| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,604,068 | G→T | 43.5% | T290T (ACC→ACA) | uxaB ← | altronate oxidoreductase, NAD‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,604,068 | 0 | G | T | 43.5% | 235.5 / inf | 287 | T290T (ACC→ACA) | uxaB | altronate oxidoreductase, NAD‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (102/60); new base T (53/72); total (155/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.93e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 295 total aligned reads displayed.
AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTC > CP009273/1603922‑1604214 | aaaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTgt > 2:4734216/1‑149 (MQ=255)aaaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTgt < 1:3488145/149‑1 (MQ=255) aaGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCtgtg < 1:519345/149‑1 (MQ=255) aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTgtgt > 1:1328008/1‑149 (MQ=255) aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGgtgt < 2:4263726/149‑1 (MQ=255) aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGgtgt > 1:572150/1‑149 (MQ=255) aGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATACGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGgtgt > 2:3593025/1‑149 (MQ=255) gATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCtgtgtg < 1:913053/149‑1 (MQ=255) aTTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGGAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTgc < 2:3186378/149‑1 (MQ=255) tCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTgcgc > 2:2974919/1‑149 (MQ=255) cAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCAc > 1:1104101/1‑149 (MQ=255) cAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCAc > 2:2154383/1‑149 (MQ=255) ttCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGt > 2:3196481/1‑149 (MQ=255) ttCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGt < 1:3058583/149‑1 (MQ=255) tcatcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGtt < 1:3941964/149‑1 (MQ=255) catcaCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTg < 1:4447227/149‑1 (MQ=255) caCGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAgg > 1:5160435/1‑149 (MQ=255) aCGAGGCAAATCCAGTACCGGAATAATTTCTTAGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGa < 2:1466289/149‑1 (MQ=255) cGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGAt < 1:3028133/149‑1 (MQ=255) gAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGAtt < 1:2386259/149‑1 (MQ=255) gAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGAtt > 1:705345/1‑149 (MQ=255) gAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGAtt > 1:2970354/1‑149 (MQ=255) aGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTg > 1:1649061/1‑149 (MQ=255) ggCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGc < 2:1169780/149‑1 (MQ=255) aaaTCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCAc < 1:141594/149‑1 (MQ=255) tCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACttt > 1:287291/1‑149 (MQ=255) tCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACttt < 1:2816350/149‑1 (MQ=255) tCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACttt > 1:3263942/1‑149 (MQ=255) tCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACttt < 1:2177871/149‑1 (MQ=255) cAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGc > 1:3967547/1‑149 (MQ=255) cAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGc < 1:698480/149‑1 (MQ=255) cAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGc > 1:1348863/1‑149 (MQ=255) gTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGt < 1:3699327/149‑1 (MQ=255) ggAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCttt < 1:5221286/149‑1 (MQ=255) gAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTg > 1:3820345/1‑149 (MQ=255) gAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTg < 2:3530340/149‑1 (MQ=255) aataatTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGt < 2:1443368/149‑1 (MQ=255) ataatTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTa < 2:1822652/149‑1 (MQ=255) aatTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACg > 2:4636919/1‑149 (MQ=255) atTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACgg < 1:330684/149‑1 (MQ=255) ttcttcGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGtt < 2:572150/149‑1 (MQ=255) ttcGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTaa > 2:1465725/1‑149 (MQ=255) ttcGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTaa > 1:1950223/1‑149 (MQ=255) tcGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAat < 2:1697389/149‑1 (MQ=255) cGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAata < 1:732293/149‑1 (MQ=255) gATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGt > 2:2797845/1‑149 (MQ=255) tttttCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTcaacaa < 1:1128717/149‑1 (MQ=255) ttCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCa > 1:1375843/1‑149 (MQ=255) cAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGc > 1:4970720/1‑149 (MQ=255) aaCGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCa > 1:4602601/1‑149 (MQ=255) aaCGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGATGATTGAAACTTTGAGTTAATTGTACGGTTTAATATATTCAACAATAAGct > 2:3299880/1‑148 (MQ=255) gAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGt < 2:2272697/149‑1 (MQ=255) gAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGt > 1:1777905/1‑149 (MQ=255) aTGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTg < 2:1113777/149‑1 (MQ=255) cgcAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGc < 2:3253612/149‑1 (MQ=255) gcAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCg > 1:1081666/1‑149 (MQ=255) cAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCgg < 1:3729297/149‑1 (MQ=255) aaTTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGat < 2:822496/149‑1 (MQ=255) aTTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGata > 1:2455451/1‑149 (MQ=255) aTTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGata < 1:4070083/149‑1 (MQ=255) aTTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGata < 1:4797964/149‑1 (MQ=255) cAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTg > 1:4040725/1‑149 (MQ=255) aGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGt > 1:1277310/1‑149 (MQ=255) gCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTc < 1:4101100/149‑1 (MQ=255) gCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTc > 1:467792/1‑149 (MQ=255) aTCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCa < 2:943411/149‑1 (MQ=255) ttCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACg > 1:1493884/1‑149 (MQ=255) cATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCa > 2:2025757/1‑149 (MQ=255) aTCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAg > 1:4133845/1‑149 (MQ=255) tCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGt > 1:4494140/1‑149 (MQ=255) tCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGt > 2:2165092/1‑149 (MQ=255) gCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTc < 1:80960/149‑1 (MQ=255) gCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTc < 1:1679725/149‑1 (MQ=255) tCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAgn < 1:4278877/149‑2 (MQ=255) tCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTATGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGt < 1:2289438/149‑1 (MQ=255) aCCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCg > 2:1026332/1‑149 (MQ=255) aCCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCg > 2:1272941/1‑149 (MQ=255) tACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTa > 2:4008917/1‑149 (MQ=255) tACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTa > 1:611136/1‑149 (MQ=255) aCGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTaa < 1:4408740/149‑1 (MQ=255) tCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGAttt < 1:4285215/149‑1 (MQ=255) cAGCCCTGCCTGGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCg > 2:2412449/1‑149 (MQ=255) gCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGt < 2:1939380/149‑1 (MQ=255) cccTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTc < 2:67630/149‑1 (MQ=255) cccTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTc < 2:1406915/149‑1 (MQ=255) cctgcctgGAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTcc < 2:4387542/149‑1 (MQ=255) gcctgGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTg > 1:2622992/1‑149 (MQ=255) ggAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATc < 2:502941/149‑1 (MQ=255) ggAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATc > 2:3778692/1‑149 (MQ=255) gAACGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATca > 1:4783060/1‑149 (MQ=255) aaCGCCACCGGCACCAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATcac < 1:2064441/149‑1 (MQ=255) aaCGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATcac > 2:3734911/1‑149 (MQ=255) aaCGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATcac > 2:4921554/1‑149 (MQ=255) aaCGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGATGAGCGGATATTTGTCCAGACGCAGGTCAGTCGCTAAGGATTTCGGTCCCTGAATcac > 2:1129913/1‑149 (MQ=255) cGCCACCGTCACCAGCGCTGTTTGCGCACCGTTGATGATTGACACTTTGCGTTCTTTGTACGGTTTAATATAGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTACCTGAATCACaa < 2:1759434/149‑1 (MQ=255) cGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACaa > 2:2490953/1‑149 (MQ=255) ccAGCGCTGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAg < 1:1726180/149‑1 (MQ=255) ccAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAg > 1:2904030/1‑149 (MQ=255) cgcgGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGtt < 2:5080646/149‑1 (MQ=255) gcgGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTc < 1:5031575/149‑1 (MQ=255) | AAAGATTCCAGTTCATCACGAGGCAAATCCAGTACCGGAATAATTTCTTCGTAGATAGCTTTTTCAACGAATGCGCAAATTTCAGCATCGTTCATCGCTTCACCTACGGTATCCAGCCCTGCCTGGAACGCCACCGGCACCAGCGCGGTGTGCGCACCGTTGAGGATTGCCACTTTGCGTTCTTTGTACGGTTTAATATCGTCAACAATCAGCACGTTGAGCGGATATTTGTCCAGACGCAGTTCAGTCGCTAAGGATTTCGGTCCCTGAATCACAAACAGGTAAAAGTGTTC > CP009273/1603922‑1604214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |