| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,466,043 | C→A | 6.7% | A277A (GCG→GCT) | fusA ← | protein chain elongation factor EF‑G, GTP‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,466,043 | 0 | C | A | 6.7% | 780.4 / 29.9 | 223 | A277A (GCG→GCT) | fusA | protein chain elongation factor EF‑G, GTP‑binding |
| Reads supporting (aligned to +/- strand): ref base C (99/109); new base A (7/8); total (106/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 223 total aligned reads displayed.
GGTAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTT > CP009273/3465896‑3466191 | ggTAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGc > 1:4264075/1‑150 (MQ=255)ggTAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGc < 2:4365447/150‑1 (MQ=255) gTAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGcc < 1:187330/150‑1 (MQ=255) gTAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGcc > 2:40357/1‑150 (MQ=255) aGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTg > 2:4767161/1‑150 (MQ=255) ttGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGGTCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCt < 2:1183901/150‑1 (MQ=255) tGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCtt > 2:903493/1‑150 (MQ=255) aaCGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTg < 1:2805404/150‑1 (MQ=255) gCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTc < 1:1393697/150‑1 (MQ=255) aGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTg < 2:758382/150‑1 (MQ=255) cAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACg > 1:2610861/1‑150 (MQ=255) agagAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGc > 2:4125423/1‑150 (MQ=255) gaACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGa > 1:968863/1‑150 (MQ=255) aaCGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGaa > 1:1384355/1‑150 (MQ=255) aaCGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGaa > 1:3981054/1‑150 (MQ=255) cGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAAcc < 1:193864/150‑1 (MQ=255) tCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAg < 2:623178/150‑1 (MQ=255) tCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAg > 1:4465655/1‑150 (MQ=255) tCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAg > 1:743374/1‑150 (MQ=255) cGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAgg > 1:4828270/1‑150 (MQ=255) gTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGt > 2:1900901/1‑150 (MQ=255) tcatcaCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGtt < 1:3604210/150‑1 (MQ=255) tcaCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTAcc > 1:1091609/1‑150 (MQ=255) caCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCa > 2:204070/1‑150 (MQ=255) aCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAg < 2:3160985/150‑1 (MQ=255) aCTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAg < 2:1769705/150‑1 (MQ=255) tGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGgat > 1:1817235/1‑150 (MQ=255) gTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGgatgat < 1:2867545/150‑1 (MQ=255) gTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgt > 2:3999657/1‑150 (MQ=255) gTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgt > 2:1356928/1‑150 (MQ=255) tCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttg > 1:1036364/1‑150 (MQ=255) tCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttg < 2:439405/150‑1 (MQ=255) cAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCTGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgt < 2:162475/150‑1 (MQ=255) cAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgt > 2:1576530/1‑150 (MQ=255) aGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgtt < 2:815235/150‑1 (MQ=255) aGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCgttgtt > 1:4655104/1‑150 (MQ=255) gCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTc < 2:3571244/150‑1 (MQ=255) gCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTc < 2:751413/150‑1 (MQ=255) gCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTc < 2:223997/150‑1 (MQ=255) ccGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCa > 1:3111054/1‑150 (MQ=255) cGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTACTCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAg > 2:244017/1‑150 (MQ=255) ggAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGa < 2:3743901/150‑1 (MQ=255) ttACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGa > 2:4697369/1‑150 (MQ=255) ttACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGa > 2:2163780/1‑150 (MQ=255) aCCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACg < 2:4343817/150‑1 (MQ=255) ccGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGc < 2:5180120/150‑1 (MQ=255) cgtcgtCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCa < 1:4898304/150‑1 (MQ=255) tcgtcCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCaga < 1:2045469/150‑1 (MQ=255) cgtcCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCagag > 2:3388987/1‑150 (MQ=255) gtcCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGc > 2:3554446/1‑150 (MQ=255) ccAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCAc < 1:5146448/150‑1 (MQ=255) ccAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCAc > 2:2063346/1‑150 (MQ=255) cAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCAcc > 2:3649256/1‑150 (MQ=255) tACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGa > 1:1193044/1‑150 (MQ=255) tACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGa > 1:3789989/1‑150 (MQ=255) cGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGAttt < 1:892487/150‑1 (MQ=255) gATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGc > 1:878612/1‑150 (MQ=255) ggTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTtcagtc > 1:1145285/1‑150 (MQ=255) gTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttc < 2:1147286/150‑1 (MQ=255) gTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttc < 1:4972835/150‑1 (MQ=255) cAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttctt > 1:4724574/1‑150 (MQ=255) cAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATAGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttctt < 1:2268172/150‑1 (MQ=255) aaCCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttcttc < 2:5085330/150‑1 (MQ=255) aaCCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGttcttc < 2:3768997/150‑1 (MQ=255) aCCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTca > 1:2476281/1‑150 (MQ=255) cGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacc > 2:4608264/1‑150 (MQ=255) cGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacc > 2:4608527/1‑150 (MQ=255) cGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacc > 2:111856/1‑150 (MQ=255) cGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacc > 1:98031/1‑150 (MQ=255) ggggATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacca < 2:4606433/150‑1 (MQ=255) ggggATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacca < 2:2150326/150‑1 (MQ=255) ggggATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTcacca < 2:3930159/150‑1 (MQ=255) ggATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCaccacc < 1:1128243/150‑1 (MQ=255) gATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCAccc < 1:2389772/150‑1 (MQ=255) aTGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCa > 1:3049030/1‑150 (MQ=255) tGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAg > 1:2836316/1‑150 (MQ=255) gCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGt < 1:4805572/150‑1 (MQ=255) cAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTa < 1:797483/150‑1 (MQ=255) cAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTa < 2:102556/150‑1 (MQ=255) ggTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAtt < 2:5131503/150‑1 (MQ=255) tAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTAtttt < 1:2649181/150‑1 (MQ=255) cAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCa > 1:502745/1‑150 (MQ=255) ttACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCa < 2:333973/150‑1 (MQ=255) aCCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGc > 1:2533193/1‑150 (MQ=255) aCCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGc < 1:3471242/150‑1 (MQ=255) aCCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGc > 2:2866230/1‑150 (MQ=255) ccGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGct < 2:1389992/150‑1 (MQ=255) gCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGctct > 1:5074544/1‑150 (MQ=255) cATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCtt < 1:1422305/150‑1 (MQ=255) aTCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTc < 1:4502729/150‑1 (MQ=255) aTCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTc < 1:1691332/150‑1 (MQ=255) aTCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTc > 1:2102934/1‑150 (MQ=255) aTCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTc < 1:4502547/150‑1 (MQ=255) gCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAg > 2:32039/1‑150 (MQ=255) gCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAg < 1:947574/150‑1 (MQ=255) gCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCGTCAGAAg < 1:4375820/150‑1 (MQ=255) cATCGCCTGAACACCTTTGTTCTTGAACGCAGAAACACAGGTAACCAGGATGAATTCGAAGTTCAGAACGCGCTGACGCAGAGCACCTGTGATATCTGCTTCAGTCAGAACTTAACCACCCAGGTATTTTTCCATCATCTCTTCAGAAga > 2:3008625/1‑149 (MQ=255) aTCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCt > 2:1466631/1‑150 (MQ=255) aTCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCt > 1:1332660/1‑150 (MQ=255) tCGCCTGAACACCTTTTTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCtt < 2:4384585/150‑1 (MQ=255) | GGTAGCGATTTTGAACGCCAGTGCAGAGAACGGCTCGTCATCACTTGCGTGACGTTCAGCCGGAGTGTCTTTACCGTCGTCCAGGATACCGTTGATCGCAGGTACGTCAACCGGGGATGGCAGGTAATCAATTACCGCATCCAGCATCGCCTGAACACCTTTGTTCTTGAACGCAGAACCACAGGTTACCAGGATGATTTCGTTGTTCAGAACGCGCTGACGCAGAGCACCTTTGATTTCTGCTTCAGTCAGTTCTTCACCACCCAGGTATTTTTCCATCAGCTCTTCAGAAGCTT > CP009273/3465896‑3466191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |