| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,352,965 | C→A | 16.7% | E223* (GAA→TAA) | rhmT ← | putative L‑rhamnonate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,352,965 | 0 | C | A | 16.7% | 614.2 / 86.7 | 208 | E223* (GAA→TAA) | rhmT | putative L‑rhamnonate transporter |
| Reads supporting (aligned to +/- strand): ref base C (87/86); new base A (16/19); total (103/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 214 total aligned reads displayed.
TTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCG > CP009273/2352817‑2353113 | tttGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttct > 1:4219213/1‑150 (MQ=255) ttGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttctt < 2:930527/150‑1 (MQ=255) ttGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttctt > 1:1639021/1‑150 (MQ=255) gTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCAGTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCa > 1:2399356/1‑150 (MQ=255) ttCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCAc > 1:4043681/1‑150 (MQ=255) ttCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCAc > 1:4505047/1‑150 (MQ=255) ttCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCAc > 2:1671454/1‑150 (MQ=255) cccAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACtt < 1:3242458/150‑1 (MQ=255) ccAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTg < 2:4076425/150‑1 (MQ=255) ccAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTg > 1:4417894/1‑150 (MQ=255) cAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGc < 1:3884563/150‑1 (MQ=255) cAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGc < 1:3380201/150‑1 (MQ=255) cAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGc < 1:3379994/150‑1 (MQ=255) cAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAg > 2:168545/1‑150 (MQ=255) aaTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGt > 1:1022734/1‑150 (MQ=255) aTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGtt < 1:3509637/150‑1 (MQ=255) tGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttg > 2:3177862/1‑150 (MQ=255) tGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttg < 1:1477935/150‑1 (MQ=255) tGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGttg < 2:707248/150‑1 (MQ=255) ccGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGttgat > 1:2543003/1‑150 (MQ=255) gCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttgattg < 1:1100032/150‑1 (MQ=255) cTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAg < 1:5105955/150‑1 (MQ=255) tGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGc > 1:2194469/1‑150 (MQ=255) tGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGc < 2:2140473/150‑1 (MQ=255) tGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGc < 2:601250/150‑1 (MQ=255) gggTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCa < 1:3204905/150‑1 (MQ=255) tCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACg < 2:2434210/150‑1 (MQ=255) tCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACg < 2:3773707/150‑1 (MQ=255) tCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACg > 2:907173/1‑150 (MQ=255) ggCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGtt > 1:1195263/1‑150 (MQ=255) ggCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGtt > 1:3792159/1‑150 (MQ=255) ggCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGtt < 1:397778/150‑1 (MQ=255) aGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGttttt < 1:1309842/150‑1 (MQ=255) aaaTTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGtt > 1:739379/1‑150 (MQ=255) aaTTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGttt < 2:4672891/150‑1 (MQ=255) gTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaa > 2:2280867/1‑150 (MQ=255) gTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaa < 1:3043817/150‑1 (MQ=255) gTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTCTTTACTCAGaaa > 1:4550553/1‑150 (MQ=255) aaaCCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAAc > 1:458554/1‑150 (MQ=255) aaaCCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTAATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAAc > 2:3596608/1‑150 (MQ=255) aCCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGt < 1:970588/150‑1 (MQ=255) gCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGcc > 1:2928080/1‑150 (MQ=255) gCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGcc < 2:2543003/150‑1 (MQ=255) ccACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCt < 2:3442709/150‑1 (MQ=255) ccACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCt > 2:4423650/1‑150 (MQ=255) ccACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCt < 1:595414/150‑1 (MQ=255) tGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGGTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTcc > 2:17215/1‑150 (MQ=255) gAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg > 1:2633372/1‑150 (MQ=255) aaTGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCgg < 1:2507422/150‑1 (MQ=255) ggTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgt > 1:4001631/1‑150 (MQ=255) gTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgtg > 2:1338434/1‑150 (MQ=255) tCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgtgt > 2:546085/1‑150 (MQ=255) cAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtc > 1:3443654/1‑150 (MQ=255) cAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATGACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtc < 1:3863615/150‑1 (MQ=255) ggTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcat > 2:1623523/1‑150 (MQ=255) ggaGATAATCGCTAGTTGCCAGACTCGGCCAGTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcatc < 1:5090766/148‑1 (MQ=255) tAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcatca > 2:2285315/1‑150 (MQ=255) tAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcatca > 2:1934076/1‑150 (MQ=255) tAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGGGTCATCAAGcc > 2:273920/1‑150 (MQ=255) aaTCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCa < 2:5078485/150‑1 (MQ=255) aTCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCaa < 2:4238448/150‑1 (MQ=255) aTCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCaa > 2:4356455/1‑150 (MQ=255) cGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCaaaa < 2:1040241/150‑1 (MQ=255) gCTAGTTGCCAGACTCGGTCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAg < 2:37879/150‑1 (MQ=255) gCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAg > 2:4424780/1‑150 (MQ=255) tAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGaa > 2:4115049/1‑150 (MQ=255) gTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAAtg < 1:4572309/150‑1 (MQ=255) gTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAAtg < 1:2092956/150‑1 (MQ=255) gTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAAtg > 2:5054394/1‑150 (MQ=255) ttGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAAtgt > 2:3323832/1‑150 (MQ=255) ccAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa > 1:882043/1‑150 (MQ=255) ccAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa < 1:4121592/150‑1 (MQ=255) cAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAAt < 2:657092/150‑1 (MQ=255) cTCGGCCATTACGCAGCGCATCGCTCAGCCGAGATGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATAccc < 1:3328159/150‑1 (MQ=255) tCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATAcccc > 2:222471/1‑150 (MQ=255) gCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACGTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGc < 1:4710499/150‑1 (MQ=255) aTTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCAcc > 2:1190193/1‑150 (MQ=255) aTTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCAcc < 2:1993532/150‑1 (MQ=255) tACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGa > 1:3158734/1‑150 (MQ=255) gCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTg > 2:899036/1‑150 (MQ=255) gcATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCcaac < 1:3722034/150‑1 (MQ=255) cATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCcaaca > 2:496651/1‑150 (MQ=255) cGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATc > 2:553356/1‑150 (MQ=255) gCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCCGCACCGACTGCCAACAATcc > 1:1748210/1‑150 (MQ=255) gCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATcc > 2:2892034/1‑150 (MQ=255) aGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCa < 2:3973118/150‑1 (MQ=255) aGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCa > 2:749721/1‑150 (MQ=255) ccGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAAt < 1:4993905/150‑1 (MQ=255) gagaAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATca > 1:2734030/1‑150 (MQ=255) gagaAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAACACCGACTGCCAACAATCCTTCAATca > 2:4855875/1‑150 (MQ=255) gagaAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATca < 2:1875856/150‑1 (MQ=255) gagaAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATca < 2:4464618/150‑1 (MQ=255) gaGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACaa > 1:4477071/2‑150 (MQ=255) cACTTTCTGTTGTTCTTCTCTTGCCAGTTGATTGTTAAGGAACGTTTTTTCTTGTTTACTAAGATTACGTGCCTGCTCCGGTGTGTCATCATGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACAt < 1:4950747/150‑1 (MQ=255) aCTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATc < 2:1946609/150‑1 (MQ=255) cTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATcc < 2:2071362/150‑1 (MQ=255) ttCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAg < 1:2285315/150‑1 (MQ=255) tgttgtTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAAc > 1:337604/1‑150 (MQ=255) gttATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGc < 2:146054/150‑1 (MQ=255) ttcttcACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGcc > 1:2896319/1‑150 (MQ=255) | TTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCG > CP009273/2352817‑2353113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |