| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,353,585 | C→T | 6.2% | L425L (TTG→TTA) | dsbD ← | fused thiol:disulfide interchange protein: activator of DsbC/conserved protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,353,585 | 0 | C | T | 6.2% | 790.6 / 27.2 | 243 | L425L (TTG→TTA) | dsbD | fused thiol:disulfide interchange protein: activator of DsbC/conserved protein |
| Reads supporting (aligned to +/- strand): ref base C (123/104); new base T (9/6); total (132/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 246 total aligned reads displayed.
AGATCTAACATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTCCAGCAG > CP009273/4353436‑4353734 | aGATCTAACATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAAcc < 1:3238457/150‑1 (MQ=255)aGATCTAACATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAAcc > 2:490559/1‑150 (MQ=255) tAACATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGc > 2:3457800/1‑150 (MQ=255) tAACATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGc > 2:5059834/1‑150 (MQ=255) aaCATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGcc > 2:473571/1‑150 (MQ=255) aCATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCg < 2:1124135/150‑1 (MQ=255) cATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGc < 1:780200/150‑1 (MQ=255) aTCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCt > 1:954802/1‑150 (MQ=255) aTCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCt < 1:2747534/150‑1 (MQ=255) tCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACTAATGCCGCTg > 1:2902800/1‑150 (MQ=255) ccGGTTTGCCTTTGGCTTCATCGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCca < 1:3419207/150‑1 (MQ=255) gTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCcagca > 2:2616211/1‑150 (MQ=255) gTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCcagca > 2:2616091/1‑150 (MQ=255) gTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCcagca < 2:3763009/150‑1 (MQ=255) tGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAAttt > 1:508743/1‑150 (MQ=255) cAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACaa < 1:3570466/150‑1 (MQ=255) aaCGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAAt > 1:1897043/1‑150 (MQ=255) aagAGCGCCTGATTTAACTCATCTACCGTTTTGATGTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGACGCTGCCAGCAGAATAATTAGCACAATa > 2:754126/3‑150 (MQ=255) aCGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATa > 1:732942/1‑150 (MQ=255) aCGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATa > 1:1679359/1‑150 (MQ=255) aCGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATa > 2:753374/1‑150 (MQ=255) cGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACTAATGCCGCTGCCAGCAGAATAATTTGCACAATAc < 2:2207235/150‑1 (MQ=255) aGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGc > 2:1056341/1‑150 (MQ=255) cTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCa < 1:870145/150‑1 (MQ=255) gATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGc < 2:3439986/150‑1 (MQ=255) aTTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGcc > 2:4816543/1‑150 (MQ=255) cTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGttt > 2:3161581/1‑150 (MQ=255) tCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTa < 2:4483570/150‑1 (MQ=255) cTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCt > 2:1888563/1‑150 (MQ=255) cTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCt < 2:3483887/150‑1 (MQ=255) aCCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACTAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGt > 1:1713682/1‑150 (MQ=255) gTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAgg < 1:4040823/150‑1 (MQ=255) gTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAgg < 1:4624524/150‑1 (MQ=255) gTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAgg > 2:3873873/1‑150 (MQ=255) tttGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCt > 2:3613959/1‑150 (MQ=255) ttGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTg < 1:1264504/150‑1 (MQ=255) tGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTgg < 1:2589042/150‑1 (MQ=255) gATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACTAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGt > 2:135644/1‑150 (MQ=255) gATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGt < 2:1754615/150‑1 (MQ=255) tttGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACACTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGa < 1:4680392/150‑1 (MQ=255) ttGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGAt < 1:5048217/150‑1 (MQ=255) tgtgTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATa < 1:1397099/150‑1 (MQ=255) tgtgTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATa > 2:4741228/1‑150 (MQ=255) tgtAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATaaa < 1:830712/150‑1 (MQ=255) gtAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAg > 2:2782512/1‑150 (MQ=255) gtAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAg > 2:2351032/1‑150 (MQ=255) gtAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAg < 2:2866966/150‑1 (MQ=255) gtAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAg > 1:3059759/1‑150 (MQ=255) gtAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAg < 2:3974277/150‑1 (MQ=255) aaaGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGc < 1:1314687/150‑1 (MQ=255) aaaGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGc < 2:4583679/150‑1 (MQ=255) aaGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGcc < 1:4352531/150‑1 (MQ=255) aGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGccc > 1:3997434/1‑150 (MQ=255) aGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGccc > 1:4499665/1‑150 (MQ=255) aGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGccc > 1:4226043/1‑150 (MQ=255) gTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCa > 2:2925963/1‑150 (MQ=255) agaTGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCa > 2:2309657/1‑150 (MQ=255) gaTGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCaa > 2:5012036/1‑150 (MQ=255) cGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGaa < 1:3957779/150‑1 (MQ=255) gTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAAt < 1:308845/150‑1 (MQ=255) gAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGa > 1:3011073/1‑150 (MQ=255) gAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGa < 1:4753488/150‑1 (MQ=255) ttGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACAcc < 2:1268659/150‑1 (MQ=255) tGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACAccc > 1:1171038/1‑150 (MQ=255) gcgcGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCa < 2:3725792/150‑1 (MQ=255) cgcgGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAg > 1:2273926/1‑150 (MQ=255) cgcgGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAg < 1:280012/150‑1 (MQ=255) gcgGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACTAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAgc < 2:1628977/150‑1 (MQ=255) gcgGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAgc > 2:3404488/1‑150 (MQ=255) cgGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAgcg < 1:150671/150‑1 (MQ=255) cgGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAgcg < 1:225725/150‑1 (MQ=255) aTGCGTCGCACCAAATGCCCAATCCTGAAGTGTGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGa > 1:3340773/1‑150 (MQ=255) aTGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGa > 2:4356889/1‑150 (MQ=255) aTGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGa > 1:1222485/1‑150 (MQ=255) gCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGAcc > 2:3073306/1‑150 (MQ=255) gTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACcac > 1:3678515/1‑150 (MQ=255) tCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACcaca > 2:4348103/1‑150 (MQ=255) tCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACcaca < 1:5060362/150‑1 (MQ=255) tCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACcaca > 2:1932355/1‑150 (MQ=255) gCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAg > 1:4880418/1‑150 (MQ=255) aCCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCg > 1:2500415/1‑150 (MQ=255) aaaTGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACACGCGtca > 2:3533741/1‑148 (MQ=255) aaaTGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACACGCGTaa > 2:553779/1‑150 (MQ=255) aaaTGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTaa < 1:2003671/150‑1 (MQ=255) cccAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATcccc > 1:2954414/1‑150 (MQ=255) cAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCAt < 2:2085153/150‑1 (MQ=255) aaTCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAgcg < 1:2889059/126‑1 (MQ=255) ccTGAAGTGGGCGCACGCTAACTAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACAt > 1:4953708/1‑150 (MQ=255) ccTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACAt > 2:2796385/1‑150 (MQ=255) gggCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATc < 1:3853749/150‑1 (MQ=255) gggCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATc < 2:4509176/150‑1 (MQ=255) gcgcACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCAc < 1:1128115/150‑1 (MQ=255) gcACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTc > 1:798043/1‑150 (MQ=255) cACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCg > 2:1482044/1‑150 (MQ=255) cTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTcc < 2:2904741/150‑1 (MQ=255) cTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTcc < 2:1698889/150‑1 (MQ=255) tAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTCca > 2:814607/1‑150 (MQ=255) tAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTCca > 1:2639704/1‑150 (MQ=255) aCCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGTCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTCcagc > 2:2411495/1‑150 (MQ=255) aCCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTCcagc > 1:4674827/1‑150 (MQ=255) | AGATCTAACATCACCGGTTTGCCTTTGGCTTCAACGAGCGCCTGATTTAACTCATCTACCGTTTTGATTTGTGTAAAGTTGAGATGCGTCTGAGTTTGCGCGGTATGCGTCGCACCAAATGCCCAATCCTGAAGTGGGCGCACGCTAACCAATGCCGCTGCCAGCAGAATAATTTGCACAATACGCATCCAGCCGCGTTTAGCCTGTAGGCTGGTGATAAAGGCCCAGCCAAAGAATGCGACACCCAGCGCCGACCACAAGCGTAATCCCCATACATCACCAATCACTCGCTCCAGCAG > CP009273/4353436‑4353734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |