| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,749 | G→T | 8.9% | intergenic (‑66/+242) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,749 | 0 | G | T | 8.9% | 396.4 / 4.8 | 182 | intergenic (‑66/+242) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (91/65); new base T (4/21); total (96/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.47e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 194 total aligned reads displayed.
GAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATA > CP009273/2170600‑2170898 | gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTGAAAATATAAATTAAATATTTTTTTTTTAATATagag > 1:98846/1‑150 (MQ=255)gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgag > 2:402059/1‑150 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCgaga < 2:1131649/150‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATAgaga > 2:1501398/1‑150 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATa < 2:4837478/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAATTAAATTATTTTTTTTTTAAATTAGAGATa > 2:1610438/1‑150 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATTAAATTATTTTTTTTTTTATATAGatatt > 2:4205422/1‑149 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGAATTCAAAATATAAATAAAATATTTTTTTTTAAATATAAAGATaaa > 2:923154/1‑149 (MQ=255) tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑a > 2:2843075/1‑150 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATcaca < 1:547227/150‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAAc < 1:1336637/150‑1 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAATTAAATTATTTGTTTTTTAATTTAGAGATAACG‑ATCACAAAAACggaaa > 1:2517088/1‑146 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGGTTTAAAAATATAAATAAATTATTTTTTTTTAAATATAGAGATAAAG‑ATAACAAAAAAGaaaaa > 2:1819926/1‑149 (MQ=255) ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGAAAAAATg > 2:3746844/1‑150 (MQ=255) cGCATAACCGCCGCGCTGTGCTTTGTTCAGCATCTGATTTGTCGATACCACTTAAATTTTCATATCCTGTCTTTTGTTTTCTATTTAAAAATATAATTAAATTTTTTTTTTTTAAATTTCGAGATAACT‑AACACAAAAACGACAATATGa < 1:304200/150‑1 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAAATATTTGTTTTTAAATATAGAGATAACC‑ATCACAAAAACGACAATATGa > 2:4994232/1‑150 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATTAAATTATTTTTTTTTTAATATCGAGATAACG‑ATAACAAAAAAGACAATATGaa > 2:3389557/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGTATTTAAAAATATAATTAAATTATTTTTTTTTTAATTTAGAGATAACG‑ATAACAAAaaagaaaaaaagaaaa > 1:4913081/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATATAATTAAATTAATTTTTTTTAAAAATAGAGATAAAC‑AAAAAAAAAAAGACAATATGtaaaa > 1:2552838/1‑149 (MQ=255) acccgccgCGCTGTGCGTGGTTCAGCATCTGCTTTGTCTATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAatt < 2:4547788/148‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAatt < 2:4547461/150‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAatt < 2:2577624/150‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATAGAGATAAAG‑ATCACAAAAAACACAatatttaaaat > 2:4955890/1‑143 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGTTTTAAAAAAAAAAATTAAATATTTTTTTTTTAATATAGAGAAAAAGAAACAAAAAAAC‑ACAATAAGAAAatt > 1:483612/1‑150 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTc < 2:2430455/150‑1 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAAATAATTAAATTATTTTTTTTTAAATATCGAGGTAAAG‑ATAAAAAAAAAGACAAAAATAAAattattag > 1:4187335/1‑148 (MQ=255) gcgcTGTGCGTTGTTCAGCATCGGCTTTGTCGATACCACTTACATTTTCATAGCCGGGCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCgag < 2:5005417/150‑1 (MQ=255) gCGTTTTTCAGCATCTGCTTTGTCGATACCACGTACATTTTACTACCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 1:4100741/150‑1 (MQ=255) gCGTTTTTCACCATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACT‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 2:1483802/150‑1 (MQ=255) gCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaa < 2:4079527/150‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTAAAAATATAATGAAATTATTTGTTTTTTAATATAGAGATTAAG‑ATAACAAAAACGACAATATTAAAATTATTAGATGAGTGAAAgg > 2:4430569/1‑150 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATGAAAATATTTGTTTTTAAATATAGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTAGAGGAGTGAAAgg > 2:2995201/1‑150 (MQ=255) ttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAAAGAAATTAATTTTTTTTAAAAATCAAGATAAAG‑AACACAAAAACCACAAAATTAAAAATATTAGAGGAGTGAAAgg > 2:257112/1‑150 (MQ=255) catcATGTGCTTTTTCGATACCACGTAATTTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATATAATTAATTTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCaaaa < 1:4082257/147‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTAAAAAAATAAATAAAATATTTTTTTTTTAATATCGATATAAAC‑ATAAAAAAAACCACAAAAAGAAAATAATTAGATGTGTGAAATGCaaaaaa > 1:3130504/1‑150 (MQ=255) agcTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:655717/148‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTACAAAATATAATGAATTTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 1:2615420/150‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAAAAATAAAATATTTTTTTTTAAATATAGAGATAAAC‑AAAACAAAAACCAAAAAATTAAAAATATTAGAGGGGGGAAATGCaaaaaaaa > 1:4245482/1‑149 (MQ=255) tgttttGTCTATACCACGTACTTTTTCATTTCGTGTGGTTTTTTTTCGATTTAAAAATATACTTAATTTTTTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGAC‑ATATTAAATTTTTTCGTGGTGTGAAAGGCAAAAAAACGGcc < 2:2458729/147‑1 (MQ=255) attttTCTATCCCACTTAATTTTTCTTCTCGTGTCGTTTGTTTTCTTTTTAAAAATATAATTAAATTTTTTTTTTTTAAATATCTATATAACG‑ACCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCt < 2:2208575/149‑1 (MQ=255) tttttggATACCACGTAAATTTTCATATCCTGTATTTTTTTTTCTATTTAAAAATATATTTAATTTTTTTTTTTTTAAATATCTAGATAACT‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTc < 1:854616/144‑1 (MQ=255) ttGTCGCTACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTcc < 2:167417/150‑1 (MQ=255) tGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:4730164/150‑1 (MQ=255) ggTCGATCCCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTACAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTccc < 2:4450735/149‑1 (MQ=255) gTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCg < 2:4336193/150‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTATGTTTGAAAAAAAAATTAAAATATTTTTTTTTTAAAATAGAGATTAAG‑AAAACAAAAAAAACAAAATTAAAAATATTAGGGGAGTGAAAGGCAAAAAAAAAGCCAcccca > 1:1715589/1‑148 (MQ=255) gATACCCCGTACATTTACATATCCTGTCGTTTGTTTTCTATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa < 2:2411473/150‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTGAAAATATAATGAAAATATTTTTTTTTATATTTAGAGTTAAAG‑ATCACAAAAAAGACCAAATTTAAATTATTAGAGGAGTGTAAGGGAAAATAAAGGCCAACCGaga > 2:2455146/1‑148 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTGGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa < 2:2411460/150‑1 (MQ=255) cGTACAGTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACCACAAAATGAAAATTATTCGAGGAGTGAAAGGGAAAAAAACGGCCACCCGATAGGGAAGc > 2:198750/1‑150 (MQ=255) ttACTTTTTCATACCCTGTCTTTTGTTTTCTATTACAAAATATAATTAAATTATTTTTTTTAAAATTTCGTGATAACG‑ATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 1:1091433/149‑1 (MQ=255) taaaTTTTATTAACCTGTCGTTTTTTTTCTATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCTATATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCg < 1:4702978/147‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:5089904/150‑1 (MQ=255) tttCATACCCTGTCTTTTGTTTTCTATTAAAAAATATAATTAAATTTTTTGTTTTAAAATATCGATATAACT‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCa < 1:502251/150‑1 (MQ=255) ttCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:4760798/150‑1 (MQ=255) tCATCTCCTGTCTTTTTTTTTCTATTTAAAAATATAATCAAATTATTTTTATTTAATTATCTATATAACT‑AACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 1:1811907/150‑1 (MQ=255) tCATATCCTGTCGTTTGTTTTGGTTTTGAAAATATAATGTAATTATTTTTTTTTAAATATGGCAATTAAG‑ATGACAAAAACGAACAAATGTACAATTTTAGAGGGGTGTAAGGCCAAAAAAAGGCCTACCGAGAGGGGAGCCggtgcaca > 2:4942165/1‑143 (MQ=255) tatCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg < 2:1897269/150‑1 (MQ=255) cGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:3664399/1‑150 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 2:4057296/150‑1 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAATAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 2:1705426/1‑150 (MQ=255) tttttttCTATTTCAAAATTTTATGAATTTTTTTTTTTTTATATATAGCTTTAACG‑ATCACAAAAACTACAATATGAAAATTATTCGATGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:749606/147‑1 (MQ=255) ttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt > 2:677954/1‑150 (MQ=255) ttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt > 2:3284298/1‑150 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:1366024/1‑150 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAATAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:4151275/1‑150 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc < 2:354691/150‑1 (MQ=255) tCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:2141637/1‑150 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:334128/1‑150 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:3730797/1‑150 (MQ=255) ttttAAAAATATAATTAATTTATTTGTTTTTAAATATCGATATACCG‑ATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:1914318/149‑1 (MQ=255) tttaaaaaaTATAATTAATTTTTTTTTTTTTAAATATCGATATAACG‑AACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:1363413/145‑1 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 1:2437163/1‑150 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 1:4311935/150‑1 (MQ=255) tttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 2:4735872/150‑1 (MQ=255) aaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 1:457399/1‑150 (MQ=255) aaTGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:2517260/1‑150 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 2:3609720/1‑150 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:4222261/150‑1 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGACAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:2201009/1‑150 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:2804688/1‑150 (MQ=255) attattTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg < 1:3435363/150‑1 (MQ=255) ttattTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg < 2:1261583/150‑1 (MQ=255) tGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg > 2:2598358/1‑150 (MQ=255) tttttAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt < 1:3046504/150‑1 (MQ=255) tttAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt < 2:2586773/150‑1 (MQ=255) tttAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 2:2363398/1‑150 (MQ=255) ttAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATg > 2:4592451/1‑150 (MQ=255) aaTATCGAGATAACT‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg < 1:2314096/150‑1 (MQ=255) aaTATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg < 1:4059725/150‑1 (MQ=255) aaTATCGAGATAACG‑ATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg < 1:4896038/150‑1 (MQ=255) atatCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:4601683/1‑150 (MQ=255) atCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:2508438/1‑150 (MQ=255) tCGATATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt < 1:677954/150‑1 (MQ=255) tCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt > 2:719878/1‑150 (MQ=255) tCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt < 1:3284298/150‑1 (MQ=255) gagaTAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa < 1:1632683/150‑1 (MQ=255) agaTAACT‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGTAGTGCTATGTAGGCATGAt < 2:2290287/150‑1 (MQ=255) gaTAACT‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATa < 1:2904151/150‑1 (MQ=255) gaTAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATa < 1:2374911/150‑1 (MQ=255) | GAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATA > CP009273/2170600‑2170898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |