| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,689,722 | T→G | 20.1% | L188* (TTA→TGA) | mltF → | membrane‑bound lytic transglycosylase F, murein hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,689,722 | 0 | T | G | 20.1% | 485.1 / 142.0 | 224 | L188* (TTA→TGA) | mltF | membrane‑bound lytic transglycosylase F, murein hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (90/89); new base G (29/16); total (119/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.71e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
TCGCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGATGGC > CP009273/2689576‑2689870 | tCGCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAAt > 2:5172262/1‑150 (MQ=255)tCGCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAAt > 2:4472503/1‑150 (MQ=255) gCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATgg > 2:148790/1‑150 (MQ=255) gCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATgg > 1:1951843/1‑150 (MQ=255) aCGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTCGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGa > 2:3938172/1‑150 (MQ=255) cGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGAt < 2:4022352/150‑1 (MQ=255) cGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCa < 1:1203094/150‑1 (MQ=255) tGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGACGATGTCATCg > 2:3163290/1‑150 (MQ=255) gggCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGa < 1:2558934/150‑1 (MQ=255) ggCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGaa < 1:2678508/150‑1 (MQ=255) gCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAg > 1:4412626/1‑150 (MQ=255) cAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGACTGAATGGAAGATGTCATCGAAgg > 2:4873188/1‑150 (MQ=255) cAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAgg > 1:4996557/1‑150 (MQ=255) aaCCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGa > 2:3098203/1‑150 (MQ=255) ccTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGaaa > 2:3510953/1‑150 (MQ=255) ccTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGaaa < 1:23015/150‑1 (MQ=255) ccTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGaaa > 1:1715306/1‑150 (MQ=255) gACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACt < 2:4096032/150‑1 (MQ=255) aCGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTc > 1:3817254/1‑150 (MQ=255) ggAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTa > 2:2514627/1‑150 (MQ=255) gAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTac < 2:4606698/150‑1 (MQ=255) gAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTac < 2:3945329/150‑1 (MQ=255) aaCTCACCGTTTCACCGGGTAATGTGTTTTATAACGATATCAAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTTGAAGGTAGACGACAAAAAATGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCa < 1:60240/150‑1 (MQ=255) aaCTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCa < 1:32771/150‑1 (MQ=255) aCTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCAt > 1:3226152/1‑150 (MQ=255) aCTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCAt < 1:3502327/150‑1 (MQ=255) aCTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCAt > 1:3226030/1‑150 (MQ=255) aCTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCAt > 1:3066331/1‑150 (MQ=255) tCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTg < 1:3610000/150‑1 (MQ=255) cGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGa > 2:1839319/1‑150 (MQ=255) tGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTc < 1:4070487/150‑1 (MQ=255) tGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTc > 2:264135/1‑150 (MQ=255) gCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCt < 2:726557/150‑1 (MQ=255) cACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTg < 2:2160149/150‑1 (MQ=255) aCCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGt < 1:5012439/150‑1 (MQ=255) aCCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGt < 2:500911/150‑1 (MQ=255) ggTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGcc > 2:1586647/1‑150 (MQ=255) cATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATc > 1:4901240/1‑150 (MQ=255) cATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATc > 2:3231845/1‑150 (MQ=255) aTGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCa < 1:3997948/150‑1 (MQ=255) aTGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCa < 1:1668184/150‑1 (MQ=255) gtggtgGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGc > 1:1680007/1‑150 (MQ=255) tggtggTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGcc > 1:3846519/1‑150 (MQ=255) ggtggtTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCt < 1:2893154/150‑1 (MQ=255) gtTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGttt > 1:4562382/1‑150 (MQ=255) tAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCa > 2:1309106/1‑150 (MQ=255) aCGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAgc > 2:1086470/1‑150 (MQ=255) cGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAgcg > 1:1805414/1‑150 (MQ=255) cGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAgcg > 1:1105268/1‑150 (MQ=255) aTCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGcgcg < 1:3169190/150‑1 (MQ=255) aTCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGcgcg < 1:3370371/150‑1 (MQ=255) tcCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTc > 2:1068105/1‑150 (MQ=255) ccAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCa > 2:297996/1‑150 (MQ=255) gACCCTGAAAGAAACAAAAGTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCAccc < 2:4388535/150‑1 (MQ=255) ccTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGa > 2:3741508/1‑150 (MQ=255) cTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAg > 2:4755700/1‑150 (MQ=255) gaaagaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCt > 1:2845796/1‑150 (MQ=255) gaaagaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCt > 1:2200551/1‑150 (MQ=255) gaaagaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCt > 1:578939/1‑150 (MQ=255) aaagaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTc > 2:3807819/1‑150 (MQ=255) aaagaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTc > 2:536894/1‑150 (MQ=255) agaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGc > 2:699309/1‑150 (MQ=255) gaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGcc < 1:2434917/150‑1 (MQ=255) gaaaCAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGcc > 1:2822295/1‑150 (MQ=255) cAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAg < 1:1907200/150‑1 (MQ=255) cAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAg > 1:239761/1‑150 (MQ=255) aacaTTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAgc < 2:338875/147‑1 (MQ=255) aTTCACGGAATTAAGCTTGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGATAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCt < 1:375123/150‑1 (MQ=255) cccGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCNa < 1:251855/150‑1 (MQ=255) cccGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGa < 1:3917168/150‑1 (MQ=255) ccGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGat < 1:674774/150‑1 (MQ=255) cGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGata > 1:4667652/1‑150 (MQ=255) cGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGata > 1:1357440/1‑150 (MQ=255) ggAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGatat < 1:136854/150‑1 (MQ=255) ggAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGatat > 2:1626697/1‑150 (MQ=255) ttAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCAcc > 2:1065033/1‑150 (MQ=255) tAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCg < 2:1219403/150‑1 (MQ=255) tAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCg > 1:1828773/1‑150 (MQ=255) aGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGAt < 2:675386/150‑1 (MQ=255) aGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGAt < 1:1547404/150‑1 (MQ=255) ggAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGaac > 2:4247911/1‑150 (MQ=255) gTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCg > 2:5148702/1‑150 (MQ=255) gacgacAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCGCGATATCACCGATGAACAACCGGTg > 2:1655225/1‑150 (MQ=255) acAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACtt < 1:516982/150‑1 (MQ=255) cAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATCTCACCGATGAACAACCGGTGACTTg > 1:3106665/1‑150 (MQ=255) aaaaaGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGt > 1:5145972/1‑150 (MQ=255) aaaaGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGtt > 1:3777970/1‑150 (MQ=255) aaaaGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGtt < 2:2290836/150‑1 (MQ=255) aaaGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGttt < 2:42130/150‑1 (MQ=255) aaaGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGttt < 1:413881/150‑1 (MQ=255) aaGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTa < 2:3333919/150‑1 (MQ=255) aaGGCTCTGCGGAATGAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTa < 1:264135/150‑1 (MQ=255) ggCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGc < 1:1484806/150‑1 (MQ=255) ggCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGc < 2:54401/150‑1 (MQ=255) tGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGtt < 2:3931819/150‑1 (MQ=255) cgtaatgaatgGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGTACAACCGGTGACTTGGTTTAGCCCGTTAg < 1:4954700/147‑1 (MQ=255) cGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAg < 1:77933/150‑1 (MQ=255) gAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGAt > 1:2072399/1‑150 (MQ=255) aatgaatgGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGATg < 2:2943760/150‑1 (MQ=255) ttAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGATGGc > 2:5008653/1‑150 (MQ=255) | TCGCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGATGGC > CP009273/2689576‑2689870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |