| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,243,278 | G→A | 7.1% | S431S (AGC→AGT) | dhaM ← | putative dihydroxyacetone‑specific PTS enzymes: HPr component/EI component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,243,278 | 0 | G | A | 7.1% | 1173.3 / 47.4 | 335 | S431S (AGC→AGT) | dhaM | putative dihydroxyacetone‑specific PTS enzymes: HPr component/EI component |
| Reads supporting (aligned to +/- strand): ref base G (155/156); new base A (13/11); total (168/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 347 total aligned reads displayed.
ACGATGCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAGGT > CP009273/1243130‑1243426 | gCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCtgtg > 2:3355893/1‑149 (MQ=255) ccATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTgg > 2:528244/1‑149 (MQ=255) aTCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGa > 2:267312/1‑149 (MQ=255) aTCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGa < 1:2989081/149‑1 (MQ=255) aTCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGAGTAGGGCGCGGTGGGa > 1:4987677/1‑149 (MQ=255) tCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGAt > 1:1090483/1‑149 (MQ=255) ccGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATa < 2:2239003/149‑1 (MQ=255) gAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATAcc > 1:4603449/1‑149 (MQ=255) aCAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCGGTGGGATACCgg > 1:3076839/1‑149 (MQ=255) aGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGAc < 2:366422/149‑1 (MQ=255) aGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGAc > 2:1204685/1‑149 (MQ=255) gTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACt < 2:809327/149‑1 (MQ=255) tGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACtt > 1:2123020/1‑149 (MQ=255) ttAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCgg > 2:1569143/1‑149 (MQ=255) tAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGgc > 1:3601093/1‑149 (MQ=255) aaCCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGgcg > 2:3294662/1‑149 (MQ=255) aaCCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGAGTAGGGCGCTGTGGGATACCGGACTTCCGgcg > 1:1329686/1‑149 (MQ=255) aCCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGgcgc < 2:1019705/149‑1 (MQ=255) aCCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGgcgc < 2:5179493/149‑1 (MQ=255) aCCCTGACGGTAGAAACGTTGCGTATTAACGACCAGCGTTAGCGTTTCATCTGGTTGTATCGCAAACAGATTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTACACGGGCGAGTAGGGCGCTGTGGGATCCCCGACTTCCCgcgc > 2:1402008/1‑149 (MQ=255) cccTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCt > 1:1435418/1‑149 (MQ=255) cccTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCt > 1:4492676/1‑149 (MQ=255) cccTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCt < 1:2693515/149‑1 (MQ=255) cTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTaa < 2:1889103/149‑1 (MQ=255) tGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAg > 1:4301017/1‑149 (MQ=255) tGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAg < 2:378294/149‑1 (MQ=255) aCGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGc > 2:2877487/1‑149 (MQ=255) aCGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGc < 1:4181407/149‑1 (MQ=255) gTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGa > 2:4900538/1‑149 (MQ=255) gTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGa < 1:283589/149‑1 (MQ=255) ttGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGAt > 2:178995/1‑149 (MQ=255) ttGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGAt < 1:1804487/149‑1 (MQ=255) ttGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGAt < 2:176172/149‑1 (MQ=255) aaaCGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATAcc > 2:245244/1‑149 (MQ=255) aCGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCtt > 2:4019559/1‑149 (MQ=255) ttttAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAcc > 1:4679209/1‑149 (MQ=255) tAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAccgcc > 2:512122/1‑149 (MQ=255) aaCGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGAGTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAAccgccg > 1:5218960/1‑149 (MQ=255) agcgttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAg > 1:4842272/1‑149 (MQ=255) cgttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGtt < 1:4279311/149‑1 (MQ=255) ttagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGc > 2:2037092/1‑149 (MQ=255) tagcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCa > 2:2693787/1‑149 (MQ=255) agcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATAACGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAg > 1:1363167/1‑149 (MQ=255) gcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGt < 1:3026013/149‑1 (MQ=255) gcgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGt < 1:831993/149‑1 (MQ=255) cgttTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTa < 2:229939/149‑1 (MQ=255) tttCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACt > 2:3216657/1‑149 (MQ=255) ttcttcTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACtg > 1:2009595/1‑149 (MQ=255) ttcttcTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGATGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACtg > 2:4299178/1‑149 (MQ=255) cttctGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACtgtg < 1:4346403/149‑1 (MQ=255) tGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAg < 1:1684178/149‑1 (MQ=255) ggTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAgg < 1:457989/149‑1 (MQ=255) ggTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAgg > 2:2973117/1‑149 (MQ=255) gTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGa < 2:4956822/149‑1 (MQ=255) gTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGa > 2:4738488/1‑149 (MQ=255) gTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGa > 1:1754132/1‑149 (MQ=255) tATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATaaa < 1:1690599/149‑1 (MQ=255) tATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATaaa > 2:3154057/1‑149 (MQ=255) tATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATaaa < 1:1590144/149‑1 (MQ=255) aTCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGGAGGATAAAt > 1:3531281/1‑149 (MQ=255) aTCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAAt > 1:911357/1‑149 (MQ=255) aTCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAAt < 2:4857005/149‑1 (MQ=255) cGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGt < 1:1506527/149‑1 (MQ=255) gCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGtt < 1:556331/149‑1 (MQ=255) gCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGtt > 2:5035536/1‑149 (MQ=255) cATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTtc > 1:3765154/1‑149 (MQ=255) aGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGc > 2:3925770/1‑149 (MQ=255) aGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGc > 1:3847417/1‑149 (MQ=255) gTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGcc > 2:1261384/1‑149 (MQ=255) tctcACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGt < 1:4779188/149‑1 (MQ=255) tcACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAg > 2:438912/1‑149 (MQ=255) cACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGAGTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGa > 1:4553109/1‑149 (MQ=255) ccTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTCGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATa > 2:3477228/1‑149 (MQ=255) tgctgGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGt < 2:1642063/149‑1 (MQ=255) ctgGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTg < 2:212034/149‑1 (MQ=255) aaTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGt > 1:3474730/1‑149 (MQ=255) aaTCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGt < 2:3034213/149‑1 (MQ=255) tCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTa < 1:613249/149‑1 (MQ=255) cAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTaaa < 1:231194/149‑1 (MQ=255) aGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAAc < 1:267395/149‑1 (MQ=255) aGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAAc > 2:4177039/1‑149 (MQ=255) gCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACt < 1:287593/149‑1 (MQ=255) gCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACt > 1:4077060/1‑149 (MQ=255) ccAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTg > 1:2423598/1‑149 (MQ=255) cAATCCCCAGTTCACGGGCGATTAGGGCACTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGc < 1:3256741/149‑1 (MQ=255) aaTCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCg > 2:1116342/1‑149 (MQ=255) tCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCggg < 1:5010456/149‑1 (MQ=255) cAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGtt < 1:3355893/149‑1 (MQ=255) cAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGtt < 1:2195032/149‑1 (MQ=255) cACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTtcttct > 1:2493544/1‑149 (MQ=255) aCGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTcttctt < 2:1132544/149‑1 (MQ=255) cGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCttt < 2:3563376/149‑1 (MQ=255) gggCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTc < 2:2840617/149‑1 (MQ=255) gCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGt < 1:1048260/149‑1 (MQ=255) aTTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTg > 1:3693593/1‑149 (MQ=255) tAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTggg < 1:2043948/149‑1 (MQ=255) aGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGt < 2:2357055/149‑1 (MQ=255) gcgcTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAg < 1:1963319/149‑1 (MQ=255) gcgcTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAg < 1:1261246/149‑1 (MQ=255) gcTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAGGt > 2:4501503/1‑149 (MQ=255) | ACGATGCCATCCGAACAGTGGCTTAACCCTGACGGTTGAAACGTTGCGTTTTAACGTCCAGCGTTAGCGTTTCTTCTGGTTGTATCGCATACAGTTTCTCACCCTGCTGGCAAATCCAGCCAATCCCCAGTTCACGGGCGATTAGGGCGCTGTGGGATACCGGACTTCCGGCGCTAAGGCAGATACCTTTTACAACCGCCGGATCCAGTTGCAGTACTGTGGAAGGATAAATGTTCTCCGCCAGTAGAATAGTTGGCGAGTTAAACTGCGGGAGTTCTTCTTTCGTTTGGGTCAGGT > CP009273/1243130‑1243426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |