| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,464,572 | G→T | 58.2% | intergenic (+38/‑107) | bdcR → / → tabA | transcriptional repressor for divergent bdcA/biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,464,572 | 0 | G | T | 58.2% | 91.5 / inf | 290 | intergenic (+38/‑107) | bdcR/tabA | transcriptional repressor for divergent bdcA/biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily |
| Reads supporting (aligned to +/- strand): ref base G (48/73); new base T (77/92); total (125/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.46e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
ACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC > CP009273/4464424‑4464720 | tGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATaa > 2:639745/1‑149 (MQ=255) aTGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGt < 1:3140257/149‑1 (MQ=255) aTGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGt < 2:3075931/149‑1 (MQ=255) aTGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGt < 1:1079262/149‑1 (MQ=255) tGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGtt < 2:4352635/149‑1 (MQ=255) tCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTtgt < 2:1379813/149‑1 (MQ=255) tCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTtgt > 1:1509370/1‑149 (MQ=255) cTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTtgtg < 2:42217/149‑1 (MQ=255) tGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGa > 2:290867/1‑149 (MQ=255) tGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGa < 1:3434945/149‑1 (MQ=255) tGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGa > 2:4237383/1‑149 (MQ=255) gggCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGAt < 2:3195714/149‑1 (MQ=255) gCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATaa < 2:2766416/149‑1 (MQ=255) cTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAACGCCTGCCTATAAGTTGTGATAAg > 2:353627/1‑149 (MQ=255) tttCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGa > 1:602993/1‑149 (MQ=255) tGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACaat > 2:1214272/1‑149 (MQ=255) tGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACaat < 2:972762/149‑1 (MQ=255) cGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACaataa < 1:3404141/149‑1 (MQ=255) aaGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAAtt > 2:4001432/1‑149 (MQ=255) gCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCAc > 2:213505/1‑149 (MQ=255) ggggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAg > 2:4967591/1‑149 (MQ=255) gggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTCAgg > 2:2394207/1‑149 (MQ=255) ggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGc < 2:1483813/149‑1 (MQ=255) ggCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGc < 1:4917000/149‑1 (MQ=255) cACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTa < 2:130304/149‑1 (MQ=255) aCTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAg < 2:1800669/149‑1 (MQ=255) tctATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCg > 1:1381591/1‑149 (MQ=255) tataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGa > 2:1610303/1‑149 (MQ=255) ataGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGaa < 2:3818047/149‑1 (MQ=255) gAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTg > 1:1077694/1‑149 (MQ=255) gAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTg > 1:2194040/1‑149 (MQ=255) gAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTg > 1:3696445/1‑149 (MQ=255) aacaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGa < 1:4772481/149‑1 (MQ=255) acaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGAt > 1:2415009/1‑149 (MQ=255) acaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGAt > 2:4934758/1‑149 (MQ=255) acaacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGAt > 2:2729137/1‑149 (MQ=255) caacTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGTCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGAtt < 1:1928887/149‑1 (MQ=255) acTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTAt < 1:3069412/149‑1 (MQ=255) ctctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATc < 2:487969/149‑1 (MQ=255) tctGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCt > 1:416936/1‑149 (MQ=255) cAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGt < 1:2422425/149‑1 (MQ=255) cAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGt < 2:4616562/149‑1 (MQ=255) cAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGt > 1:1259967/1‑149 (MQ=255) aaCAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGta < 1:1955083/149‑1 (MQ=255) gCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGAt < 1:5103882/149‑1 (MQ=255) gCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGAt > 1:3095494/1‑149 (MQ=255) cAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATa > 2:5082449/1‑149 (MQ=255) aaTGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAg < 1:2072888/149‑1 (MQ=255) aTGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGa > 2:1556151/1‑149 (MQ=255) aTGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGa > 1:1185735/1‑149 (MQ=255) tGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGaa > 1:3970710/1‑149 (MQ=255) cGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATg < 2:3442499/149‑1 (MQ=255) gggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGa > 2:371673/1‑149 (MQ=255) ggggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGaa < 1:4252808/149‑1 (MQ=255) gggAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAg > 1:3780854/1‑149 (MQ=255) gCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttg < 2:2180100/149‑1 (MQ=255) gCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttg < 1:2630289/149‑1 (MQ=255) cGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgt < 1:456180/149‑1 (MQ=255) gATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgtt > 2:2936968/1‑149 (MQ=255) aTAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGttt > 2:1901839/1‑149 (MQ=255) tAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt < 1:739093/149‑1 (MQ=255) tAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt < 2:4308623/149‑1 (MQ=255) aaaaCTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaa < 2:2541845/149‑1 (MQ=255) aaaCTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaat < 1:358652/149‑1 (MQ=255) aaCTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt < 1:2496873/149‑1 (MQ=255) cTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaattca > 2:588530/1‑147 (MQ=255) cTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaattaa > 1:4504740/1‑149 (MQ=255) aTTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAgg > 2:4669275/1‑149 (MQ=255) ttCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa < 1:3729349/149‑1 (MQ=255) cTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt > 1:2532556/1‑149 (MQ=255) gaggagTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGa > 2:1406493/1‑149 (MQ=255) gaggagTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGa > 2:4024634/1‑149 (MQ=255) gagTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGaaaa < 2:4406144/149‑1 (MQ=255) gTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAga < 1:86293/149‑1 (MQ=255) tGATGCGGGCCTTGACCCGAAAGGAGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgat < 1:3259512/149‑1 (MQ=255) gATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTTCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatg < 2:806909/149‑1 (MQ=255) aTGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatga > 2:4469073/1‑149 (MQ=255) tGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat < 2:332201/149‑1 (MQ=255) ggCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcatc > 2:2418402/1‑149 (MQ=255) ggCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcatc < 2:4544352/149‑1 (MQ=255) ggCCTAGACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGATAGCGGAATTGATAATCTATTCGTATAACGAAAGAAATGAATCGTTGATATCATTAAGGAGAGTAAAAGATGatcatc > 1:2865760/1‑149 (MQ=255) ttGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaa < 1:4384116/149‑1 (MQ=255) gACCCGAATGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAat > 2:10809/1‑149 (MQ=255) gACCCGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAat > 1:1688724/1‑149 (MQ=255) gACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAat < 2:3210311/149‑1 (MQ=255) cccGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGACatat > 2:3012751/1‑149 (MQ=255) ccGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAtt > 1:2245142/1‑149 (MQ=255) ccGAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAtt < 1:2963610/149‑1 (MQ=255) gAAAGGCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCa < 2:5200246/149‑1 (MQ=255) ggCGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt < 1:4974629/149‑1 (MQ=255) cGGGAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCt < 2:3790187/149‑1 (MQ=255) gggAAAGCGCCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCtt < 1:4305551/149‑1 (MQ=255) gggAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCtt < 2:2105193/149‑1 (MQ=255) gAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCa > 1:5235803/1‑149 (MQ=255) cgcCTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt < 1:618429/149‑1 (MQ=255) gcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTg < 1:101870/149‑1 (MQ=255) cTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc > 2:57151/1‑149 (MQ=255) cTGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc < 1:4607644/149‑1 (MQ=255) tGCCTATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCt < 2:3417148/149‑1 (MQ=255) cGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc < 1:3502478/149‑1 (MQ=255) | ACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGATGCGGGCCTTGACCCGAAAGGCGGGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC > CP009273/4464424‑4464720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |