Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,748,094 T→A 9.6% intergenic (‑7/+14) ydhV ← / ← ydhY putative oxidoreductase subunit/putative 4Fe‑4S ferridoxin‑type protein; FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,748,0940TA 9.6% 955.9 / 77.4 283intergenic (‑7/+14)ydhV/ydhYputative oxidoreductase subunit/putative 4Fe‑4S ferridoxin‑type protein; FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex
Reads supporting (aligned to +/- strand):  ref base T (144/112);  new base A (10/17);  total (154/129)
Fisher's exact test for biased strand distribution p-value = 6.81e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.51e-01

Only 100 of 292 total aligned reads displayed.

CTGGCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGC  >  CP009273/1747946‑1748242
                                                                                                                                                    |                                                                                                                                                    
cTGGCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGAttttt                                                                                                                                                      <  1:1264810/149‑1 (MQ=255)
  ggCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATc                                                                                                                                                    >  1:4994085/1‑149 (MQ=255)
   gCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTcc                                                                                                                                                   <  2:3277389/149‑1 (MQ=255)
      gTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCttt                                                                                                                                                >  2:2373966/1‑149 (MQ=255)
      gTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTGACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCttt                                                                                                                                                <  2:2712040/149‑1 (MQ=255)
          ttCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCaa                                                                                                                                            <  1:4444626/149‑1 (MQ=255)
           tCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAg                                                                                                                                           >  1:4859860/1‑149 (MQ=255)
             gTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGAt                                                                                                                                         <  2:364540/149‑1 (MQ=255)
              tCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGAtt                                                                                                                                        >  1:1939775/1‑149 (MQ=255)
              tCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGAtt                                                                                                                                        <  1:2726176/149‑1 (MQ=255)
                atacataATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTca                                                                                                                                      <  2:1863308/149‑1 (MQ=255)
                 tacataATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTcac                                                                                                                                     <  2:1439183/149‑1 (MQ=255)
                 tacataATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTcac                                                                                                                                     <  2:2868025/149‑1 (MQ=255)
                        ttttGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTaa                                                                                                                              <  2:77331/149‑1 (MQ=255)
                               gCCGAAGCCCATGCCACCTACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCttt                                                                                                                       >  1:1679450/1‑149 (MQ=255)
                               gCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCttt                                                                                                                       <  2:4848382/149‑1 (MQ=255)
                                  gAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCa                                                                                                                    >  2:3875302/1‑149 (MQ=255)
                                   aaGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCAc                                                                                                                   >  1:1711083/1‑149 (MQ=255)
                                   aaGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCAc                                                                                                                   <  2:247996/149‑1 (MQ=255)
                                    aGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACt                                                                                                                  <  2:1162545/149‑1 (MQ=255)
                                     gCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTc                                                                                                                 <  2:946525/149‑1 (MQ=255)
                                     gCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTc                                                                                                                 >  2:1974702/1‑149 (MQ=255)
                                     gCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTATCCACTc                                                                                                                 >  1:306436/1‑149 (MQ=255)
                                       ccATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGa                                                                                                               >  1:4653385/1‑149 (MQ=255)
                                       ccATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGa                                                                                                               >  1:3430699/1‑149 (MQ=255)
                                           gCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAt                                                                                                           <  1:4566364/149‑1 (MQ=255)
                                            ccACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAtt                                                                                                          <  1:965209/149‑1 (MQ=255)
                                             cACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAttt                                                                                                         >  1:3111473/1‑149 (MQ=255)
                                             cACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAttt                                                                                                         <  1:522391/149‑1 (MQ=255)
                                             cACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAttt                                                                                                         >  2:554004/1‑149 (MQ=255)
                                              aCCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAtttt                                                                                                        >  2:1561290/1‑149 (MQ=255)
                                              aCCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAtttt                                                                                                        >  2:4439879/1‑149 (MQ=255)
                                              aCCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAtttt                                                                                                        <  1:4551461/149‑1 (MQ=255)
                                              aCCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAtttt                                                                                                        <  1:1771196/149‑1 (MQ=255)
                                               ccGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGTGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAAttttt                                                                                                       >  2:1993999/1‑149 (MQ=255)
                                                    aaaaCTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGc                                                                                                  <  1:1293565/149‑1 (MQ=255)
                                                          tttAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGt                                                                                            >  1:897578/1‑149 (MQ=255)
                                                          tttAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGt                                                                                            >  1:4650556/1‑149 (MQ=255)
                                                              aaCTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTggg                                                                                        >  1:2815370/1‑149 (MQ=255)
                                                               ccTTACGGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGc                                                                                       <  1:4716908/148‑1 (MQ=255)
                                                               aCTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGc                                                                                       >  1:32997/1‑149 (MQ=255)
                                                                  tACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAgg                                                                                    >  1:1083768/1‑149 (MQ=255)
                                                                     tGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGt                                                                                 >  1:28680/1‑149 (MQ=255)
                                                                     tGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGt                                                                                 >  2:297473/1‑149 (MQ=255)
                                                                       gAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTATCCACTCTATAATTTTTAACGCCCCTGTTGGGCAGGCGttt                                                                               >  1:4422597/1‑149 (MQ=255)
                                                                        aaTCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTg                                                                              <  2:82267/149‑1 (MQ=255)
                                                                         aTCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTgc                                                                             >  2:4245324/1‑149 (MQ=255)
                                                                               gAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTc                                                                       <  1:1010654/149‑1 (MQ=255)
                                                                               gAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTc                                                                       >  2:3401123/1‑149 (MQ=255)
                                                                               gAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTc                                                                       >  2:1385690/1‑149 (MQ=255)
                                                                                aGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCa                                                                      >  2:351680/1‑149 (MQ=255)
                                                                                 gggTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCAc                                                                     >  1:3989314/1‑149 (MQ=255)
                                                                                    tAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGc                                                                  >  2:3740946/1‑149 (MQ=255)
                                                                                    tAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATATTTAACGACCCTGTTGGGCAGGCGTTTGCGCATTCACAGc                                                                  >  2:4220609/1‑149 (MQ=255)
                                                                                    tAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGc                                                                  >  1:2429638/1‑149 (MQ=255)
                                                                                     aaTATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCa                                                                 <  2:1441466/149‑1 (MQ=255)
                                                                                       tatTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATa                                                               >  1:3263419/1‑149 (MQ=255)
                                                                                       tatTTCCTGTCGTGAGATTGACTCTTAATAAATTACCTGACCAACCGTTAGCCATGATTTTTTCCTTTGCAATATTCACACAGAAATATCTTTCCACTCGATAATTTATAACGCCCCTGTTGGTCAGGCTTTTGAGCATTCACCGCATa                                                               >  2:1941526/1‑149 (MQ=255)
                                                                                         tttCCTGTCGTGAGATTGACTCTTAATATATTACCTTTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATATTTCAACTCGATAATTTTTAAAGCCCCTGTTGGGCAGGCGTTTGCGCATTAAACGCATAac                                                             >  1:1962922/1‑149 (MQ=255)
                                                                                         tttCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAac                                                             <  2:4533533/149‑1 (MQ=255)
                                                                                           tCCTGTCGTGAGATTGACTCTTAATATCTTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAATATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAacac                                                           <  1:2227719/149‑1 (MQ=255)
                                                                                           tCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAacac                                                           <  2:2039891/149‑1 (MQ=255)
                                                                                               gTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACAt                                                       <  2:1918699/149‑1 (MQ=255)
                                                                                               gTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACAt                                                       <  2:5153039/149‑1 (MQ=255)
                                                                                                tCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACAtt                                                      >  1:4804364/1‑149 (MQ=255)
                                                                                                tCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACAtt                                                      <  2:2664596/149‑1 (MQ=255)
                                                                                                 cgagagaTTGACTCTTACTATAGTACCTGTCCAACCGTTAGCCATGATTTTTGCCTTTGCAAGATTCACACAGTATTATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACAttt                                                     <  2:3580917/146‑1 (MQ=255)
                                                                                                 cGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACAttt                                                     <  1:3540745/149‑1 (MQ=255)
                                                                                                        ttGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGAt                                              <  2:4680206/149‑1 (MQ=255)
                                                                                                          gACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGAttt                                            >  2:1215252/1‑149 (MQ=255)
                                                                                                           aCTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGAtttt                                           >  1:739004/1‑149 (MQ=255)
                                                                                                           aCTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGAtttt                                           <  2:3130868/149‑1 (MQ=255)
                                                                                                            ctctTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGAttttt                                          >  1:2640411/1‑149 (MQ=255)
                                                                                                            ctctTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGAttttt                                          <  2:1598889/149‑1 (MQ=255)
                                                                                                              ctTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGACCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACAAACATTTCGTGGATTTTTTa                                        >  1:2479145/1‑149 (MQ=255)
                                                                                                                tAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACt                                      <  2:4330977/149‑1 (MQ=255)
                                                                                                                   tatatTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTc                                   <  1:3106431/149‑1 (MQ=255)
                                                                                                                    atatTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCg                                  >  2:2181755/1‑149 (MQ=255)
                                                                                                                       ttACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTa                               >  1:1528764/1‑149 (MQ=255)
                                                                                                                       ttACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTa                               <  2:1421376/149‑1 (MQ=255)
                                                                                                                          ccTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTAttt                            >  2:1982522/1‑149 (MQ=255)
                                                                                                                           cTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTa                           <  1:302725/149‑1 (MQ=255)
                                                                                                                            tGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTAc                          >  1:1391189/1‑149 (MQ=255)
                                                                                                                            tGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTAc                          >  2:1060013/1‑149 (MQ=255)
                                                                                                                             gTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACg                         <  1:3648236/149‑1 (MQ=255)
                                                                                                                              tCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACgg                        >  1:1477025/1‑149 (MQ=255)
                                                                                                                              tCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACgg                        >  1:3932709/1‑149 (MQ=255)
                                                                                                                               ccAACCGTTAGCCATGATTTTATCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGt                       >  1:4102715/1‑149 (MQ=255)
                                                                                                                                cAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTg                      >  1:587069/1‑149 (MQ=255)
                                                                                                                                 aaCCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTgg                     >  2:2158110/1‑149 (MQ=255)
                                                                                                                                      ttAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCcatc                >  2:65454/1‑149 (MQ=255)
                                                                                                                                      ttAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCcatc                >  1:4807042/1‑149 (MQ=255)
                                                                                                                                      ttAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCcatc                >  1:2190969/1‑149 (MQ=255)
                                                                                                                                      ttAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCcatc                >  2:3444658/1‑149 (MQ=255)
                                                                                                                                        aGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCcatcat              >  1:4734894/1‑149 (MQ=255)
                                                                                                                                          ccATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATcc            >  2:1716941/1‑149 (MQ=255)
                                                                                                                                           cATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCa           >  2:3814590/1‑149 (MQ=255)
                                                                                                                                             tGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACg         >  1:2096154/1‑149 (MQ=255)
                                                                                                                                                   tttCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATg   >  2:2762457/1‑149 (MQ=255)
                                                                                                                                                   tttCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATg   >  2:1856100/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGGCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGC  >  CP009273/1747946‑1748242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: