| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,713 | C→A | 27.9% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,713 | 0 | C | A | 27.9% | 284.0 / 34.5 | 194 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (49/75); new base A (45/16); total (103/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 200 total aligned reads displayed.
GTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATG > CP009273/2170564‑2170859 | gTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTc < 2:3469104/150‑1 (MQ=255)gTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTc < 1:3022080/150‑1 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCa < 1:4640559/150‑1 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCa < 2:3095657/150‑1 (MQ=255) ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCa < 2:3095680/150‑1 (MQ=255) tGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTaaa > 2:649982/1‑150 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:1497834/150‑1 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGTTTTAaaaaaa > 1:1483802/1‑148 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATaa > 2:1327290/1‑150 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 1:773376/150‑1 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAAt < 2:4013450/150‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGaaa < 2:5075758/150‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTAAAAATATaaataaa > 1:2629973/1‑145 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATGaaag > 2:3525824/1‑149 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAattatt < 1:3915799/150‑1 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATTAAaatatt > 1:4206090/1‑150 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTg < 2:908908/150‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAAATATtttttt > 2:1884503/1‑150 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGttttt < 1:3756246/150‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTaa > 2:1684028/1‑150 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATATAATTAAAATATTTTTTTTTAAat > 2:1914318/1‑150 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAatat < 1:3637281/150‑1 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAAATAAAATATTTTTTTTTAAatata > 2:4059725/1‑149 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATAga > 2:3704782/1‑150 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAga > 2:3704731/1‑150 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgaga < 2:1131649/150‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCgaga > 2:2530264/1‑150 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAgaga > 2:1501398/1‑150 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATTTAATTATTTTTTTTTTAATATctata > 2:938581/1‑146 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATa < 2:4837478/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAATTAAATTATTTTTTTTTTAAATTAGAGATa > 2:1610438/1‑150 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATTAAATTATTTTTTTTTTTATATAGatatt > 2:4205422/1‑149 (MQ=255) tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑a > 2:2843075/1‑150 (MQ=255) tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTGAAAATATAATGAAATTATTTGTTTTTATATATCGAGGTAAcca > 2:122587/1‑148 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAAc < 2:2190953/150‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTGAAAATATAATGAAATTATTTGTTTTTTAATATTGCGGTTACG‑ATACAAAAAAAGACaa > 1:3343937/1‑150 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAATTAAATTATTTGTTTTTTAATTTAGAGATAACG‑ATCACAAAAACggaaa > 1:2517088/1‑146 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTGAAAATATAAATAAAATATTTTTTTTTTAATATAGAGAGAAAG‑ATAAAAAAAAACACaa > 1:683401/1‑150 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTGGATTTAAAAAAATAATGAAATTATTTTTTTTTAAATATAGAGATAAAG‑ATAAAAAAAAcaaaaaa > 1:791947/1‑144 (MQ=255) aCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATAACAAAAACGACAatat > 2:417903/1‑150 (MQ=255) ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGAAAAAATg > 2:3746844/1‑150 (MQ=255) cGCATAACCGCCGCGCTGTGCTTTGTTCAGCATCTGATTTGTCGATACCACTTAAATTTTCATATCCTGTCTTTTGTTTTCTATTTAAAAATATAATTAAATTTTTTTTTTTTAAATTTCGAGATAACT‑AACACAAAAACGACAATATGa < 1:304200/150‑1 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATACAAAGAAATTATTTTTTTTTTAATATAGAGATAACC‑ATCACAAAAACGACAaaatta > 2:548011/1‑148 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATAAAG‑ATCAAAAAAACCACAaaatta > 2:4993685/1‑148 (MQ=255) gaaTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTACAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGaa < 2:4629619/148‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATAGAGATAACG‑ATCAAAAAAACGACAATATGaa > 2:3389506/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGTATTTAAAAATATAATTAAATTATTTTTTTTTTAATTTAGAGATAACG‑ATAACAAAaaagaaaaaaagaaaa > 1:4913081/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATATAATTAAATTAATTTTTTTTAAAAATAGAGATAAAC‑AAAAAAAAAAAGACAATATGtaaaa > 1:2552838/1‑149 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATGAAAat < 2:660630/150‑1 (MQ=255) acccgccgCGCTGTGCGTGGTTCAGCATCTGCTTTGTCTATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAatt < 2:4547788/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATTAAG‑ATCACAAAAACCAACATATGaaaaat > 2:4068789/1‑148 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAatt < 2:2577624/150‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTAAAAAAAAAAATTAAATATTTTTTTTTTAATATAGAGAAAAAGAAACAAAAAAAC‑ACAATAAGAAAatt > 1:483612/1‑150 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAATATAAAAATAAATTATTTTTTTTTTAATATAGAGAGTGAG‑ATAAAAAAAAAAACAAAATGAAAata > 1:623399/1‑149 (MQ=255) cgccgcGCTGTGGGTTGTTCATCATCTGCTTTGTCTATACCACGTACATTTTCATAGCCGGTCGTTTGTTTTCGATTTAAAAATATAATGAATTTTTTTGTTTTTAAATTTCGATAAACCG‑ATCAAAAAAACGACAATATGAAAattatt < 2:29411/150‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTc < 2:2430455/150‑1 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTAAAAAAAAAATTAAAATATTTTTTTTTAAAAATAGAGATAACC‑ATCAAAAAAAAGACAAAAAGAAAaatattag > 1:4997265/1‑148 (MQ=255) gcgcTTGGCTTTGTTCAGCTTCTGCTTTGTCGATACCACGTACTTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATATTGAAATTATTTGTTTTTAAATATCGTGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCgag < 2:5005400/150‑1 (MQ=255) tgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAGAGATAACG‑ATCACAAAAACCACAATATGAAAATTATTAGAGGAGTGa > 2:100118/1‑150 (MQ=255) gCGTTTTTCACCATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACT‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 2:1483802/150‑1 (MQ=255) gCGTTGTTCAGCATCTGCTTTGTCTATCCACCGTACATTTTCATAGCCTGTCTTTTGTTTTCGATTACAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACT‑AACACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 1:4100747/150‑1 (MQ=255) ctttttacAGAATCTGTTTTGTCTATCCCCCTTAATTTTTAATACCCTGTCTTTTTTTTTCTTTTACAAAATATAATTAAATTATTTTTTTTTAAATATCTATATAACT‑ATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGaaa < 1:932968/143‑1 (MQ=255) cGTTGTTCAGCATCTGCTGTGTCTATACCCCTTAAATTTTCATATCCGGTCGTTTGTTTCCGATTTCAAAATATAATGAAATTTTTTGTTTTTAAATATCGAGAAAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaaa < 2:1796984/150‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTAAAAATATAATGAAATTATTTGTTTTTTAATATAGAGATTAAG‑ATAACAAAAACGACAATATTAAAATTATTAGATGAGTGAAAgg > 2:4430569/1‑150 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAAATATTTGTTTTTAAATATAGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTAGAGGAGTGAAAgg > 2:2995201/1‑150 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAAAGAAATTAATTTTTTTTAAAAATCAAGATAAAG‑AACACAAAAACCACAAAATTAAAAATATTAGAGGAGTGAAAgg > 2:257112/1‑150 (MQ=255) catcATGTGCTTTTTCGATACCACGTAATTTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATATAATTAATTTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaa < 1:4082257/147‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTAAAAAAATAAATAAAATATTTTTTTTTTAATATCGATATAAAC‑ATAAAAAAAACCACAAAAAGAAAATAATTAGATGTGTGAAATGCaaaaaa > 1:3130504/1‑150 (MQ=255) tttGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAATATAAAGAAATTATTTTTTTTTTAAAATAGAGTTAAAG‑ATCACAAAAAAGAAAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAAGGCCTc > 1:4754450/1‑150 (MQ=255) ttGTCGCTACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 2:167417/150‑1 (MQ=255) tGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTAAAAATATAATGAAATTATTTTTTTTAAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:4730242/150‑1 (MQ=255) ggTCGATCCCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTACAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:4450735/149‑1 (MQ=255) gTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCg < 2:4336193/150‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTATGTTTGAAAAAAAAATTAAAATATTTTTTTTTTAAAATAGAGATTAAG‑AAAACAAAAAAAACAAAATTAAAAATATTAGGGGAGTGAAAGGCAAAAAAAAAGCCAcccca > 1:1715589/1‑148 (MQ=255) gATACCCCGTACATTTACATATCCTGTCGTTTGTTTTCTATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa < 2:2411473/150‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTGAAAATATAATGAAAATATTTTTTTTTATATTTAGAGTTAAAG‑ATCACAAAAAAGACCAAATTTAAATTATTAGAGGAGTGTAAGGGAAAATAAAGGCCAACCGaga > 2:2455146/1‑148 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTTAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa > 2:3435363/1‑150 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTGGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa < 2:2411460/150‑1 (MQ=255) caattACATTTTAATATCCTTTCGTTTTTTTTCTATTACAAAATATAATCAAATTATTTGTTTTTAAATATCTATATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 1:4196509/146‑1 (MQ=255) ttACTTTTTCATACCCTGTCTTTTGTTTTCTATTACAAAATATAATTAAATTATTTTTTTTAAAATTTCGTGATAACG‑ATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 1:1091433/149‑1 (MQ=255) tACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAATGAAATTATTTTTTTTTTAATATAGGGAGAACG‑ATAACAAAAAAGACAAAATGGAAATTATTAGAGGGGGGGAAGGCAAAAAAAAGGCCGCCCCGGAGGGGAGCCg > 2:2326676/1‑150 (MQ=255) cATTTTCATATCCTGTCTTTTGTTTTCTATTTAAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACT‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:923053/150‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTCGATTACAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:2234500/150‑1 (MQ=255) tttCATACCCTGTCTTTTGTTTTCTATTAAAAAATATAATTAAATTTTTTGTTTTAAAATATCGATATAACT‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCa < 1:502251/150‑1 (MQ=255) ttCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:4760798/150‑1 (MQ=255) tCATCTCCTGTCTTTTTTTTTCTATTTAAAAATATAATCAAATTATTTTTATTTAATTATCTATATAACT‑AACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 1:1811907/150‑1 (MQ=255) tCATATCCTGTCGTTTGTTTTGGTTTTGAAAATATAATGTAATTATTTTTTTTTAAATATGGCAATTAAG‑ATGACAAAAACGAACAAATGTACAATTTTAGAGGGGTGTAAGGCCAAAAAAAGGCCTACCGAGAGGGGAGCCggtgcaca > 2:4942165/1‑143 (MQ=255) tatCCTGTCTTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 2:4486088/150‑1 (MQ=255) tGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 2:691569/1‑150 (MQ=255) gTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:1994879/1‑150 (MQ=255) cGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:3664449/1‑150 (MQ=255) cGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 2:4950602/1‑150 (MQ=255) tttgtttTCGATTTCAAAATATAATGAATTTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:4057063/150‑1 (MQ=255) ttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt > 2:3284298/1‑150 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:1366024/1‑150 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:4151258/1‑150 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:334106/1‑150 (MQ=255) ttttAAAAATATAATTAATTTATTTGTTTTTAAATATCGATATACCG‑ATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:1914318/149‑1 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 1:4311935/150‑1 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 1:2437163/1‑150 (MQ=255) | GTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATG > CP009273/2170564‑2170859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |