| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,587,434 | T→A | 5.5% | L595F (TTA→TTT) | tmcA ← | elongator methionine tRNA (ac4C34) acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,587,434 | 0 | T | A | 5.5% | 795.8 / 5.8 | 254 | L595F (TTA→TTT) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (95/136); new base A (19/2); total (115/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 255 total aligned reads displayed.
CTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACGGT > CP009273/2587287‑2587582 | tctTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAac < 1:2515313/150‑1 (MQ=255) tctTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAac < 2:450064/150‑1 (MQ=255) ctTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacg > 2:4174525/1‑150 (MQ=255) ttCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTTAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacga > 1:1213062/1‑150 (MQ=255) cccGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacgacg < 1:2295263/150‑1 (MQ=255) cccGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacgacg < 2:477398/150‑1 (MQ=255) cGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGtt < 1:4633352/150‑1 (MQ=255) tGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAAt < 2:3247775/150‑1 (MQ=255) gACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTATGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGGTAATa > 1:2454865/1‑150 (MQ=255) cGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGc < 1:1133159/150‑1 (MQ=255) cGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGc > 2:2338492/1‑150 (MQ=255) cGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGGAATGCCAGTTAACTGGTTTGTAACAGACGCAAAAAGCAACCTAACGACGTTAATAGc > 1:3277112/1‑150 (MQ=255) ggACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCg < 2:5133954/150‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTATGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGAc < 1:2206531/150‑1 (MQ=255) cAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACg < 2:3811139/150‑1 (MQ=255) cAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACg < 2:4956024/150‑1 (MQ=255) tAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATg < 2:1193144/150‑1 (MQ=255) tAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATg < 2:1858395/150‑1 (MQ=255) aaCATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGa < 1:4286510/150‑1 (MQ=255) aaCATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGa < 1:4829343/150‑1 (MQ=255) aaCATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGa < 1:3588793/150‑1 (MQ=255) aCATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAg < 1:525930/150‑1 (MQ=255) cATCTTGCGGCCTGAAAGTTTATGTGTGGTACATAACTGCGCATCACTGGCTTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGc < 1:1789712/150‑1 (MQ=255) aTCGTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCg < 1:4231397/150‑1 (MQ=255) ttGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaaa < 2:729378/150‑1 (MQ=255) ttGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaaa < 2:4590760/150‑1 (MQ=255) tGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAg < 1:3926832/150‑1 (MQ=255) gCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGc < 1:3238740/150‑1 (MQ=255) cGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTGTTTAAACGCCCACGCAGCGCCGGGAATGCCAGTTAACAGGTTTTTAACAGACGCAAAAATCAACCTAAACACGTTAATATCGGACGATTATCGAAAGCa > 1:2318860/1‑150 (MQ=255) cGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCa > 2:2867374/1‑150 (MQ=255) cGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCa < 2:3961844/150‑1 (MQ=255) cttaaaGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAAc > 2:3908856/4‑150 (MQ=255) tGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAAcc < 1:1651100/150‑1 (MQ=255) aaGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGc > 2:3274644/1‑150 (MQ=255) gTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTTAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTTACAGACGCCATAAGCAAACTAACGACGGGAATAGCGGACGATGTGCGGAAGCAAAACCGGccc > 1:4776376/1‑149 (MQ=255) tttAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAg < 2:1744209/150‑1 (MQ=255) aaGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGGAATGCCAGTTAACTGGTTTGTAACAGACGCAATAAGCAACCAAACGACGTTAATATCGGACGATGAGCGAAAGCAAAACCGGCCCGTTc > 1:60852/1‑150 (MQ=255) tgtgGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAg < 2:62565/150‑1 (MQ=255) tgtgGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAAAGCCCACGCAGCGCCGGGAAAGCCCGTTCACTGGTTTTTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCCAAACCGGCCAGTTCAAg > 1:2440082/1‑150 (MQ=255) gtgtTACATACCTGCGCATCACGGGCTTTTTTCTGTAAACGCCCACGCAGCGCCGTTAATGCCAGTTCAGTGGTTTGTAACAGACGCAATAAGAAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGc < 1:96072/150‑1 (MQ=255) tgGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGcc < 1:3340286/150‑1 (MQ=255) gTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCACCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGcccg > 2:1299599/1‑148 (MQ=255) taaaTAACTGCGCATCACTGGCTTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGTTTTGTAACAGACGAAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgt < 1:502116/147‑1 (MQ=255) aCATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtc < 2:1664181/150‑1 (MQ=255) aCATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAAAAAGCCACCTAACGACGTTAATAGCGGACGATGTGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtc > 1:2735391/1‑150 (MQ=255) cATAAGTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcg < 1:4978215/150‑1 (MQ=255) cATAACTGCGCATCAGTGGCTTTTTTGTGTAACCGCCCACGCAGCGCCGGTATTGCCTGTTCAGTGTTTTGTAACAGACGAAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcg < 1:2636398/150‑1 (MQ=255) tAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAAAGCCCGTTCACTGGTTTGTAACAGACGCAATAAGCAACCAAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtc > 1:2129956/1‑150 (MQ=255) aaCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtcg > 2:838309/1‑150 (MQ=255) aaCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtcg < 1:3897494/150‑1 (MQ=255) cgcATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGa < 1:4600664/150‑1 (MQ=255) cgcATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCAAAGGTTTGTAACAGAAGCAATAAGCAACCAAACGACGTTAATATCGGACGATGAGCGAAAGCAAAACCGGCCAGTTAAAGCCACTCGTCGTCAGa > 1:3671751/1‑150 (MQ=255) aTCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAg < 1:5016595/150‑1 (MQ=255) cACTGGCGTTTTTCTGTAAACGCCCACCCAGCGCCGGTAATGCCACTTCACTGGTTTGATACAGACGAAATAAGCAACCAAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGa > 1:3752754/1‑150 (MQ=255) cACTGGCGTTTGTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGa < 2:4818706/150‑1 (MQ=255) aCTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCAAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGAc > 2:3330074/1‑150 (MQ=255) cTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACg > 2:4187839/1‑150 (MQ=255) tGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACgg > 2:2651597/1‑150 (MQ=255) ggCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGc < 2:4105074/150‑1 (MQ=255) gTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATc < 1:1021906/150‑1 (MQ=255) ttCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGTACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGttt < 2:1754467/150‑1 (MQ=255) ttCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGttt > 2:1106416/1‑150 (MQ=255) aaaCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGa > 1:2481152/1‑150 (MQ=255) aaaCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGa > 2:688238/1‑150 (MQ=255) aaaCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGa > 2:2773247/1‑150 (MQ=255) aaCGCCCCCGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGAt < 1:2255024/150‑1 (MQ=255) aaCGCCCACGCAGCGCCGGTAATGCCAGTTCACGGGTTTGTAACAGACGCAATACGCAACCTAACGACTTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGAt < 1:2254899/150‑1 (MQ=255) aCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATc < 2:463601/150‑1 (MQ=255) cACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAg < 2:259468/150‑1 (MQ=255) aCGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAgg > 2:3745899/1‑150 (MQ=255) cAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAg < 2:4382288/150‑1 (MQ=255) ccGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGttt < 1:3267443/150‑1 (MQ=255) aaTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCa > 1:2235046/1‑150 (MQ=255) aaTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCa > 1:3207757/1‑150 (MQ=255) aTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCAt > 1:4354390/1‑150 (MQ=255) aTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCAt > 2:1171455/1‑150 (MQ=255) aTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAAACTAACGACGTTATTAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCAt < 1:2743655/150‑1 (MQ=255) gCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTc < 2:3592116/150‑1 (MQ=255) gCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTc < 2:2454833/150‑1 (MQ=255) ccAGTTCCCTGGTTTGGAACAGACGCAATAAGCAACCTAACGACGTTAATACCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTAAGTGGATCAACAGGAAGCGTTTCGCCATTcc < 2:5006429/150‑1 (MQ=255) ccAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTcc < 2:5006412/150‑1 (MQ=255) aGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCAc > 2:4682443/1‑150 (MQ=255) gTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACt > 1:1479919/1‑150 (MQ=255) cACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgcg < 2:4344289/150‑1 (MQ=255) cTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGcgcg > 1:1218460/1‑150 (MQ=255) ttGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGc < 1:1723987/150‑1 (MQ=255) tAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTg < 1:5028910/150‑1 (MQ=255) aaCAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgc > 2:3514621/1‑150 (MQ=255) aaCAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgc < 2:1936454/150‑1 (MQ=255) aaCAGACGCAATAAGCAACCAAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgc < 2:4524651/150‑1 (MQ=255) aCAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgcg > 1:552436/1‑150 (MQ=255) cAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTgcgc < 1:196252/150‑1 (MQ=255) gCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATcgc < 2:4901595/150‑1 (MQ=255) gCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATcgc > 1:3999208/1‑150 (MQ=255) cAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATcgcg > 2:1522529/1‑150 (MQ=255) aTAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGAc > 1:4137611/1‑150 (MQ=255) aTAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGAc < 2:273244/150‑1 (MQ=255) aGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTa < 1:3767855/150‑1 (MQ=255) cAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTaaa > 2:2331287/1‑150 (MQ=255) aaCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc > 1:1874712/1‑150 (MQ=255) | CTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACGGT > CP009273/2587287‑2587582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |