| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 486,021 | A→C | 8.2% | L83R (CTG→CGG) | priC ← | primosomal replication protein N'' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 486,021 | 0 | A | C | 8.2% | 1288.8 / 97.0 | 403 | L83R (CTG→CGG) | priC | primosomal replication protein N'' |
| Reads supporting (aligned to +/- strand): ref base A (184/186); new base C (15/18); total (199/204) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 404 total aligned reads displayed.
CGGGCTCTGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTGTCGAA > CP009273/485874‑486169 | cGGGCTCTGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAg > 2:1838347/1‑149 (MQ=255) gggCTCTGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTTCACTGTCCCACTCGCGCTCTGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGt < 1:4029577/149‑1 (MQ=255) tGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTgcc > 2:1953436/1‑149 (MQ=255) tGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTgcc > 2:2243025/1‑149 (MQ=255) tGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTgcc < 2:549082/149‑1 (MQ=255) gCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTgccg > 2:477234/1‑149 (MQ=255) cGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGa > 2:2601544/1‑149 (MQ=255) gCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATg > 2:3703438/1‑149 (MQ=255) aCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTc > 1:764392/1‑149 (MQ=255) aCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTc > 1:1460247/1‑149 (MQ=255) aCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGATGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTc > 1:1153490/1‑149 (MQ=255) tcACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCgccag > 2:3488270/1‑149 (MQ=255) aCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCgccagcc > 2:832488/1‑149 (MQ=255) cGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCgccagcca < 2:4796156/149‑1 (MQ=255) tAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAgg > 1:2573598/1‑149 (MQ=255) aGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGc < 1:345304/149‑1 (MQ=255) aGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGc > 1:2040946/1‑149 (MQ=255) gccgcTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACt > 2:2339680/1‑149 (MQ=255) gccgcTCAAAATCCTGATGCTGAATACGTGTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACt < 2:654662/149‑1 (MQ=255) ccgcTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACtt < 2:4319451/149‑1 (MQ=255) cgcTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTg > 1:2380393/1‑149 (MQ=255) cgcTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTg > 1:2685803/1‑149 (MQ=255) cAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGc > 2:2859665/1‑149 (MQ=255) aaaTCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAg > 2:4479504/1‑149 (MQ=255) aaaTCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAg > 2:3411594/1‑149 (MQ=255) aaTCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGc < 1:2519785/149‑1 (MQ=255) tCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTg > 2:2659143/1‑149 (MQ=255) ccTGATGCTGAATACGTGTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGt < 1:4646509/149‑1 (MQ=255) cTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGtt < 1:2279836/149‑1 (MQ=255) cTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGtt < 1:3708815/149‑1 (MQ=255) tGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTtg < 1:5014536/149‑1 (MQ=255) aTGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTtgct > 2:3657374/1‑149 (MQ=255) aTGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTtgct > 1:2769644/1‑149 (MQ=255) aTGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTtgct > 1:143065/1‑149 (MQ=255) aTGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTtgct > 2:565050/1‑149 (MQ=255) tGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTc > 2:2897707/1‑149 (MQ=255) tGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTc > 2:1852635/1‑149 (MQ=255) aaTACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCaa > 1:4822985/1‑149 (MQ=255) aTACGTTGACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAAc < 1:4688217/149‑1 (MQ=255) tACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACt > 1:3415091/1‑149 (MQ=255) tACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCACCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACt > 1:2807556/1‑149 (MQ=255) cGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGc < 1:1684562/149‑1 (MQ=255) gTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCa < 2:3994160/149‑1 (MQ=255) aCGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGAc > 2:1341665/1‑149 (MQ=255) aCGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGAc < 1:1032427/149‑1 (MQ=255) aCGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGAc > 1:4319066/1‑149 (MQ=255) gCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGa > 1:3078353/1‑149 (MQ=255) cTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGaa < 2:4930039/149‑1 (MQ=255) cTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGaa < 2:4665620/149‑1 (MQ=255) cAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAgcgc > 1:1005481/1‑149 (MQ=255) gCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAg < 2:1108587/149‑1 (MQ=255) cGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGc < 1:2944806/149‑1 (MQ=255) gggCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGcc > 1:904747/1‑149 (MQ=255) aTTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGAtt < 2:4548407/149‑1 (MQ=255) aTTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGAtt < 2:1700579/149‑1 (MQ=255) ttttCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTa < 2:4271456/149‑1 (MQ=255) ttttCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTa < 2:2490116/149‑1 (MQ=255) tttCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTAt < 1:3877689/149‑1 (MQ=255) cGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATcgc < 1:3204005/149‑1 (MQ=255) gtggtgCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATcgccc < 1:2950477/149‑1 (MQ=255) tggtgCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATcgcccg > 1:2893987/1‑149 (MQ=255) gtgCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATcgcccgcc < 1:4085666/149‑1 (MQ=255) tgCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCt < 1:3758773/149‑1 (MQ=255) gCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCtc < 1:4576968/149‑1 (MQ=255) gCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCtc < 1:1962204/149‑1 (MQ=255) tGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCtcgtcg > 1:3631874/1‑149 (MQ=255) gTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCga < 1:4227777/149‑1 (MQ=255) ccACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGAc > 2:2774004/1‑149 (MQ=255) cTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCCTGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAg < 2:3195224/149‑1 (MQ=255) cTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAg < 1:3805545/149‑1 (MQ=255) tCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGc < 1:4871853/149‑1 (MQ=255) tCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGc < 2:764392/149‑1 (MQ=255) cgcAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACACGCCTg < 2:4089600/149‑1 (MQ=255) gcAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGt < 1:2481049/149‑1 (MQ=255) aaTGTCCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCACCTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAg < 2:5029644/149‑1 (MQ=255) gACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAgtgt < 1:532817/149‑1 (MQ=255) cAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGtgttgt < 2:1562975/149‑1 (MQ=255) aGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTc > 2:3726468/1‑149 (MQ=255) aGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCAACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTc < 2:4137103/149‑1 (MQ=255) gCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGc > 2:1031236/1‑149 (MQ=255) aGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGa > 2:4980344/1‑149 (MQ=255) gCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGt > 2:3126878/1‑149 (MQ=255) gCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGt < 1:4503432/149‑1 (MQ=255) cTTCACGCGCGATGGCTTCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTc > 1:1243056/1‑149 (MQ=255) cTTCACGCGCGATGGCTTCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTc > 1:2977478/1‑149 (MQ=255) cTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTc < 2:3057236/149‑1 (MQ=255) ttCACGCGCGATGGCTTCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCt < 2:2929452/149‑1 (MQ=255) tCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTg < 2:4373641/149‑1 (MQ=255) tCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTg > 2:2078580/1‑149 (MQ=255) gcgATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAg > 1:5224814/1‑149 (MQ=255) gcgATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAg < 1:1280094/149‑1 (MQ=255) gcgATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAg > 1:3344270/1‑149 (MQ=255) gATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGAt < 1:3272583/149‑1 (MQ=255) ggCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAACAGATGcc < 1:4427396/149‑1 (MQ=255) ggCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGcc < 1:1813416/149‑1 (MQ=255) cTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTg > 2:4869163/1‑149 (MQ=255) ttCCCGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTGt < 2:3776456/149‑1 (MQ=255) ttCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTGt > 2:4416684/1‑149 (MQ=255) ttCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTGt < 2:1183027/149‑1 (MQ=255) tCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTGTc < 1:2187172/149‑1 (MQ=255) | CGGGCTCTGCGTTCGGCAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTCGCGCAATGACCAGGCGGAGGCTTCACGCGCGATGGCTTCCAGTTGTGCCGCCAGATGTTCCGCCAGCCAGGCCACTTGCGGCAGCTGTTGCTGCTCAACTGCATGACGAAGCGCAGCCAGATTATCGCCCGCCTCGTCGAGACAAGCCTGTAGTGTTGTCGCACGAGTCTGAAAAAGATGCCTGTCGAA > CP009273/485874‑486169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |