| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,100,755 | C→T | 5.4% | V352V (GTG→GTA) | glf ← | UDP‑galactopyranose mutase, FAD/NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,100,755 | 0 | C | T | 5.4% | 739.5 / 19.9 | 223 | V352V (GTG→GTA) | glf | UDP‑galactopyranose mutase, FAD/NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base C (95/116); new base T (3/9); total (98/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 | |||||||||||
Only 100 of 225 total aligned reads displayed.
GAAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACTTTCC > CP009273/2100606‑2100903 | aGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCAc < 2:2297778/150‑1 (MQ=255) gatgatATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACt > 2:2354644/1‑150 (MQ=255) atgatATTAACGCATACGGCTGTATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACtt < 2:2396384/150‑1 (MQ=255) atTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGc > 1:1463682/1‑150 (MQ=255) atTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCAGTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGc > 2:3845755/1‑150 (MQ=255) tAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCat < 1:683187/150‑1 (MQ=255) aaCGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCata < 1:614821/150‑1 (MQ=255) gCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCa > 1:4535238/1‑150 (MQ=255) gCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATAtt < 2:1855190/150‑1 (MQ=255) gCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATAtt < 1:1487364/150‑1 (MQ=255) tGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTta > 2:4253017/1‑150 (MQ=255) aTAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATAc > 2:1087826/1‑150 (MQ=255) tAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACt < 1:3135614/150‑1 (MQ=255) tAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACt < 2:455875/150‑1 (MQ=255) aaaaTATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTc > 1:758320/1‑150 (MQ=255) aaaTATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCg > 2:2858882/1‑150 (MQ=255) tatatCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGcc > 2:215460/1‑150 (MQ=255) tatatCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGcc < 1:2835722/150‑1 (MQ=255) ccTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAAcg < 1:3569197/150‑1 (MQ=255) tAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAAcgcccgcc > 2:2738243/1‑150 (MQ=255) aGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCaa > 1:2513662/1‑150 (MQ=255) atatAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAat > 2:3273708/1‑150 (MQ=255) tataAACATATAAATGCTTTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAata < 1:91357/150‑1 (MQ=255) tataAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAata > 2:3749519/1‑150 (MQ=255) aaaCAGATAAATGCTGTAATGTGAAAGACACTAATTACAATATATATCATTAATCCTTACTATTTATATTTTTCACTTGATAAATAGCGGCTTATATCACTTTATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATaa < 1:4834010/150‑1 (MQ=255) aaaCAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATaa < 2:3448431/150‑1 (MQ=255) aaaCAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATaa > 1:1596199/1‑150 (MQ=255) cAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCt > 1:234047/1‑150 (MQ=255) aGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCtt < 1:1223448/150‑1 (MQ=255) gATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATCTAACCTTg > 2:4050098/1‑150 (MQ=255) tAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGtc > 1:43095/1‑150 (MQ=255) tAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGtc > 1:3085484/1‑150 (MQ=255) tAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGtc < 1:1993170/150‑1 (MQ=255) aTGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGtcttc < 2:1180688/150‑1 (MQ=255) aTGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGtcttc > 2:198731/1‑150 (MQ=255) gatGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTtctc < 2:3346128/148‑1 (MQ=255) gCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTTATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTtctc < 1:126513/150‑1 (MQ=255) gCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTtctc < 1:4838077/150‑1 (MQ=255) gCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTtctc < 1:2742655/150‑1 (MQ=255) tGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTg < 2:5139273/150‑1 (MQ=255) aaTGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgcta > 1:2763540/1‑150 (MQ=255) aTGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctag < 2:2379523/150‑1 (MQ=255) tGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctagc < 1:3515489/150‑1 (MQ=255) tGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctagc > 2:4268021/1‑150 (MQ=255) agaAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctagcta < 2:4531140/150‑1 (MQ=255) gaAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTaa > 1:1154617/1‑150 (MQ=255) gaAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTaa > 1:1154666/1‑150 (MQ=255) aaaGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATCACCTTGTCTTCTCTGCTAGCTAAc > 1:4726348/1‑150 (MQ=255) aaGACACTAATTACAAGAGAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGAGATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAAct < 1:3372460/150‑1 (MQ=255) acacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctc > 2:3038858/1‑150 (MQ=255) acacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctc < 1:3772136/150‑1 (MQ=255) cacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctct < 1:1075679/150‑1 (MQ=255) cacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctct < 1:3105407/150‑1 (MQ=255) acTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCta > 2:2680162/1‑150 (MQ=255) tAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCtata < 2:1441241/150‑1 (MQ=255) aTTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATAtt < 1:1616749/150‑1 (MQ=255) aCAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCt > 1:1031492/1‑150 (MQ=255) cAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCtt < 2:4796070/150‑1 (MQ=255) cAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCtt < 1:3510064/150‑1 (MQ=255) agatagatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTaa > 2:4709104/1‑150 (MQ=255) tagatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTCTATTTCTTaaaaa > 2:845935/1‑150 (MQ=255) tagatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTaaaaa < 1:3410459/150‑1 (MQ=255) agatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAg < 1:1942756/150‑1 (MQ=255) gatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAAATCTCTATATTTCTTaaaaatc > 2:1552673/1‑148 (MQ=255) cATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTcc < 1:1566197/150‑1 (MQ=255) aTTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCa > 2:3195604/1‑150 (MQ=255) aTTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCa > 1:2190854/1‑150 (MQ=255) ttAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCAt < 2:3687771/150‑1 (MQ=255) tAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATTCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATg > 2:2826082/1‑150 (MQ=255) ccGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGtttt > 1:540929/1‑150 (MQ=255) aCTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTttatt > 1:239320/1‑150 (MQ=255) aCTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTttatt < 2:2987676/150‑1 (MQ=255) cTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTttatta > 1:1851823/1‑150 (MQ=255) tCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCANTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTtattat > 1:4787686/1‑150 (MQ=255) tCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTtattat < 1:623670/150‑1 (MQ=255) ttATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCAt > 1:2287993/1‑150 (MQ=255) tataTTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCAtt > 1:4363202/1‑150 (MQ=255) atTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAAc < 1:4627726/150‑1 (MQ=255) tttttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACt < 1:1669012/150‑1 (MQ=255) tttttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACt < 2:4307370/150‑1 (MQ=255) ttttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTg < 1:1729029/150‑1 (MQ=255) ttttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTg > 1:830263/1‑150 (MQ=255) tttCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTgg > 1:5103894/1‑150 (MQ=255) tttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTgg > 2:3568611/1‑150 (MQ=255) ttGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGAtagta > 1:3878845/1‑150 (MQ=255) aTAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAggg > 1:690375/1‑150 (MQ=255) aaGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtc < 1:4253017/150‑1 (MQ=255) aaGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtc < 2:1898960/150‑1 (MQ=255) aaGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtc < 2:206324/150‑1 (MQ=255) aaGAGCGGCAGATATCACATGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtc < 1:3757362/150‑1 (MQ=255) agagCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcg < 1:569299/150‑1 (MQ=255) agagCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcg < 1:484665/150‑1 (MQ=255) gagCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCGGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcgt > 2:791992/1‑150 (MQ=255) agCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcgtc < 1:4591498/150‑1 (MQ=255) agCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcgtc < 1:4709104/150‑1 (MQ=255) ggCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGcc < 1:4107929/150‑1 (MQ=255) tatCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACttt < 2:1206738/150‑1 (MQ=255) tatCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACttt > 2:667426/1‑150 (MQ=255) tatCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACttt > 2:2193907/1‑150 (MQ=255) atCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACTTTc > 1:4899864/1‑150 (MQ=255) | GAAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACTTTCC > CP009273/2100606‑2100903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |