| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,386,008 | G→T | 80.5% | Q35K (CAG→AAG) | ycjY ← | S9 homolog non‑peptidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,386,008 | 0 | G | T | 80.5% | 573.0 / 170.1 | 281 | Q35K (CAG→AAG) | ycjY | S9 homolog non‑peptidase family protein |
| Reads supporting (aligned to +/- strand): ref base G (26/29); new base T (85/141); total (111/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
Only 100 of 284 total aligned reads displayed.
TCTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGA > CP009273/1385860‑1386153 | tCTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTg < 1:3936452/149‑1 (MQ=255) aCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATAc < 1:2411462/149‑1 (MQ=255) aCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATAc < 1:4711069/149‑1 (MQ=255) aCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATAc < 1:3147219/149‑1 (MQ=255) tGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCACCTGGGTGAGATAACACAATTGCCGTATACTg > 2:2028871/1‑149 (MQ=255) tGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTTCCTtataatt > 2:4643986/1‑146 (MQ=255) tGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTg < 2:3492690/149‑1 (MQ=255) gACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGAGATAACACAAATTCCTGATACTGa > 2:4661794/1‑149 (MQ=255) cgGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑Cggg < 2:4337921/149‑1 (MQ=255) ggCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGt < 2:5037826/149‑1 (MQ=255) cTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCCCCGGGGTGTGATAACACAAATTCCAGATAAATA‑CGGGttt > 1:3293518/1‑149 (MQ=255) tCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTtc < 2:2051366/149‑1 (MQ=255) ccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCaaa < 2:3013718/149‑1 (MQ=255) ccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCAGGGTTAGATAACACAAATTCCTTATAATGA‑AGGGTTTCATaaaa > 2:2000003/1‑149 (MQ=255) cACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTATTTAACGCCCCCACCAGGGTGAGATAAAACAAATGCCGTATACATA‑CGGGTTTTATaaaaa > 2:3598121/1‑148 (MQ=255) ttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTg < 1:1277380/149‑1 (MQ=255) cACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTTTATTTTAAACCCCCCCCAGGGTGGGATAAAACCAAAGCCATATAAAGA‑CGGGGTTAATAAAAattttgt > 1:4083150/1‑146 (MQ=255) cACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGa < 2:1250650/149‑1 (MQ=255) cACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGa < 2:333443/149‑1 (MQ=255) cACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGGGGGATAACACAATTGCCTTATACTGA‑CGGGTTTAATCAAATTTTTGa > 1:4803935/1‑149 (MQ=255) cACCGTGATAAGATGCGTCATCAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTGTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAAGTTTGGa < 2:1193841/149‑1 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAAATGCCTTATACTGA‑AGGGTTTCATCAAATTTTTGAg > 2:659012/1‑149 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTAATCAAATTTTGGAg > 2:415734/1‑149 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCAGGGTGAGATAACACAAATGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAg > 2:3281704/1‑149 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTTTCTTTAAAGCCCCCACCAGGGTGGGATAACACAAATGACATATAATGA‑CGGGTTTCAAAAAATTTTggggggt > 1:822572/1‑148 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGa < 1:2140084/149‑1 (MQ=255) tGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGaa < 1:4479256/149‑1 (MQ=255) tGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTTAAGCCCCCCCCCGGGGGAGGTAACACAAATTCCATATAATTACCGGGTTACTAAAAATTTTGGTGGGa > 1:4009102/1‑149 (MQ=255) gATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCGGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGGTTCATCAAATTTTGGAGGGaaa > 2:1663953/1‑149 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAAt < 2:3573480/149‑1 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAAt < 2:83894/149‑1 (MQ=255) aGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGa < 1:511510/149‑1 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGAt < 2:4434512/149‑1 (MQ=255) tGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCa < 1:4658622/149‑1 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCa < 2:4940464/149‑1 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCa < 1:1357097/149‑1 (MQ=255) aTAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCCCCGGGGTGAGATAACACAAATTCCCTATACAGA‑CGGGTTTCATCAAAATTTGGAGGGAAATAGATCACTGCAg > 1:3841705/1‑149 (MQ=255) aTAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAg < 1:4088411/149‑1 (MQ=255) tAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGa < 2:553575/149‑1 (MQ=255) tAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTTTGTTTTAAGCCCCCCCCCGGGGGGGGTAAAAAAAATTGCGGATACAGA‑AGGGTTTGATCAAAATTTGGTTGGTAATAGATAAATGCAGa > 1:1785836/1‑149 (MQ=255) gCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCGTGGTGAGATAACACCATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTTGAGGGAAATATAACACAGCAGACaa > 2:115357/1‑149 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAag < 2:1950950/149‑1 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAag < 2:2817322/149‑1 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAaga < 1:3702530/149‑1 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAaga < 1:2926108/149‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 1:3382289/149‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCGGGGGGAGATAAAACAATTGCCGTATAATGA‑CGGGTTTAATCAAATTTTTGTGGGTAATAGATCACAGCAGACAAagag > 1:2047214/1‑149 (MQ=255) aGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAgaga < 1:1491184/149‑1 (MQ=255) tGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCTGGGTGTGATAAAACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATAACTGCAGACAAAGAGATg > 2:3775910/1‑149 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGtt < 2:2117766/149‑1 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGtt < 1:1088920/149‑1 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCCCCGGGGTGAGATAACACAAATGCCTTATACTTA‑CGGGGTTAATCAAAATTTGGGGGGAAATAGATAACAGCATCCAAAGAGATGGtt > 2:1822032/1‑149 (MQ=255) aaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTgg < 1:914950/149‑1 (MQ=255) ccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTTGATGGAAATATATAACTGCAGACAAAGAGATGGTTGGatta > 2:3926129/1‑149 (MQ=255) ccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTATTTAACGCCCCCACCTGGGTTAGATAACACAATTTCCATATACTTA‑CGGGTTTAATCAAATTTTTGTGGGAAATAGATCACAGCAGACCAAGAGATGGTTGGatta > 2:2119661/1‑149 (MQ=255) cTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCCCCCGGGTGAGATAAAACAAATTCCGTATAAAGA‑AGGGGTTAAAAAAAATTTTGGGGGAAAAATATCACAGCACACAAAAAGATGGGTGGtttat > 1:243985/1‑149 (MQ=255) cTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCGGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat > 2:353150/1‑149 (MQ=255) gttCCGCCAGTTTTTTGGCATTGGTTCGGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGTGTTTCATCAATTTTTGGAGGGAAATAGATCACTGCAGACTATGAGATGGTTGGATTATTg < 2:3545881/148‑1 (MQ=255) gtCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGc < 1:1887565/148‑1 (MQ=255) tcggcatttttttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGTTAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGACATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTg < 1:299757/142‑1 (MQ=255) ccGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAACTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTg < 1:1397991/149‑1 (MQ=255) cAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAg < 1:5233025/149‑1 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGt < 2:487139/149‑1 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGGTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGt < 2:4760180/149‑1 (MQ=255) tttGGCATAGGTTCCGGCCGTTTGTTCTTTAACCCCCCCACCAGGGTGAGATAACACAAATGCCTTATACAGA‑CGGGGGTCATCAAATTTTGGAGGGAAAAAGATCACAGCCGACAAAGAGCTGGTTGGATTATTTCTGTTAGTGAAGc > 2:2441882/1‑149 (MQ=255) ttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCt < 1:982721/149‑1 (MQ=255) aTAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACtt < 2:4692492/149‑1 (MQ=255) aGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGAGATAACACAAATTCCATAAAATTA‑CGGGTTTAAACAAATTTTTGAGGGAAATATAAAACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTATTGAAGCTGaaatta > 2:512193/1‑144 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 1:685679/149‑1 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 1:2797880/149‑1 (MQ=255) gTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat > 2:1543954/1‑149 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt < 1:2659021/149‑1 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt < 2:4477777/149‑1 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt > 1:1813305/1‑149 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGtt < 1:2000003/149‑1 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGACATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGtt > 1:1126093/1‑149 (MQ=255) tttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTcc < 2:2234536/149‑1 (MQ=255) ttAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCt > 2:2996876/1‑149 (MQ=255) aaCGCCCCCACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa < 1:2835336/149‑1 (MQ=255) gCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATgg > 1:3188799/1‑149 (MQ=255) ccccACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAg > 1:945453/1‑149 (MQ=255) cccACCTGGGTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGTAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGt > 2:691599/1‑149 (MQ=255) ggTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGtt > 2:2281485/1‑149 (MQ=255) ggTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGtt < 1:4386700/149‑1 (MQ=255) gTGAGATAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTAACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTc > 1:2339240/1‑149 (MQ=255) gTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTc < 1:3541479/149‑1 (MQ=255) agaTAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt > 1:1514922/1‑149 (MQ=255) agaTAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt < 2:718260/149‑1 (MQ=255) aTAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtttt > 2:4258067/1‑149 (MQ=255) aTAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtttt > 2:2466270/1‑149 (MQ=255) aTAACACAATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtttt > 2:4257876/1‑149 (MQ=255) cacaATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACg > 2:2741441/1‑149 (MQ=255) acaATTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACgg > 2:1515888/1‑149 (MQ=255) caATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGt < 2:2636229/149‑1 (MQ=255) aTTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 2:2975579/149‑1 (MQ=255) aTTGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 2:3995371/149‑1 (MQ=255) ttGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTgg < 1:2892881/149‑1 (MQ=255) ttGCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTgg < 2:4628175/149‑1 (MQ=255) gCCTTATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTg < 1:1138790/149‑1 (MQ=255) ccTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGa < 1:4942101/149‑1 (MQ=255) | TCTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACACAATTGCCTGATACTGA‑CGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGA > CP009273/1385860‑1386153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |