Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,562,043 C→A 93.6% intergenic (+311/‑188) yjiS → / → yjiT DUF1127 family protein/pseudogene

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,562,0430CA93.6% 716.4 / 30.9 219intergenic (+311/‑188)yjiS/yjiTDUF1127 family protein/pseudogene
Reads supporting (aligned to +/- strand):  ref base C (7/7);  new base A (98/106);  total (105/114)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 219 total aligned reads displayed.

TACTTGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGT  >  CP009273/4561897‑4562189
                                                                                                                                                  |                                                                                                                                                  
 aCTTGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGt                                                                                                                                                >  2:4427365/1‑150 (MQ=255)
 aCTTGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGt                                                                                                                                                <  2:2397556/150‑1 (MQ=255)
  cTTGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTg                                                                                                                                               <  1:885075/150‑1 (MQ=255)
    tgtgTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGAt                                                                                                                                             >  2:2441817/1‑150 (MQ=255)
    tgtgTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGAt                                                                                                                                             <  1:277028/150‑1 (MQ=255)
     gtgtTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATa                                                                                                                                            <  1:1311463/150‑1 (MQ=255)
        ttttttGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAAt                                                                                                                                         <  1:809013/150‑1 (MQ=255)
        ttttttGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAAt                                                                                                                                         >  1:4549007/1‑150 (MQ=255)
             tgactgacTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGtt                                                                                                                                    >  1:2445310/1‑150 (MQ=255)
               actgactTTACAACTCTCATTATTCGCTAGTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTtgt                                                                                                                                  <  2:4874364/150‑1 (MQ=255)
                 tgactTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGa                                                                                                                                <  1:1046275/150‑1 (MQ=255)
                 tgactTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGa                                                                                                                                >  2:471172/1‑150 (MQ=255)
                  gactTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGAt                                                                                                                               <  2:2586129/150‑1 (MQ=255)
                  gactTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGATTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGAt                                                                                                                               <  1:443328/150‑1 (MQ=255)
                   actTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGAtt                                                                                                                              >  2:1484901/1‑150 (MQ=255)
                        aCAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAg                                                                                                                         <  2:944083/150‑1 (MQ=255)
                          aaCTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGAt                                                                                                                       >  2:2994274/1‑150 (MQ=255)
                          aaCTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGAt                                                                                                                       <  2:5047398/150‑1 (MQ=255)
                           aCTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATg                                                                                                                      <  1:1732703/150‑1 (MQ=255)
                            ctctCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGTAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATgg                                                                                                                     <  1:1418288/150‑1 (MQ=255)
                                cATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGa                                                                                                                 <  2:3850944/150‑1 (MQ=255)
                                 attattCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGat                                                                                                                <  2:181766/150‑1 (MQ=255)
                                 attattCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGat                                                                                                                <  1:1133322/150‑1 (MQ=255)
                                  ttattCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGata                                                                                                               >  1:3803371/1‑150 (MQ=255)
                                   tattCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTTTGATTAATAGATGGTTGatat                                                                                                              >  2:5000744/1‑150 (MQ=255)
                                    attCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATc                                                                                                             >  2:1167189/1‑150 (MQ=255)
                                    attCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATc                                                                                                             >  2:3380640/1‑150 (MQ=255)
                                     ttCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCa                                                                                                            >  2:748460/1‑150 (MQ=255)
                                      tCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCAt                                                                                                           <  1:5111216/150‑1 (MQ=255)
                                       cGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCAtt                                                                                                          <  1:407043/150‑1 (MQ=255)
                                        gCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCAttt                                                                                                         <  1:564599/150‑1 (MQ=255)
                                         cTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATTGTTGATATCAtttt                                                                                                        >  1:3928986/1‑150 (MQ=255)
                                          tATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCAttttt                                                                                                       >  2:214742/1‑150 (MQ=255)
                                            ttGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTAt                                                                                                     <  1:4964983/150‑1 (MQ=255)
                                             tgtgCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATc                                                                                                    >  1:5093365/1‑150 (MQ=255)
                                              gtgCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCt                                                                                                   >  1:782201/1‑150 (MQ=255)
                                              gtgCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCAATTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCt                                                                                                   >  1:22961/1‑150 (MQ=255)
                                               tgCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTa                                                                                                  >  1:3482099/1‑150 (MQ=255)
                                                   gTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAAt                                                                                              <  2:3669157/150‑1 (MQ=255)
                                                    tttCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAAtt                                                                                             <  2:282278/150‑1 (MQ=255)
                                                     ttCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTg                                                                                            >  2:4949086/1‑150 (MQ=255)
                                                     ttCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTg                                                                                            >  2:2332329/1‑150 (MQ=255)
                                                         ctAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATATATGGTTGATATCATTTTTATCTAAAATTGAttt                                                                                        >  1:3043608/1‑150 (MQ=255)
                                                         ctAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGAttt                                                                                        >  1:3000392/1‑150 (MQ=255)
                                                           aaTTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTtat                                                                                      <  1:3393211/150‑1 (MQ=255)
                                                           aaTTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTtat                                                                                      <  1:2653271/150‑1 (MQ=255)
                                                              tGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGt                                                                                   >  2:3011858/1‑150 (MQ=255)
                                                              tGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGt                                                                                   >  1:157564/1‑150 (MQ=255)
                                                               gTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTa                                                                                  >  1:1352264/1‑150 (MQ=255)
                                                                  ttATTCCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATTAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCg                                                                               <  1:3194186/150‑1 (MQ=255)
                                                                  ttATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCg                                                                               <  2:1215055/150‑1 (MQ=255)
                                                                    ataCCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGAc                                                                             <  2:2764918/150‑1 (MQ=255)
                                                                       cccTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTg                                                                          >  1:2340791/1‑150 (MQ=255)
                                                                         cTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGaa                                                                        >  2:3993891/1‑150 (MQ=255)
                                                                          tGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGaaa                                                                       >  2:3173560/1‑150 (MQ=255)
                                                                              aaGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAAt                                                                   <  2:4893357/150‑1 (MQ=255)
                                                                              aaGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAAt                                                                   <  2:618009/150‑1 (MQ=255)
                                                                              aaGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAAt                                                                   >  2:920987/1‑150 (MQ=255)
                                                                               aGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATa                                                                  >  2:2664064/1‑150 (MQ=255)
                                                                                   aaaTGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAgttg                                                              <  1:4679559/150‑1 (MQ=255)
                                                                                   aaaTGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAgttg                                                              >  1:2552183/1‑150 (MQ=255)
                                                                                      tGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTTATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGttgttg                                                           >  2:4467331/1‑150 (MQ=255)
                                                                                      tGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATAGACCTGAAAAAATATttgttg                                                           >  2:4715262/1‑150 (MQ=255)
                                                                                        tCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGttgttgac                                                         >  2:2840582/1‑148 (MQ=255)
                                                                                        tCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTgcc                                                         <  1:4711257/150‑1 (MQ=255)
                                                                                        tCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTgcc                                                         >  2:1364031/1‑150 (MQ=255)
                                                                                         cAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTgccg                                                        >  2:1789582/1‑150 (MQ=255)
                                                                                            cTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCt                                                     <  2:782201/150‑1 (MQ=255)
                                                                                                tGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGt                                                 >  2:3607940/1‑150 (MQ=255)
                                                                                                tGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGt                                                 >  1:3386003/1‑150 (MQ=255)
                                                                                                tGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGt                                                 <  2:2211719/150‑1 (MQ=255)
                                                                                                   aTACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAAc                                              >  2:4524819/1‑150 (MQ=255)
                                                                                                    tACTTTTTGATTGTTTGATATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACt                                             <  1:4620929/150‑1 (MQ=255)
                                                                                                    tACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACt                                             >  2:152144/1‑150 (MQ=255)
                                                                                                    tACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACt                                             <  1:2033293/150‑1 (MQ=255)
                                                                                                    tACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACt                                             >  1:209010/1‑150 (MQ=255)
                                                                                                     aCTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACta                                            <  1:4107868/150‑1 (MQ=255)
                                                                                                     aCTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACta                                            <  1:997594/150‑1 (MQ=255)
                                                                                                       tttttGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACtata                                          <  1:3850739/150‑1 (MQ=255)
                                                                                                           tGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAat                                      <  1:2146398/150‑1 (MQ=255)
                                                                                                            gATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAata                                     >  1:3095070/1‑150 (MQ=255)
                                                                                                              ttGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATAtt                                   <  2:4303895/150‑1 (MQ=255)
                                                                                                              ttGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATAtt                                   <  2:5176146/150‑1 (MQ=255)
                                                                                                              ttGTTTGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATAtt                                   <  1:986907/150‑1 (MQ=255)
                                                                                                                  ttGAGATTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGa                               >  1:3507092/1‑150 (MQ=255)
                                                                                                                     agaTTTATTTTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAg                            <  1:2441817/150‑1 (MQ=255)
                                                                                                                       atttatttTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGt                          >  2:2016477/1‑150 (MQ=255)
                                                                                                                         ttatttTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGttt                        <  2:864318/150‑1 (MQ=255)
                                                                                                                          tatttTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGtttt                       <  2:4627531/150‑1 (MQ=255)
                                                                                                                           atttTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTtttc                      >  1:2186275/1‑150 (MQ=255)
                                                                                                                           atttTCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTtttc                      >  1:1120796/1‑150 (MQ=255)
                                                                                                                              ttCATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTtttcttt                   <  1:2970481/150‑1 (MQ=255)
                                                                                                                                cATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCa                 <  1:5045436/150‑1 (MQ=255)
                                                                                                                                cATTTGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCa                 >  1:177176/1‑150 (MQ=255)
                                                                                                                                    tGAAATTATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAAtt             >  1:3633881/1‑150 (MQ=255)
                                                                                                                                         ttATAAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTTTGAAAGGTTTTCTTTCAAATTAGaaa        <  2:3747311/150‑1 (MQ=255)
                                                                                                                                          tataAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAAt       <  1:2803211/150‑1 (MQ=255)
                                                                                                                                           ataAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAAtg      <  2:3199357/150‑1 (MQ=255)
                                                                                                                                            taAAATAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAAtgt     <  1:1057841/150‑1 (MQ=255)
                                                                                                                                               aaTAAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAAtgttgt  >  1:4153746/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
TACTTGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCAGGTGATAAATGAGTTGTGATTAATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGT  >  CP009273/4561897‑4562189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: