| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,681,873 | T→A | 93.1% | Q97L (CAG→CTG) | glrR ← | response regulator regulating glmY sRNA in two‑component system with sensor protein GlrK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,681,873 | 0 | T | A | 93.1% | 842.7 / 37.9 | 245 | Q97L (CAG→CTG) | glrR | response regulator regulating glmY sRNA in two‑component system with sensor protein GlrK |
| Reads supporting (aligned to +/- strand): ref base T (7/10); new base A (82/146); total (89/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
AAACGCAGCATCAGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTT > CP009273/2681726‑2682019 | aaaCGCAGCATCAGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCagt < 2:5123202/150‑1 (MQ=255) aCGCAGCATCAGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAgtgt < 1:3382607/150‑1 (MQ=255) aTCCGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGGGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTgcagca < 1:1392489/150‑1 (MQ=255) aTCAGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGACACTAAAAACGCCCTGCTGTGTTgcagca > 2:476931/1‑150 (MQ=255) cAGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGGGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAAc < 2:2532697/150‑1 (MQ=255) cAGCGGGCTGCGGGTGACAAGTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAAc < 2:4478560/150‑1 (MQ=255) aGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAAca < 2:3308371/150‑2 (MQ=255) aGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACg < 2:942556/150‑1 (MQ=255) aGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACg > 2:4868512/1‑150 (MQ=255) aGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACg > 2:2503958/1‑150 (MQ=255) cGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGc > 2:3967954/1‑150 (MQ=255) cGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGc < 2:2443980/150‑1 (MQ=255) gggCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCa < 2:4139098/150‑1 (MQ=255) ggCTGCGGGTGACAAGTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGAGTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCAt < 2:3515464/150‑1 (MQ=255) gCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATc < 2:3561135/150‑1 (MQ=255) cGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCGTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGa > 2:4430396/1‑150 (MQ=255) gTGACAATTGCCACGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGATCCAGCGCATCGTCAATTGCCTGATATAGCGGGTCTTTGTCGACAGGCTTGGTGAGGAAACTNAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATa < 1:4792830/150‑1 (MQ=255) cAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAAc > 2:3843547/1‑150 (MQ=255) cAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAAc < 1:985174/150‑1 (MQ=255) aaTTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAAcc > 1:1528874/1‑150 (MQ=255) ttGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCAt > 2:1653490/1‑150 (MQ=255) ttGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCGCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCAt < 2:1591777/150‑1 (MQ=255) gCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATgc < 1:2795607/150‑1 (MQ=255) gcCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTaa > 1:2606148/1‑150 (MQ=255) gcCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTaa > 2:3042145/1‑150 (MQ=255) gcCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTaa < 2:1414816/150‑1 (MQ=255) gcCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTaa > 2:4565111/1‑150 (MQ=255) gcCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTaa < 2:56439/150‑1 (MQ=255) gTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGaataa > 2:3605097/1‑150 (MQ=255) tCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAAtt < 2:490495/150‑1 (MQ=255) aTCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTAc > 1:2109840/1‑150 (MQ=255) aTCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTAc < 1:4226536/150‑1 (MQ=255) gTGGCTGGCGCGGATTGCTCCAGCGCAGCGTCAATTCCCTGATATAGCGCGTCTTAGTCGACAGGCGTGGTGAGGACACTAAAAACGCCCTGCAGTCTTGCAGCAACGGCATCGGGAATAGAACCATGAGAGGTAAGAAAAATTACCGGc > 1:2379086/1‑150 (MQ=255) tggctggcGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCa < 1:331128/150‑1 (MQ=255) ggctggcGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCAt > 1:2509703/1‑150 (MQ=255) ggctggcGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCAt < 1:305108/150‑1 (MQ=255) ggctggcGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCAt > 1:5088454/1‑150 (MQ=255) gctggcGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCAtt < 2:789998/150‑1 (MQ=255) gctggcGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCAtt > 1:5008126/1‑150 (MQ=255) gcgcGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAACCGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCg < 2:2982774/150‑1 (MQ=255) gcgcGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCg < 2:2029541/150‑1 (MQ=255) gcgcGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCg < 2:421657/150‑1 (MQ=255) ggATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGACTAATTACCGGCATTCCCGGCTg > 1:3760056/1‑150 (MQ=255) tGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACt > 1:3880411/1‑150 (MQ=255) tGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACt > 2:839527/1‑150 (MQ=255) gCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACtt > 2:4485638/1‑150 (MQ=255) tCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTc > 1:2441891/1‑150 (MQ=255) ccAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCt < 1:1104348/150‑1 (MQ=255) cgcATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGAt < 1:3564796/150‑1 (MQ=255) cATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTCAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGAttt > 2:1537457/1‑150 (MQ=255) aTCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTc > 1:3192356/1‑150 (MQ=255) aTCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGACTAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTc > 1:638230/1‑150 (MQ=255) tCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCa < 1:1985268/150‑1 (MQ=255) tCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCa < 1:1985832/150‑1 (MQ=255) cGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAg < 1:2341055/150‑1 (MQ=255) gTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGc < 2:5166485/150‑1 (MQ=255) gTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGc < 1:311570/150‑1 (MQ=255) gTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGc > 1:1183151/1‑150 (MQ=255) gTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGc < 1:4697151/150‑1 (MQ=255) aaTTGCCTGATATAGCACGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCaaa > 1:4558320/1‑150 (MQ=255) cttGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCaatc < 2:3110280/149‑3 (MQ=255) aTTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAAc < 1:342526/150‑1 (MQ=255) aTTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAAc < 1:103618/150‑1 (MQ=255) tGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAg < 2:1783523/150‑1 (MQ=255) tGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAg < 1:1554498/150‑1 (MQ=255) gCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGc > 1:2145036/1‑150 (MQ=255) ccTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCt < 1:4333998/150‑1 (MQ=255) gATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCa < 1:68675/150‑1 (MQ=255) tataGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATa > 2:1936904/1‑150 (MQ=255) aGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCg > 1:831060/1‑150 (MQ=255) gcgTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGATAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTcc > 2:1301866/1‑150 (MQ=255) gTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCAt > 1:2970574/1‑150 (MQ=255) gTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATAACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCAt < 2:3431885/150‑1 (MQ=255) gTCTTTGACGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCAt > 1:1256721/1‑150 (MQ=255) tCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCAtt < 1:4056817/150‑1 (MQ=255) cTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCAttt < 1:3680921/150‑1 (MQ=255) tttGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTc < 1:3843547/150‑1 (MQ=255) ttGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTca < 2:4006280/150‑1 (MQ=255) tGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAACCAGCTGCATACCGTCCATTTcat > 1:1146789/1‑150 (MQ=255) aCAGGCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTcatccatc < 1:488592/150‑1 (MQ=255) ctgggttGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCTGGAATAGAACCATGCGCGGTAAGAATAATTCCCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCatccatcc < 1:1360419/145‑1 (MQ=255) ggCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGc < 1:447758/150‑1 (MQ=255) gCTTGGTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCa < 2:3791454/150‑1 (MQ=255) ggTGAGGAAACTAACAACGCCCTGCAGTGGTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTc < 2:2164641/150‑1 (MQ=255) ggTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGTTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTc < 2:2344641/150‑1 (MQ=255) ggTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTc < 1:919232/150‑1 (MQ=255) ggTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTc < 2:3777215/150‑1 (MQ=255) ggTGAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTc < 2:3777047/150‑1 (MQ=255) gAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCt < 1:4845780/150‑1 (MQ=255) gAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCt > 1:1697531/1‑150 (MQ=255) gAGGAAACTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCt < 1:1051680/150‑1 (MQ=255) ggAAACTAAAAACGCCCTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCtga < 1:4114241/150‑1 (MQ=255) naaCTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCtgatg > 1:615542/2‑150 (MQ=255) aaCTAAAAACGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCtgatga < 2:1141907/150‑1 (MQ=255) aaaaCGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATGTCATCCATCCGCAGGTCGCTGATGACTaaa > 2:4804388/1‑150 (MQ=255) aaaCGCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATGACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAAt < 2:2775322/150‑1 (MQ=255) gCCCTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTAc > 1:1670665/1‑150 (MQ=255) cccTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACt < 2:603053/150‑1 (MQ=255) cccTGCAGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACt > 2:3185274/1‑150 (MQ=255) tgcagTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACtttt < 2:3327752/150‑1 (MQ=255) | AAACGCAGCATCAGCGGGCTGCGGGTGACAATTGCCTCGCGCCAGCGTTCATCGGTGGCTGGCGCGGATTGCTCCAGCGCATCGTCAATTGCCTGATATAGCGCGTCTTTGTCGACAGGCTTGGTGAGGAAACTAAAAACGCCCTGCTGTGTTGCAGCAACGGCATCGGGAATAGAACCATGCGCGGTAAGAATAATTACCGGCATTCCCGGCTGCACTTTCTGGATTTCAGCAAACAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTT > CP009273/2681726‑2682019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |