| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,671,110 | C→A | 7.2% | D351Y (GAT→TAT) | pntA ← | pyridine nucleotide transhydrogenase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,671,110 | 0 | C | A | 7.2% | 1101.9 / 46.1 | 291 | D351Y (GAT→TAT) | pntA | pyridine nucleotide transhydrogenase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (119/151); new base A (11/10); total (130/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 | |||||||||||
Only 100 of 300 total aligned reads displayed.
CACGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGT > CP009273/1670962‑1671257 | cACGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACatcatc > 2:1867187/1‑149 (MQ=255) aCGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACAtcatca < 1:3957241/149‑1 (MQ=255) cGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCaa < 1:3120766/149‑1 (MQ=255) gCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTTTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCaa > 1:990007/1‑149 (MQ=255) cAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAAc < 2:4372996/149‑1 (MQ=255) cAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAAc < 1:5200219/149‑1 (MQ=255) aGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACa < 1:5177636/149‑1 (MQ=255) ggTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAg < 2:4197599/149‑1 (MQ=255) ggTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCAGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAAACACCACAACATCAAAATCAACAg > 1:4926127/1‑149 (MQ=255) gTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGt < 1:2262861/149‑1 (MQ=255) tttttCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGatat < 1:28369/149‑1 (MQ=255) tttttCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGatat < 2:3107347/149‑1 (MQ=255) ttttCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATAtt < 1:4604921/149‑1 (MQ=255) tttCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACAACATCAAAATCAACAGTGATAttt > 1:1842077/1‑148 (MQ=255) aGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCtt < 1:3118353/149‑1 (MQ=255) aGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTAGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCtt > 1:5094717/1‑149 (MQ=255) ttCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTtctc > 1:3165986/1‑149 (MQ=255) cACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTATCtt > 1:4469641/1‑149 (MQ=255) cACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCtt < 2:1697487/149‑1 (MQ=255) aCTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCttt > 2:1477888/1‑149 (MQ=255) tCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGca < 2:1106611/149‑1 (MQ=255) tCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGca > 1:3304524/1‑149 (MQ=255) cGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGcaca < 1:1719359/149‑1 (MQ=255) gCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAg > 2:284125/1‑149 (MQ=255) gCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAg < 2:242970/149‑1 (MQ=255) gCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAg < 2:1194847/149‑1 (MQ=255) ccGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGt > 2:4905718/1‑149 (MQ=255) ccGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGt < 2:3330292/149‑1 (MQ=255) cGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGtt < 2:4478023/149‑1 (MQ=255) gtgCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTACTGTCGCCCGCACGGATCACGGTCACGCCGCGAATCTCCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACATCAGTTTCCGCAGa > 1:1320187/1‑149 (MQ=255) tgCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGAt < 2:2808068/149‑1 (MQ=255) cgccTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTaa < 1:4029494/149‑1 (MQ=255) cgccTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTaa < 1:938086/149‑1 (MQ=255) cgccTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTaa > 1:4954216/1‑149 (MQ=255) tGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAg > 2:1999291/1‑149 (MQ=255) ggCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGtt < 1:3433964/149‑1 (MQ=255) ggCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGtt > 2:3918863/1‑149 (MQ=255) gctgagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGttt > 1:2724566/1‑149 (MQ=255) gctgagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGttt < 1:628968/149‑1 (MQ=255) ctgagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTtg < 1:3732767/149‑1 (MQ=255) tgagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTtgt > 1:1567344/1‑149 (MQ=255) gagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTtgtg > 1:2841701/1‑149 (MQ=255) gagctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCAGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTtgtg < 1:3337725/149‑1 (MQ=255) agctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGc > 1:705649/1‑149 (MQ=255) agctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGc > 1:217958/1‑149 (MQ=255) gctgaTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCCAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGcc > 2:2123949/1‑149 (MQ=255) aTACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTaa > 2:1718079/1‑149 (MQ=255) aCCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAg < 2:4006492/149‑1 (MQ=255) gAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgt < 2:3648815/149‑1 (MQ=255) gAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgt < 1:2201747/149‑1 (MQ=255) aaTCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgtg > 2:960921/1‑149 (MQ=255) aaTCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGAGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCtgtg < 2:4296036/149‑1 (MQ=255) aTCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGa > 2:462517/1‑149 (MQ=255) cggcggTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAgg < 2:2038609/149‑1 (MQ=255) ggcggTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGa < 1:2814214/149‑1 (MQ=255) ggTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTg < 2:3751763/149‑1 (MQ=255) ggCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCgg > 2:3796004/1‑149 (MQ=255) ccAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCa > 2:5105482/1‑149 (MQ=255) ccAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCa < 1:82973/149‑1 (MQ=255) ccAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCa > 2:436444/1‑149 (MQ=255) cAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAg > 2:3261570/1‑149 (MQ=255) cAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAg < 1:4309682/149‑1 (MQ=255) cAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAg > 1:2276121/1‑149 (MQ=255) aGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGa > 1:4805325/1‑149 (MQ=255) aGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGa > 2:1593854/1‑149 (MQ=255) ggTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGAc < 2:542589/149‑1 (MQ=255) aaTTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGc > 1:755830/1‑149 (MQ=255) aaTTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGc > 1:4380535/1‑149 (MQ=255) aTTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGcc > 2:3064585/1‑149 (MQ=255) tttCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGccc < 2:4494704/149‑1 (MQ=255) tttCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGccc < 1:1063053/149‑1 (MQ=255) ttCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCg < 1:29786/149‑1 (MQ=255) cGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGa > 1:4238135/1‑149 (MQ=255) gCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGaa < 2:3454153/149‑1 (MQ=255) gCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGaa < 2:4525898/149‑1 (MQ=255) cGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGAt < 2:1291468/149‑1 (MQ=255) aCGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCgg > 1:518989/1‑149 (MQ=255) cGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGt < 2:2633724/149‑1 (MQ=255) gATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGtat < 2:3985528/149‑1 (MQ=255) tCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGCAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATaa < 2:2148099/149‑1 (MQ=255) cACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAAc > 1:3839462/1‑149 (MQ=255) cACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAAc < 2:2274427/149‑1 (MQ=255) aCGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAAcc < 2:705649/149‑1 (MQ=255) gTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAAt < 2:3514110/149‑1 (MQ=255) tCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATc < 1:435560/149‑1 (MQ=255) cACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCa < 2:1414852/149‑1 (MQ=255) cACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCa > 1:2512613/1‑149 (MQ=255) aCGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCAc < 2:871676/149‑1 (MQ=255) cgccgaGAATCACCACATCATCAAACTCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACt < 1:203677/149‑1 (MQ=255) cgcgAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTg > 1:1152884/1‑149 (MQ=255) gcgAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGa > 2:4727226/1‑149 (MQ=255) aaTCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGacac > 1:1389809/1‑149 (MQ=255) aaTCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGacac > 2:1517507/1‑149 (MQ=255) aTCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACAcc < 2:4396719/149‑1 (MQ=255) caccacCTCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCAt < 2:493021/149‑1 (MQ=255) catcatCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTcc < 2:3183119/149‑1 (MQ=255) catcatAAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTcc < 1:1441653/149‑1 (MQ=255) atcatcAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCg > 2:2175309/1‑149 (MQ=255) tcatcaAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGt > 2:2935204/1‑149 (MQ=255) tcaAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGt < 1:2256728/149‑1 (MQ=255) | CACGGTGAGCAGGTACATTTTTCCTCAGTTTTCACTTCCGGTGCCGCTTTTTGTGCCGCCTGCGGCTGAGCTGATACCTGAATCGGCGGTGCCGGCCAGGTAATTTCGCCCGCACGGATCACGGTCACGCCGCGAATCACCACATCATCAAAATCAACAGTGATATTGCCGTCTTTCTCTTTGCACAACAGTTTCAGCAGATTAACGAGGTTTGTGCCGTAAAGCTGTGAGGATTGCGTCGGCAGACGGCCCGGAAGATCGGTATAACCAATCACTTTGACACCATTTTCCGTAGT > CP009273/1670962‑1671257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |