| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,309,359 | C→A | 5.8% | T5T (ACG→ACT) | infB ← | translation initiation factor IF‑2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,309,359 | 0 | C | A | 5.8% | 1179.2 / 33.3 | 308 | T5T (ACG→ACT) | infB | translation initiation factor IF‑2 |
| Reads supporting (aligned to +/- strand): ref base C (142/147); new base A (9/9); total (151/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 308 total aligned reads displayed.
AATTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCG > CP009273/3309214‑3309506 | aaTTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGtt > 2:3360529/1‑149 (MQ=255)aaTTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGtt > 1:3247678/1‑149 (MQ=255) aTTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTa > 2:1438647/1‑149 (MQ=255) aTTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTa > 2:2743709/1‑149 (MQ=255) tCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCt > 2:1897504/1‑149 (MQ=255) tGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGt < 1:1154194/149‑1 (MQ=255) cAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGc < 2:4774915/149‑1 (MQ=255) ggtggtCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTg > 1:3551546/1‑149 (MQ=255) ggtCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGttc > 1:2952502/1‑149 (MQ=255) gtCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGttcc > 1:4777308/1‑149 (MQ=255) tcaatcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttcct < 1:584525/149‑1 (MQ=255) tcaatcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttcct > 1:1434495/1‑149 (MQ=255) tcaatcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttcct < 1:3208107/149‑1 (MQ=255) caatcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttcctt < 1:2929406/149‑1 (MQ=255) caatcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttcctt < 2:2710162/149‑1 (MQ=255) atcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttccttcc > 1:4025659/1‑149 (MQ=255) atcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttccttcc < 2:1803286/149‑1 (MQ=255) atcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttccttcc < 2:4749327/149‑1 (MQ=255) atcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGttccttcc < 1:2331330/149‑1 (MQ=255) tcaaAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTtccttcct > 1:3919419/1‑149 (MQ=255) aaaGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAATTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGc < 2:562091/149‑1 (MQ=255) gTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTAc > 2:3661787/1‑149 (MQ=255) gTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTAc < 2:2860760/149‑1 (MQ=255) gTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTAc < 1:3348335/149‑1 (MQ=255) tCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACa < 2:4580438/149‑1 (MQ=255) tCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACa > 2:5083162/1‑149 (MQ=255) tCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACa < 2:2351317/149‑1 (MQ=255) cTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTACGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCATTACTGCTACAg > 2:4476579/1‑149 (MQ=255) tGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGt > 1:1195529/1‑149 (MQ=255) gTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGtt > 1:4429010/1‑149 (MQ=255) ctctTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTttatt > 1:3458235/1‑149 (MQ=255) ctctTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTttatt < 2:4438773/149‑1 (MQ=255) ttGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACg > 1:2909388/1‑149 (MQ=255) cAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCg > 1:2485988/1‑149 (MQ=255) cAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCg > 1:4150549/1‑149 (MQ=255) gACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTc > 2:3292878/1‑149 (MQ=255) gACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTc > 1:4269488/1‑149 (MQ=255) acaGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCAcc > 1:3036779/1‑149 (MQ=255) gagTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCgca > 2:1887687/1‑147 (MQ=255) gagTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGaa > 2:2480070/1‑149 (MQ=255) agTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAAc < 2:2022976/149‑1 (MQ=255) gtcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGc < 2:1946325/149‑1 (MQ=255) tcAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCa > 1:250977/1‑149 (MQ=255) cagcagACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCaa > 2:4698747/1‑149 (MQ=255) cagcagACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCaa > 2:4118917/1‑149 (MQ=255) gACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATAtt > 2:2494163/1‑149 (MQ=255) gACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATAtt > 1:3796858/1‑149 (MQ=255) aCTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTa > 2:1208363/1‑149 (MQ=255) cTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTAc < 1:4732075/149‑1 (MQ=255) cTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTAc < 1:4822306/149‑1 (MQ=255) cTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTAc > 2:3377715/1‑149 (MQ=255) ttCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACg > 2:5135555/1‑149 (MQ=255) ggATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCa > 1:2589463/1‑149 (MQ=255) ggATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCa < 2:4707868/149‑1 (MQ=255) tACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGcc < 1:1918643/149‑1 (MQ=255) gCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAAt < 2:3137659/149‑1 (MQ=255) tCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAg < 2:3551546/149‑1 (MQ=255) cAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGt < 1:4898910/149‑1 (MQ=255) aGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTg < 1:4290925/149‑1 (MQ=255) gCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGc < 2:427695/149‑1 (MQ=255) aaaTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTc > 2:2605069/1‑149 (MQ=255) aaTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTcc > 1:1379453/1‑149 (MQ=255) aaTTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTcc < 1:963678/149‑1 (MQ=255) gCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCt < 1:5048754/149‑1 (MQ=255) gCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCt < 1:1000732/149‑1 (MQ=255) tGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCttt > 2:3739091/1‑149 (MQ=255) tGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCttt < 1:3727146/149‑1 (MQ=255) tGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCttt > 1:1993016/1‑149 (MQ=255) tGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCttt < 2:4198189/149‑1 (MQ=255) ggaCCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCtttt < 1:4207695/147‑1 (MQ=255) cAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgt > 2:1001205/1‑149 (MQ=255) cAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgt < 2:4001918/149‑1 (MQ=255) aGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTtcgtc > 2:4804021/1‑149 (MQ=255) gCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGATTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCgg > 1:3071132/1‑149 (MQ=255) gTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTc < 2:2545476/149‑1 (MQ=255) gTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTc > 1:2084551/1‑149 (MQ=255) cACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAcc > 2:3805755/1‑149 (MQ=255) cACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAcc > 2:808129/1‑149 (MQ=255) cACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAcc > 2:4888209/1‑149 (MQ=255) aCGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAccc < 2:157938/149‑1 (MQ=255) aCGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAccc > 1:3619581/1‑149 (MQ=255) aCGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAccc < 1:3974889/149‑1 (MQ=255) aCGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAAccc > 2:1075899/1‑149 (MQ=255) cGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCt < 1:1679943/149‑1 (MQ=255) ggAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCtt > 2:4615390/1‑149 (MQ=255) ggTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGa < 1:1874008/149‑1 (MQ=255) tCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGata < 1:4110212/149‑1 (MQ=255) tGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATc < 2:2582317/149‑1 (MQ=255) gTCGCTCTGCGGCCAGCGTTTTAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCa > 2:2225678/1‑149 (MQ=255) tCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAg < 1:1037049/149‑1 (MQ=255) gCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGcc < 1:5178699/149‑1 (MQ=255) cGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGatca < 1:4582254/149‑1 (MQ=255) ggCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGatcat < 2:1280948/149‑1 (MQ=255) cGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGc < 1:3581745/149‑1 (MQ=255) ttttAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGccc < 1:722368/149‑1 (MQ=255) ttAATAGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTg > 2:3046390/1‑149 (MQ=255) tAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGt > 1:1751499/1‑149 (MQ=255) aTCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTc > 2:1469415/1‑149 (MQ=255) tCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCg > 1:2555935/1‑149 (MQ=255) tCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCg > 1:1011960/1‑149 (MQ=255) | AATTTTTCTGATTCAGGTGGTCAATCAAAGTCTGTTTCTCTTGTGCAGACACAGAGTCGTCAGCAGACTTCCGGATACCTGCATCAGCAAATTGCTGTACCAGGCGTTCCACGGAGGTCTGTCGCTCTGCGGCCAGCGTTTTAATCGTTACATCTGTCATGCTGTTCCTTCCTGCTACAGTTTATTACGCTTCGTCACCGAACCAGCAAATATTACGGGCAGCCATAATCAGTGCTCCGGCTTTTTCGTCGGTCAACCCTTCGATATCAGCCAGATCATCAATGCCCTGTTCG > CP009273/3309214‑3309506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |