 2:711816/149‑1 (MQ=255) gCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCt > 1:3944836/1‑149 (MQ=255) ccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaactaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCt > 2:44928‑M1/109‑149 (MQ=255) gcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatgtgatgcctggggaattAGTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACccgccg < 1:1268769‑M1/44‑1 (MQ=255) aCATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCg > 2:1954092/1‑149 (MQ=255) aCATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCg > 2:3422205/1‑149 (MQ=255) ggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaatt > 2:1400047‑M1/104‑107 (MQ=255) ccAGAGGCACTTCACCGCTTGCCTGCGGTTTACCATCCAGCGCCACCATCCTGTGCAGGAGCTCCGATGATAAGCTGACAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTTTGGGGGGCGTCCTGCCCGCCACCCTCCGGGcc < 1:1302629/149‑1 (MQ=39) ccAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGcc > 2:5032901/1‑149 (MQ=255) ttgtcctactcaggagagcgttcaccgaaaaaaaacagataaaacgacaggcccagtctttcgcctgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGt > 2:1455963‑M1/100‑149 (MQ=255) agagGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGt > 1:4453813/1‑149 (MQ=255) agGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGACTTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGtgg > 2:4616963/1‑147 (MQ=255) ggCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGc < 2:3934249/149‑1 (MQ=255) tactcaggagagcgttcaccgacaaacaccagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTc > 2:4741736‑M1/94‑149 (MQ=255) cTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCTTCg > 1:794666/1‑149 (MQ=255) tCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCa < 2:2990935/149‑1 (MQ=255) aCCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAc > 1:240251/1‑149 (MQ=255) agagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTGCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGtt < 2:230462‑M1/64‑1 (MQ=255) ttGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCa > 1:4554133/1‑149 (MQ=255) gttcaccgacacacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAAt > 2:3305283‑M1/81‑149 (MQ=255) ccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑t < 2:2098084‑M1/74‑1 (MQ=255) gacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGtt < 1:4936026‑M1/14‑1 (MQ=255) ttACCATCCAGCGCCACAATCCCGTGCTGGAGCTCCGATTATAAGATGTCAAACATGAGATTTCCGATCCCCATTTCCTGGCAGTTTTTGGGGGGGGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑Tccc < 1:4126982/149‑1 (MQ=21) caaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCCGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGGTGCTTCGCCACGTTCAAATCCGC‑TCCcg < 2:4558083‑M1/78‑1 (MQ=255) aaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCcgg < 2:3485112‑M1/79‑1 (MQ=255) ccATCCAGCGCCACCATCCCGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCcggc < 2:3601596/149‑1 (MQ=255) caacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATACGC‑TCCcggcgg < 1:365477‑M1/82‑1 (MQ=255) aacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCGCCGGGCCGTTGGGTCGCCACGTGCCAATACGC‑TCccggcggc < 2:2210156‑M1/83‑2 (MQ=255) cAGCGCCACCATCCTGTGCTGGAGCTCCTATTATATGCTGTCAAACATGAGAATCCCGACCCCCAATTCCTGGCATTTTAGGGGGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGAtt < 1:2446425/149‑1 (MQ=21) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGAtt < 1:2865766/149‑1 (MQ=255) taaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGGTTCGCAACGTTCAAATACGC‑TCCCGGCGGATTTgta < 2:3132111‑M1/89‑2 (MQ=255) ccaccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTcc < 2:3555135/149‑1 (MQ=255) ccaccaGCCCGGGCCGGAGCTCCGATTATAAGCTGAAAAACATGAGAAGTCCGAGCCCCACTTCCTGGCAGTTTTGGGGGGGCGTCCTCCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTcc < 1:1455651/149‑1 (MQ=17) aaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCt < 2:2137179‑M1/91‑1 (MQ=255) aaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgccgggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATGTGTCCt < 2:235258‑M1/91‑1 (MQ=255) ccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTAc < 2:1861077/149‑1 (MQ=255) gaacggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTc > 2:3724026‑M1/55‑149 (MQ=255) aaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCa > 2:4958360‑M1/54‑119 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGt < 2:3019386/115‑1 (MQ=255) gTGCTGGAGCCCCGATTATAAGCTGACAAACATGACAATCCCGACCCCCAATCCCTGGCTGTTTAGGGGGGGCGTCCTGCCCCCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGgag < 1:980876/149‑1 (MQ=17) cccagtctttcgactgagcctttcttattattggatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGgaga > 1:1114263‑M1/49‑149 (MQ=255) cccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGgaga < 2:2932817‑M1/101‑1 (MQ=255) tcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAcc < 2:1531229‑M1/110‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGACTTCCGATCCCCAATTCCTGGCAGTTTTGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAcc < 1:3299316/149‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAATACGC‑TCCCCGCGGCTTTGTGCTACGCAGGAGTGCGGTCAcc > 1:4190813/1‑149 (MQ=18) acctatgatatgatGTCAAACTTTTCAATTCCTATCCCCAATTCCTGGATGTTTATGGCGGGCTACCTGCCCCCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAcc < 1:948879/145‑1 (MQ=14) cgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCg < 2:1258547‑M1/111‑1 (MQ=255) ccGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCg < 2:2563415/149‑1 (MQ=255) gatgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGac > 2:2885436/1‑149 (MQ=255) ctgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAcc > 2:4021063‑M1/36‑74 (MQ=255) gatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaa < 2:1180404/149‑1 (MQ=255) gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑ACCCGGCGGATTTGTCCTACACAGGAGAGCGTTCACCGacaaa < 2:4429714‑M1/116‑1 (MQ=255) cctttcgttttatttgatgcctggggaattAATTCCTGGCAGTATATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAACTTCAAAACCGC‑TCCCGGCGGATTTTTCCAACTCAGGAGAGCGTTCACCCacaaacaa < 1:3911569‑M1/119‑1 (MQ=255) ctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGcc < 1:1691679‑M1/48‑1 (MQ=255) aGCTGTCAAACATGAGAATTCCGATCCCCAAGTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAaacaac < 2:2727408/149‑1 (MQ=255) ttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGAt > 1:253583‑M1/28‑111 (MQ=255) ttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGAt < 2:253583‑M1/84‑1 (MQ=255) gacAAACATGAGAATTCCTATCCCCATTTCCTGGCTGTTTTTGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGAt < 1:3332808/147‑1 (MQ=255) gTCAAACATGAGAATTCCGCTCCCCACTTCGTGGATGTTTTGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGAt < 1:1842703/149‑1 (MQ=14) tatttgatgcctgggtatttATTTCCTGGCTGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAc > 2:944413‑M1/21‑149 (MQ=255) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGGTCAAAAACGCACCCCGGCGAATTT‑TCCCAAAAAGGTTAGCGTTCCACGACCAACAACAAATAAAAAGaa > 1:5040027/1‑149 (MQ=9) gagaATTCCGATCCCCATTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaaa < 1:2617438/149‑1 (MQ=255) gagaATTCCGATCCCCAATTCCTGGATGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaaa < 1:2196628/149‑1 (MQ=255) gttgcctggggatttATTTCGTGGATGTTTTTGGGGGGGGTCCGGCCGGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGATAGCGTTCACCGACAAACAACAGATAAAACGAAAg > 1:3135878‑M1/16‑149 (MQ=255) gatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTAGCAAAGGTCAAATACGC‑TCCCCGCGGCGTTGTGCTAATCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAg < 1:2702689‑M1/134‑1 (MQ=255) aTTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGcc < 2:5228318/149‑1 (MQ=255) tgtggggacttAATTCCTGGCAGTTTATGGCGGGCGTCCGGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGccc > 2:513605‑M1/12‑149 (MQ=255) ctggggaattAATTCCTGGCAGTTTTTGGCGGGCGTCCTGCCCGCCACCCTCCGGGCAGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCa > 2:1638205‑M1/11‑149 (MQ=255) cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATACGC‑ACCCCGCGGCTTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAAAAGATAAAACGAAAGGCCCAga > 1:3857485/1‑148 (MQ=14) aTCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCt < 2:2402580/149‑1 (MQ=38) gaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCtt < 2:806634‑M1/144‑1 (MQ=255) ccccTATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCTGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACATATAAAACGAAAGGCCCAGTCttt < 2:2816126/149‑1 (MQ=16) aattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAATCCGC‑TCCCGGCGGGGTTGTCCTACTCAGGAGGGCGGTCACCGACAAACAACAGATAAAAAGAAAGGCCCCGTCttt < 2:492666‑M1/145‑1 (MQ=255) cccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTc < 2:3342923/149‑1 (MQ=35) cAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATACGC‑TCCCGGCGGAGTTGTCCTACGCAGGAGAGGGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGa > 2:2794308/1‑149 (MQ=255) | GGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGC‑TCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGAC > CP009273/359957‑360252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |