| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,432,682 | G→T | 20.9% | E162* (GAA→TAA) | tamA → | translocation and assembly module for autotransporter export, outer membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,432,682 | 0 | G | T | 20.9% | 637.9 / 136.2 | 245 | E162* (GAA→TAA) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit |
| Reads supporting (aligned to +/- strand): ref base G (74/119); new base T (24/28); total (98/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 249 total aligned reads displayed.
ATTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCG > CP009273/4432534‑4432831 | ttGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTaa < 1:3828170/150‑1 (MQ=255) cgcgGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAAttt < 1:179164/150‑1 (MQ=255) cgcgGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAAttt < 1:1988388/150‑1 (MQ=255) cggcgCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCaa < 2:506432/150‑1 (MQ=255) ggcgCGCGGACCGATAAAGACTATTTGAACGTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCaaa < 2:4496486/150‑1 (MQ=255) gcgcgcGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAg < 2:1218231/150‑1 (MQ=255) cgcgcgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAgc < 1:669357/150‑1 (MQ=255) cgcgcgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAgc < 1:669150/150‑1 (MQ=255) gcgcgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAgcg < 1:1090763/150‑1 (MQ=255) gcgcgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAgcg < 1:3689597/150‑1 (MQ=255) cgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAg < 2:2027776/150‑1 (MQ=255) gACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCt > 1:276458/1‑150 (MQ=255) cGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTggg < 1:4509123/150‑1 (MQ=255) cGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTACAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAATCGCAGCTggg < 1:877074/150‑1 (MQ=255) tAAAGACTCTTTGAAAGTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCAt < 2:4013183/150‑1 (MQ=255) tAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCAt < 2:774445/150‑1 (MQ=255) aaaGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCAtt > 2:4945892/1‑150 (MQ=255) gACTATTTGAAATTGCTCGAGACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTgcg < 2:2425378/150‑1 (MQ=255) aCTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTgcgc > 2:3174013/1‑150 (MQ=255) aTTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCg < 1:2106195/150‑1 (MQ=255) ttGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGc < 1:870697/150‑1 (MQ=255) gAAATTGCTCGATACTCGCCCGGCTATTGGCACGGGACTGAACCACGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCt < 2:2967074/150‑1 (MQ=255) aaaTTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTg < 2:2453552/150‑1 (MQ=255) aaaTTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTg < 2:2453499/150‑1 (MQ=255) aTTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCa > 2:5093087/1‑150 (MQ=255) ttGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCAt < 1:144312/150‑1 (MQ=255) tGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATa > 2:1606873/1‑150 (MQ=255) gATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGcc > 2:4240811/1‑150 (MQ=255) cTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCAGTGCGCTCGGCCTGCATAAAGCCTTCt > 2:3547097/1‑150 (MQ=255) cTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCt < 1:680562/150‑1 (MQ=255) tCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTg > 2:4156987/1‑150 (MQ=255) cGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTgg > 1:3292451/1‑150 (MQ=255) cTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTg > 2:3628394/1‑150 (MQ=255) tATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGa > 1:3757925/1‑150 (MQ=255) ttGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGAtt < 2:1344140/150‑1 (MQ=255) aCGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAAc < 2:1866798/150‑1 (MQ=255) aCGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGAGTATAAc > 1:3094393/1‑150 (MQ=255) gTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGt < 1:932257/150‑1 (MQ=255) gTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGt < 2:1700722/150‑1 (MQ=255) tGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCg < 2:313177/150‑1 (MQ=255) tGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCg < 2:2550427/150‑1 (MQ=255) tGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCg > 2:2557215/1‑150 (MQ=255) tGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCg < 2:3234298/150‑1 (MQ=255) gAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGa < 1:5037793/150‑1 (MQ=255) gAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGa < 1:4205296/150‑1 (MQ=255) aCCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAAc > 1:1047775/1‑150 (MQ=255) ccAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACg < 2:69385/150‑1 (MQ=255) aGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGtt < 1:4285546/150‑1 (MQ=255) aGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGtt < 2:646661/150‑1 (MQ=255) aGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGtt > 2:1331721/1‑150 (MQ=255) gggCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTa < 2:1158298/150‑1 (MQ=255) gCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTAcc < 1:4005400/150‑1 (MQ=255) gCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTAcc < 1:1409423/150‑1 (MQ=255) gCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTAcc < 2:3938012/150‑1 (MQ=255) gCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTAcc < 2:3635265/150‑1 (MQ=255) cGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCg > 1:3829815/1‑150 (MQ=255) cGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCg < 1:2592166/150‑1 (MQ=255) gATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGc > 2:860226/1‑150 (MQ=255) tATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAATGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCttt < 1:4155156/150‑1 (MQ=255) tATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCttt > 1:2645281/1‑150 (MQ=255) tGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTgg < 1:3196555/150‑1 (MQ=255) gAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTggg < 2:4783947/150‑1 (MQ=255) aaaaTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGc < 2:910470/150‑1 (MQ=255) aaaTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCa < 1:230338/150‑1 (MQ=255) aaTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAt < 1:3225722/150‑1 (MQ=255) aTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCAGTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAtg < 2:3774022/150‑1 (MQ=255) tttCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAtgt < 2:4985319/150‑1 (MQ=255) aaGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCttt < 2:1522834/150‑1 (MQ=255) aaGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCttt < 2:4115778/150‑1 (MQ=255) aGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTg < 1:1879616/150‑1 (MQ=255) aaCCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc > 2:940936/1‑150 (MQ=255) ccAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcac < 2:1429008/150‑1 (MQ=255) ccAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcac > 1:4655804/1‑150 (MQ=255) cATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAt < 1:3446458/150‑1 (MQ=255) ttgcgttgcgTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATcc > 1:4061029/1‑150 (MQ=255) ttgcgttgcgTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATcc < 1:777228/150‑1 (MQ=255) ttgcgttgcgTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATcc > 2:4174817/1‑150 (MQ=255) cgttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgcg < 2:2609384/150‑1 (MQ=255) cgttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgcg > 1:1267156/1‑150 (MQ=255) gttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGa > 1:1310334/1‑150 (MQ=255) gttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGa > 2:4268953/1‑150 (MQ=255) ttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGAt < 1:1184312/150‑1 (MQ=255) ttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGGTACCGCTTTGGGCATGTGGCCTTTGAAGGATCACAAATCCGCGAt < 2:1705826/150‑1 (MQ=255) gtAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAAt < 1:5167174/150‑1 (MQ=255) gtAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGATACCGCTTTGGGCATGTGACCTATGAAGGATCACAAATCCGCTATGAAt > 1:910224/1‑150 (MQ=255) aaaGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAc > 2:4367561/1‑150 (MQ=255) aaaGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAc < 2:1180089/150‑1 (MQ=255) aaGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAcc > 1:2205819/1‑150 (MQ=255) aGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCAGCGATGAATTCCt < 2:4779358/150‑1 (MQ=255) aGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCt < 1:2672499/150‑1 (MQ=255) aGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCt < 1:1387302/150‑1 (MQ=255) ggTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTg < 2:4304619/150‑1 (MQ=255) ggTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTg > 2:3042617/1‑150 (MQ=255) ttATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCa < 1:5093087/150‑1 (MQ=255) ttCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAAt < 1:1600215/150‑1 (MQ=255) cGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCt > 1:4739565/1‑150 (MQ=255) cGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCt > 2:2230713/1‑150 (MQ=255) aGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTg > 1:2833202/1‑150 (MQ=255) gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGGTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc < 2:1586238/150‑1 (MQ=255) gAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCg < 1:2931573/150‑1 (MQ=255) | ATTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCG > CP009273/4432534‑4432831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |