| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,921,982 | T→A | 5.9% | T328S (ACT→TCT) | viaA ← | stimulator of RavA ATPase activity; von Willebrand factor domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,921,982 | 0 | T | A | 5.9% | 879.8 / 35.4 | 254 | T328S (ACT→TCT) | viaA | stimulator of RavA ATPase activity; von Willebrand factor domain protein |
| Reads supporting (aligned to +/- strand): ref base T (108/131); new base A (5/10); total (113/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-01 | |||||||||||
Only 100 of 260 total aligned reads displayed.
GCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACT > CP009273/3921833‑3922131 | gCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGt > 1:1095269/1‑150 (MQ=255)gCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGt > 2:2162845/1‑150 (MQ=255)gCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGt > 1:1094835/1‑150 (MQ=255) ccTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTa > 1:2848470/1‑150 (MQ=255) tgtgGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATcc < 2:1494780/150‑1 (MQ=255) gtgGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCca < 1:2851962/150‑1 (MQ=255) tgGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCcac < 2:4936602/150‑1 (MQ=255) cTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGa > 2:1040373/1‑150 (MQ=255) tGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGAc > 2:4487190/1‑150 (MQ=255) tGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGAc < 1:822798/150‑1 (MQ=255) gAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGANa < 1:2908521/150‑1 (MQ=255) gAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACa > 1:5074529/1‑150 (MQ=255) gAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACa > 1:4222663/1‑150 (MQ=255) gAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACa > 1:1282125/1‑150 (MQ=255) aaGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAAt < 1:790106/150‑1 (MQ=255) aGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATa < 1:1827610/150‑1 (MQ=255) aGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATa < 1:3738335/150‑1 (MQ=255) gCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATaa > 1:1660693/1‑150 (MQ=255) cTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATaaa < 2:2060060/150‑1 (MQ=255) tCATAACGGACGATCTCGGTTGAAAATAGCATAATATAGGAGCGGCGGTTTTCTGCGAGAGGAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAAc < 1:3051760/150‑1 (MQ=255) cATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACGCAGACAATAAACg > 2:4626702/1‑150 (MQ=255) tAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGc < 2:3027348/150‑1 (MQ=255) agggACGATCTCGGTGTAAAATAGAATAATATAGCAGCGCGGTTTTTCTGCGAGAGCAATGCGAATCAAGGCCTGGAATAACGCTTTCGCACACTGTTAATTAAAGCCGCCCTTTGTGCCGTAAGTATCCACACAGACAATAAACGGccc < 1:3904851/148‑1 (MQ=255) ctaTCTCGGTGTAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAATTATCCACACAGACAATAAACGGCCcgcgcg < 1:4129739/148‑1 (MQ=255) cGATCTGGGTGTAAAATAGCATAATATAGCAGCGCCGTTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGATGTATCCACAAAGACAATAAACGGCCcgcgcg < 1:4979432/150‑1 (MQ=255) cGATCTCGGTGTAAAATAGCTTAATATAGCTGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCcgcgcg < 1:5023951/150‑1 (MQ=255) ctcGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGAAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTg < 1:2655356/150‑1 (MQ=255) ggTGGAAAATAGCATAATATAGCAGCGCCGTTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTTAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTc < 2:634163/150‑1 (MQ=255) ggTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTc < 2:792556/150‑1 (MQ=255) ggTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTc > 1:4928234/1‑150 (MQ=255) tGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCAt > 1:1898076/1‑150 (MQ=255) aaaTAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTa > 1:3842046/1‑150 (MQ=255) aaaTAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTa > 1:55328/1‑150 (MQ=255) aaaTAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTa > 2:3609272/1‑150 (MQ=255) aaaTAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTa > 2:3609160/1‑150 (MQ=255) aaTAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTaa > 1:4229021/1‑150 (MQ=255) tAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATc < 2:3390490/150‑1 (MQ=255) gCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCATGGCCAGGCAGAACGCTTTCGAACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCtt < 2:545943/150‑1 (MQ=255) gCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCtt < 1:4767973/150‑1 (MQ=255) ataataTAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCAGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTa > 2:3326727/1‑150 (MQ=255) gcCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGAc < 2:2779271/150‑1 (MQ=255) ccGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACg < 1:3132892/150‑1 (MQ=255) ccGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACg < 1:1186660/150‑1 (MQ=255) ccGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACg < 2:3258431/150‑1 (MQ=255) cGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGt > 1:632941/1‑150 (MQ=255) cGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGt > 2:4843890/1‑150 (MQ=255) cGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGt > 2:2584050/1‑150 (MQ=255) ggTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGtt > 1:4169536/1‑150 (MQ=255) ggTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGtt > 2:3673115/1‑150 (MQ=255) gTTTTCTGCGAGAGCAATGCGCATCACGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAACGCCGCCCATTGAGCCGTATGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTc < 1:640044/150‑1 (MQ=255) tttCTGCGAGAGCAATGCGAATCAAGGCCCGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGCGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGa < 1:1547922/150‑1 (MQ=255) ttCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGAt > 2:4282793/1‑150 (MQ=255) ttCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGAt < 2:2367965/150‑1 (MQ=255) cGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACtt < 1:337968/150‑1 (MQ=255) gagaGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACttt > 2:3596041/1‑150 (MQ=255) tGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGcc > 2:4740565/1‑150 (MQ=255) tGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGcc > 2:2511898/1‑150 (MQ=255) cgcATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTCTGTACCACCGGACGGTCGATCACTTTTTCACGCCAc > 2:4231904/1‑150 (MQ=255) gcATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACg < 2:1898076/150‑1 (MQ=255) tCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACt < 2:2697121/150‑1 (MQ=255) aGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCAc > 2:2357028/1‑150 (MQ=255) cAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTg > 2:595981/1‑150 (MQ=255) cAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTg > 1:2669132/1‑150 (MQ=255) ggCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCa < 2:326813/150‑1 (MQ=255) cAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAgg < 1:2039852/150‑1 (MQ=255) gAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCg < 2:918505/150‑1 (MQ=255) aCGCTTTCGCACACTGTACATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGAt < 1:2172238/150‑1 (MQ=255) cGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGTAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATa < 1:2274638/150‑1 (MQ=255) gCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAg > 2:5149768/1‑150 (MQ=255) cTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAgg > 1:1236720/1‑150 (MQ=255) tttCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGt > 1:1636526/1‑150 (MQ=255) tttCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGt > 1:2973581/1‑150 (MQ=255) cGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAg < 2:3842046/150‑1 (MQ=255) acacTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCaa < 2:3223480/150‑1 (MQ=255) acTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACt > 2:1854622/1‑150 (MQ=255) cATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGttttt < 1:4828189/150‑1 (MQ=255) aTTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTc > 2:2142452/1‑150 (MQ=255) ttAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcc > 1:3645221/1‑150 (MQ=255) tAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcca > 2:1476563/1‑150 (MQ=255) aaGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTccacc < 2:1745997/150‑1 (MQ=255) ccgccCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGc > 2:4622739/1‑150 (MQ=255) cgccCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGcc > 2:2783455/1‑150 (MQ=255) gccCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCg < 2:437222/150‑1 (MQ=255) cccATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGa > 1:775928/1‑150 (MQ=255) cccATTGAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGa < 2:3464836/150‑1 (MQ=255) aTTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACgg < 1:3686681/150‑1 (MQ=255) aTTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTGTCCACCAGCCGACgg > 2:851687/1‑150 (MQ=255) tGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTa > 2:4050653/1‑150 (MQ=255) gAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTaa < 2:3949842/150‑1 (MQ=255) gAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTaa < 2:117677/150‑1 (MQ=255) aGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGGTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTaaa > 2:4969984/1‑150 (MQ=255) ccGGAAGTATCCACACAGACAATAACCGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAAc < 2:1601019/150‑1 (MQ=255) ccGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAAc < 1:127402/150‑1 (MQ=255) ggAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTc < 1:3895260/150‑1 (MQ=255) ggAAGAATCCACCCAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTc < 2:1282125/150‑1 (MQ=255) gAAGTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCa < 1:4458823/150‑1 (MQ=255) gAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCa < 1:4902811/150‑1 (MQ=255) aGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCCCCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATa < 2:2860106/150‑1 (MQ=255) gTATCCAGACTTACTATAAACGGCCGGCGGGGCTTTTCTTCGTAATCTTTATGTACCAGGGTTCGTTTTATCTCTTTTTCACGGGTCGACTCACCGTGCTGGCGTTTGGTGAGCAAGTGTTTTTCCTCCTGGGGAGGGTTAAACTCATag < 2:4484806/150‑2 (MQ=255) gTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATAc < 1:2398718/150‑1 (MQ=255) | GCCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATACT > CP009273/3921833‑3922131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |