| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,928,395 | G→T | 8.7% | D420Y (GAT→TAT) | rbsA → | fused D‑ribose transporter subunits of ABC superfamily: ATP‑binding components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,928,395 | 0 | G | T | 8.7% | 750.9 / 41.6 | 219 | D420Y (GAT→TAT) | rbsA | fused D‑ribose transporter subunits of ABC superfamily: ATP‑binding components |
| Reads supporting (aligned to +/- strand): ref base G (93/107); new base T (11/8); total (104/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
ATGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCATCATCGTCATGCAT > CP009273/3928246‑3928544 | aTGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTtg < 2:1744703/150‑1 (MQ=255) tGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTtga < 1:3262089/150‑1 (MQ=255) tGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTtga < 1:4273696/150‑1 (MQ=255) aaCAGCAGGCGGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCatgatg > 2:4100551/1‑150 (MQ=255) agGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTa > 2:4631115/1‑150 (MQ=255) gCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTTATGAACCTAcc < 2:3962016/150‑1 (MQ=255) cTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTAccc > 1:4868869/1‑150 (MQ=255) cTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATGGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTAccc < 2:4741797/150‑1 (MQ=255) gtgagtgaTTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGt < 2:3157795/150‑1 (MQ=255) tgagtgaTTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTg < 1:2274864/150‑1 (MQ=255) gtgaTTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCg > 2:1665853/1‑150 (MQ=255) gaTGTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTa < 2:4707819/150‑1 (MQ=255) aTTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAg > 1:530727/1‑150 (MQ=255) ttCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGAt > 2:3029421/1‑150 (MQ=255) aTTCTTCTGTTTAATGTGAAAACTCCGTCGATTGAACAGTCAATTGGTCTGCTTTCCGGTGGCAATCAGCTAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTc < 1:878716/150‑1 (MQ=255) aTTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTc < 1:1700831/150‑1 (MQ=255) tCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCgg < 2:2436644/150‑1 (MQ=255) cGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGgc > 1:3283326/1‑150 (MQ=255) gTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGgcg < 2:3558331/150‑1 (MQ=255) gTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGCTCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGaa < 2:1936029/150‑1 (MQ=255) gTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGaa < 2:3709438/150‑1 (MQ=255) ttAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGaaaa < 1:4863821/150‑1 (MQ=255) aaaaCTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATc > 2:2233194/1‑150 (MQ=255) aCTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCATAGTGTTGATCCTTGATGAACCTACCCTTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTAt < 2:4468281/150‑1 (MQ=255) aCTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTAt < 1:4352747/150‑1 (MQ=255) aCTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCGACACGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTAt < 2:1472/150‑1 (MQ=255) tCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCa > 2:2074588/1‑150 (MQ=255) cGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAAc > 1:1079310/1‑150 (MQ=255) cGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAAc < 2:3299820/150‑1 (MQ=255) gTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACt < 2:3039821/150‑1 (MQ=255) gTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACt < 2:4953146/150‑1 (MQ=255) cGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGa < 1:471981/150‑1 (MQ=255) gATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGAt > 2:3842167/1‑150 (MQ=255) aTGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGAtt < 2:1113854/150‑1 (MQ=255) tGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTa > 2:1238977/1‑150 (MQ=255) ggAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTaa > 1:4525673/1‑150 (MQ=255) gAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAAc > 1:1168839/1‑150 (MQ=255) aaCAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAAcc < 1:1312174/150‑1 (MQ=255) aCAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGACGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCa < 1:1771/150‑1 (MQ=255) cAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAg < 2:2321084/150‑1 (MQ=255) cAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAg < 2:1615052/150‑1 (MQ=255) aGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGt > 2:4176042/1‑150 (MQ=255) gCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTATCCAGTTc > 1:1448892/1‑150 (MQ=255) aaTTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCaa < 2:2741958/150‑1 (MQ=255) ttGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAg > 2:3463222/1‑150 (MQ=255) gTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCg < 1:2055887/150‑1 (MQ=255) gTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCg > 1:3399126/1‑150 (MQ=255) tCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGa > 2:3403706/1‑150 (MQ=255) tCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGa < 2:3048737/150‑1 (MQ=255) cTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGAt > 2:1166842/1‑150 (MQ=255) cTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGAt > 2:2580445/1‑150 (MQ=255) cTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGAt > 1:3852670/1‑150 (MQ=255) tGCTTTCCGGTGGCAATCAGCAAACAGTGGCGATTGCCCGCGGTCTGAGGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGTTg < 2:2317991/150‑1 (MQ=255) cTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGc > 1:460533/1‑150 (MQ=255) ttCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCtt < 1:4962046/150‑1 (MQ=255) tCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTg > 1:4581494/1‑150 (MQ=255) ccGGTGGCAATCAGCAAAAAGTGGCGAGTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGa < 2:3201335/150‑1 (MQ=255) cGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAg > 2:2146882/1‑150 (MQ=255) gTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATc < 1:4036557/110‑1 (MQ=255) gTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATc > 2:4036557/1‑110 (MQ=255) gTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGca > 1:1430646/1‑150 (MQ=255) tGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGcat < 2:4605387/150‑1 (MQ=255) cAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGcatcat < 1:3579858/150‑1 (MQ=255) aaTCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCAtt < 1:5015540/150‑1 (MQ=255) aTCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTc > 1:3511627/1‑150 (MQ=255) tCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCt > 1:1710897/1‑150 (MQ=255) tCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCt > 2:2607350/1‑150 (MQ=255) aGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGGTGATCCTTGATGAACCGACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTgg < 1:3048188/150‑1 (MQ=255) cAAAAAGTGGCTATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGgtg > 1:632935/1‑150 (MQ=255) aaaaGTGGCGATTGCCCGCGGTCTGATGACACGCCCCACAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTc < 1:3929574/150‑1 (MQ=255) aaaaGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTc < 1:859027/150‑1 (MQ=255) aaGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCAt < 1:12042/150‑1 (MQ=255) aaGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCAt < 1:2128147/150‑1 (MQ=255) aaGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCAt < 2:2100701/150‑1 (MQ=255) aGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATc < 2:2820160/150‑1 (MQ=255) gCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGgag < 1:2578889/150‑1 (MQ=255) gATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGAt > 1:1745555/1‑150 (MQ=255) aTTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATg > 1:1619990/1‑150 (MQ=255) ttGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGc > 2:626069/1‑150 (MQ=255) ttGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGc < 1:3218884/150‑1 (MQ=255) cgcgGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGaa < 2:1386743/150‑1 (MQ=255) cgGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGt < 1:1636284/150‑1 (MQ=255) cTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTa < 1:1780317/150‑1 (MQ=255) tgaCACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCa > 2:2171797/1‑150 (MQ=255) tgaCACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCa > 2:2381156/1‑150 (MQ=255) acacGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATg < 1:956772/150‑1 (MQ=255) cacGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGa < 2:2869586/150‑1 (MQ=255) acGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAg > 1:1790978/1‑150 (MQ=255) gCCCCAAAGTGTTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCg > 2:5162552/1‑150 (MQ=255) ccAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATc < 1:3149007/150‑1 (MQ=255) ccAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATc < 1:3170009/150‑1 (MQ=255) ccAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATc < 1:3339115/150‑1 (MQ=255) ccAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATc < 1:4591611/150‑1 (MQ=255) ccAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTACAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATc < 1:4172587/150‑1 (MQ=255) tgtTGATCCTTTATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGcatca > 2:1345243/1‑150 (MQ=255) tgtTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGcatca < 1:5093882/150‑1 (MQ=255) ttGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCatcatc > 1:4680498/1‑150 (MQ=255) tGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATAGCATCATCg < 2:4820279/150‑1 (MQ=255) tgatgaACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCATCATCGTcatgca > 2:734533/1‑150 (MQ=255) gatgaACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCATCATCGTcatgcat > 2:1882383/1‑150 (MQ=255) | ATGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCATCATCGTCATGCAT > CP009273/3928246‑3928544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |