| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,708 | G→T | 6.2% | intergenic (‑25/+283) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,708 | 0 | G | T | 6.2% | 711.4 / 2.7 | 248 | intergenic (‑25/+283) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (110/109); new base T (6/21); total (117/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.24e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
CAGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGG > CP009273/2170561‑2170856 | cAGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGa < 2:3080661/149‑1 (MQ=255) ggTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGAtt < 1:1389824/149‑1 (MQ=255) gTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGAttt < 1:883643/149‑1 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑c < 2:2949439/149‑1 (MQ=255) ggCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTT‑Caa > 2:4300670/1‑149 (MQ=255) agCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑Caa < 1:3131838/148‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑Caaa < 2:1779041/149‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑aaaa > 2:1911296/1‑149 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTTGGTTT‑TAAAata > 1:1800573/1‑149 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAAtata < 1:2109030/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATaa < 1:2579693/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATaa < 1:627071/149‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATaa < 2:1412873/149‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAt < 1:4574192/149‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGTATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATg < 2:58049/149‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTT‑AAAAATATAAAGaaaa > 1:4473086/1‑148 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAatta < 1:1299927/149‑1 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAattat < 1:4277805/149‑1 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAattat < 2:1438040/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGtt < 1:4891096/149‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGtt < 2:2672095/149‑1 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGttt < 2:4416674/149‑1 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTT‑CAAAATATAATGAAATTATTTTTTTTTaa > 2:336964/1‑149 (MQ=255) tCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑CAAAATATAAAGAAATTATTTTTTTTTaa > 2:3035691/1‑149 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAat < 2:5014730/149‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAATATAATGAAAATATTTGTTTTTaaaa > 2:3271025/1‑148 (MQ=255) tttCGAGATTTTTAATATTGTATGCATGATCATCTTAACCTCCGCGCTGTTCGTTGTTCAGCATCTGCTTTTTCTATAACTCGTACATTTTCTTATCTTGTATTTTGTTTTCGTTTT‑CTAATTATATTGAAATTATTTGTTTTTAAata < 1:412692/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAata < 2:1855847/149‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTGAAAAAAAAAATAAAAAAATTTTTTTTTaaaa > 1:2301479/1‑148 (MQ=255) gtCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAatat < 1:2944361/148‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAAAAAAAATAAATTATTTTTTTTTAAatataca > 1:350604/1‑146 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTTTTTTTAAATATAGAGAt > 2:3730162/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGAt < 1:3623509/149‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGAt < 1:3477049/149‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAATAAAATTAAAATATTTTTTTTTTAATATAGAGAt > 2:3240688/1‑149 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTT‑AAAAAAATAATTAAATTATTTTTTTTTAAATATAGAGAt > 1:1119502/1‑149 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAAGAAATAATTTGTTTTTTAATATCGAGATa > 2:657777/1‑149 (MQ=255) gtgAATATTGAATGCCTGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 2:359862/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCTCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:3944302/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:835057/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:2308685/149‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAAAATAATGAAAATATTTTTTTTTAAATATAGAGATAAc > 2:3383503/1‑149 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTT‑CAAAATATAAAGTAATTATTTTTTTTTTAATATAGAGATAACGAt > 1:335555/1‑149 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑AAAAAAAAAATTAAATTATTTTTTTTTAAATATCGAGTTAAAGAt > 1:755097/1‑149 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑CAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATaaacata > 2:3349665/1‑144 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:658134/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac < 2:172225/149‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAATAAAATGTAATTATTTTTTTTTTAATATAGAGATAAAGATaac > 2:4490394/1‑149 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTT‑AAAAAAAAAAAGAAATTATTTTTTTTTTAAAATAGAGATAAAGaaaac > 2:1805683/1‑145 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATAGAGATAACGATcaca > 2:3030012/1‑149 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGGTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTCGAGTT‑CAAAAAATAAGGAAAATAATTGTTTTTAAATAACGAGATCCCCATCACcaa > 1:2121127/1‑149 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATAACaaaa > 2:4779542/1‑149 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑CAAAAAATAAAGTAATTATTTTTTTTTTAAAATCGATATAACGCTGACaaaaa > 1:4248840/1‑149 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGAGTT‑CAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACCATAACaaaaa > 2:1176704/1‑149 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:1840052/149‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGAATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:4403015/149‑1 (MQ=255) ccGGAACCGAATAACCGCCGCGCTGTGCGTTGTTCAGAATCTGATTTGTCTATACCACGTACATTTTAATATCCTGTGTTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCAAAAAAACGa < 1:2744147/149‑1 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTT‑CAAAAAATAATGAAATTAATTTTTTTTTAATATAGAGATAACGATCACAAAAAACACaa > 2:1880218/1‑149 (MQ=255) aaCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTT‑GAAAAAATAATTTAATTATTTTTTTTTTAATATAGATATAACGCTAACAAAAAAGaaaaa > 1:157087/1‑148 (MQ=255) aCCGCATACCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTAATTTTTCATATCCTGTCGTTTTTTTTCGATTT‑CAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAata < 2:5158762/149‑1 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑AAAAATATAATTAAATTAATTTTTTTTAAATATCGAGATAAAGATCACAAAAAAGAAAAAATg > 2:748321/1‑149 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑CAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAAAGACAATATTaa > 2:2175646/1‑149 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCTTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaaa < 2:2598624/149‑1 (MQ=255) aaaCCCCCGCGCTGTGCGTTCTCCACAATCTCATTTTTCCAAACCAATTAAATTTACATATACTTCCTTTTGTTTACCATTA‑CAAAATATAATCAAATAATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGaaaa < 2:2760851/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGTTTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAat < 2:2137113/149‑1 (MQ=255) aCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGAATT‑AAAAATATAAAGAAATTAATTGTTTTTAAAAATCGAGAAAACGAACACAAAAAAGACAAAATGaaaaaa > 2:2998302/1‑147 (MQ=255) ccgccgCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATTAAATTATTTGTTTTTAAATATAGAGATAAAGATCAAAAAAACGACAAAATGTAAatta > 2:3395777/1‑149 (MQ=255) gccgcGCGGTGCGTTGTACAGAATCTGCTTTGTCGAACCCACGTAAATTTTCATATCCTGCGGTTTTTTTTCGATTT‑AAAAATATAATCAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAattatt < 1:5150601/149‑1 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATGTGCTTTGTCGACACCACTTAATTTTACATAACCTGTCTTTTTTTTTCTTTTA‑AAAAATATAATTAATTTTTTTTTTTTAAAATATCGATAAAACGAACACAAACACGACAATATGAAAATTATTc < 1:2648721/149‑1 (MQ=255) gcgcTGTGCTTTGTTCAGCATCTGCTTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTA‑CAAAATATAATGAAATTTTTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCga < 1:3854934/149‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑CAAAATATAATGAAATTATTTTTTTTTAAATATAGAGATAAAGATAACAAAAACGCCAAAATGAAAATTATTagag > 2:2902073/1‑149 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagga < 2:3714400/149‑1 (MQ=255) gCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTT‑AAAAAAATAATGAAATTATTTTTTTTTTAATATCGAGATAAAGAAAACAAAAAAGAAAAAATGAAAATTATTAGAGGCGTgt > 1:406216/1‑148 (MQ=255) cGTTGTGCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATCAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 2:4962347/149‑1 (MQ=255) gttgttCAGAAGCTGCTTTGCCGATACCACTTAAATTTTAAAAACCTTTCGTTTTTTTTCGATTA‑AAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGaaa < 2:263187/149‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑GAAAAAAAAAATAAAATATTTTTTTTTTAATATAGAGATAAACATAACAAAAAACACAAAATTAAAATTATTAGAGGGGTGaaaa > 2:2391678/1‑148 (MQ=255) tttCAGCTTCTTCTTTGTCTATACCACTTAAATTTTAATATCCTGTCGTTTTTTTTCGATTT‑AAAAATATAATTAAATTATTTTTTTTTAAATTTCTATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGc < 1:292944/148‑1 (MQ=255) aGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCaaaa < 2:719735/149‑1 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAAAATAATGAAATTAATTTTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAAATATTCGAGGAGTGAAA‑GGCaaaaaa > 2:3064215/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑AAAAATATAATGAAATTATTTTTTTTTAAATATAGAGATAAAGAACACAAAAACGACAAAATGTAAATTATTAGTGGAGTGAAA‑GGCaaaaaaa > 2:2077775/1‑149 (MQ=255) tGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTTGATTT‑AAAAAAAAAAATAAAATATTTTTTTTTTAATATAGAGAGAAACATAACAAAAAAAACAAAAAGAAAAAAAAAATAGGAGTGTAA‑TGCaaaaaaaaac > 1:5024393/1‑146 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑CAAAATATAAAGAAATTATTTGTTTTTAAATATCGAGATAACCATCACCAAAACGACCATATGAAAAATATTCGCGGCGGGAAA‑GGCCAAAAAACCGcca > 2:1308159/1‑148 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTT‑GAAAAAATAAATAAATTAATTTTTTTTTAATATATATATAAACATCACAAAAAAAACAAAAAGAAAAATATTAGTTGGGGGAAA‑GGGAAAAAAAAAGCCAcccc > 1:698125/1‑148 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑CAAAATATAATGAAATTATTTTTTTTTTAATATAGAGATAAAGATAACAAAAAAGACAATATGAAAATTATTAGAGGGGTTAAAGGGCAAAAAAACgccacccc > 2:2410891/1‑142 (MQ=255) caagTAAATTTTAATATCATGTCTTTTTTTTTCGATTT‑AAAAATATATTTAAATTTTTTTTTTTTAAATATGGATTTAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGa < 2:4028184/146‑1 (MQ=255) aTTTTAATATCGTTTTTTTTTTTTTCTTTTT‑AAAAATATATTTAATTTTTTTTTTTTTAAATATCTAGAAAACAAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:4830113/149‑1 (MQ=255) cATATCCTGTCGTTTTTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 2:612986/149‑1 (MQ=255) ttGTCTTTTTTTTTATATTA‑AAAAATATAATTAAATTTTTTTTTTTAAAATAACTATATAACCAAAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcgc < 1:3609212/148‑1 (MQ=255) tttctttttttttCTATTA‑AAAAATATAATGAAATTTTTTTTTTTTAAATATCGATATAACGATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGcgcg < 1:4779542/144‑1 (MQ=255) tGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGGAGCAAAGTGcgcg > 2:4882920/1‑149 (MQ=255) tCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:1616203/1‑149 (MQ=255) ttttgtttTCTATTT‑CAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 2:4548264/148‑1 (MQ=255) tttgtttTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:4055753/1‑149 (MQ=255) ttgtttTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGGTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 2:1090675/1‑149 (MQ=255) tttttCGATTA‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 2:1534011/148‑1 (MQ=255) gtttTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:955696/1‑149 (MQ=255) tttCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:2328236/1‑149 (MQ=255) gATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:1580016/1‑149 (MQ=255) gATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:800463/1‑149 (MQ=255) gATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:1175661/1‑149 (MQ=255) | CAGGTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAA‑GGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGG > CP009273/2170561‑2170856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |