| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,604,616 | C→A | 8.2% | G249C (GGC→TGC) | yjjW ← | putative pyruvate formate lyase activating enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,604,616 | 0 | C | A | 8.2% | 725.1 / 32.8 | 211 | G249C (GGC→TGC) | yjjW | putative pyruvate formate lyase activating enzyme |
| Reads supporting (aligned to +/- strand): ref base C (83/110); new base A (5/13); total (88/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 219 total aligned reads displayed.
TGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAAT > CP009273/4604467‑4604765 | tgtgCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGcc < 2:3621655/150‑1 (MQ=255) tgCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGt < 1:3418574/150‑1 (MQ=255) gCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTg < 1:4555437/150‑1 (MQ=255) cGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTggg > 2:3077268/1‑150 (MQ=255) aCCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCAt < 2:3242648/150‑1 (MQ=255) aCCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCAt < 2:2968471/150‑1 (MQ=255) ccGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATg < 1:4192772/150‑1 (MQ=255) aGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAc < 2:479460/150‑1 (MQ=255) aGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAc < 2:479106/150‑1 (MQ=255) aGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAc > 1:2982179/1‑150 (MQ=255) ggCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAcg < 2:2013332/150‑1 (MQ=255) cGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATCCACGCCGTGGGCATGAAACGCGt > 2:4823105/1‑150 (MQ=255) aTCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCa < 2:1177130/150‑1 (MQ=255) tCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAg > 1:3694776/1‑150 (MQ=255) ccGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATCCACGCCGTGGGCATGAAACGCGTTCAgg > 2:4541319/1‑150 (MQ=255) ccGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAgg < 2:578436/150‑1 (MQ=255) ccGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAgg < 1:1747245/150‑1 (MQ=255) cGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGc > 2:3142129/1‑150 (MQ=255) aTGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTAc > 2:3466227/1‑150 (MQ=255) gTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCg < 2:3216816/150‑1 (MQ=255) gTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGGGGGCATGAAACGCGTTCAGGCGTACCg > 2:1583498/1‑150 (MQ=255) cacaAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGa < 2:4587903/150‑1 (MQ=255) caAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAAc < 2:961488/150‑1 (MQ=255) aTAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATc < 2:1259535/150‑1 (MQ=255) aTAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATc < 1:4470894/150‑1 (MQ=255) gagCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGcc > 2:887575/1‑150 (MQ=255) cgcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAg > 1:3393940/1‑150 (MQ=255) gcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGt > 2:2196771/1‑150 (MQ=255) gcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGt < 1:2223038/150‑1 (MQ=255) gcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGt < 1:4807840/150‑1 (MQ=255) ccGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTc > 1:3940051/1‑150 (MQ=255) ccGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTc < 1:4638140/150‑1 (MQ=255) cGGAAAGATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCACCGAGTcc < 1:3916554/150‑1 (MQ=255) aaaTATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCtt < 2:1728525/150‑1 (MQ=255) aaaTATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCtt < 2:2413177/150‑1 (MQ=255) aaTATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTg > 1:1293790/1‑150 (MQ=255) atatCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGa < 1:1670319/150‑1 (MQ=255) tCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATaa < 2:1465823/150‑1 (MQ=255) cGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgcc < 2:2024241/150‑1 (MQ=255) ggCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgccg < 2:759503/150‑1 (MQ=255) cTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACgccgcc < 2:5160453/150‑1 (MQ=255) cTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACgccgcc < 2:2583354/150‑1 (MQ=255) aCCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGt > 1:1366097/1‑150 (MQ=255) aCCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGt > 1:3962499/1‑150 (MQ=255) cccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGttc > 2:4483025/1‑150 (MQ=255) cccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGttc > 2:1078240/1‑150 (MQ=255) cccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGttc < 2:3573979/150‑1 (MQ=255) ccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGttct < 1:4618036/150‑1 (MQ=255) gcgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGttcttc < 1:4121003/150‑1 (MQ=255) gcgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGttcttc < 1:4080380/150‑1 (MQ=255) cgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACCCGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCg < 1:2062137/150‑1 (MQ=255) cgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCg > 2:682190/1‑150 (MQ=255) cgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCg > 1:1013940/1‑150 (MQ=255) cgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCg > 1:740951/1‑150 (MQ=255) cgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTGCg > 1:1836400/1‑150 (MQ=255) cACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGAt > 1:5010168/1‑150 (MQ=255) cACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGAt > 2:935221/1‑150 (MQ=255) ccTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGAtgt > 1:1159125/1‑150 (MQ=255) ccTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGAtgt < 2:2520730/150‑1 (MQ=255) cTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGAtgtg < 2:2339608/150‑1 (MQ=255) tttAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATgtgt > 2:3378060/1‑150 (MQ=255) tAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTg > 1:2664205/1‑150 (MQ=255) cATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAaat > 2:1083235/1‑150 (MQ=255) tCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAaataa < 1:3657919/150‑1 (MQ=255) cAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAaataat < 1:2184255/150‑1 (MQ=255) ccAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCa > 1:4211520/1‑150 (MQ=255) cAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCAc > 2:4015460/1‑150 (MQ=255) aaCGGCTCAACGTCTTCCGGCGTGGCGCCCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCAcc < 1:1467968/150‑1 (MQ=255) cGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTg < 1:2300283/150‑1 (MQ=255) cTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGcc > 2:5145782/1‑150 (MQ=255) cTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGcc > 2:2993098/1‑150 (MQ=255) tCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCt > 2:5185986/1‑145 (MQ=255) cGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGa > 2:2767398/1‑150 (MQ=255) tCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTTATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATc < 1:5115185/150‑1 (MQ=255) cTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCa > 2:4152645/1‑150 (MQ=255) gTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCaaa > 2:3033895/1‑150 (MQ=255) gTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCaaa > 2:1833371/1‑150 (MQ=255) tGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAAc > 1:4865341/1‑150 (MQ=255) tCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGtt < 1:4895871/150‑1 (MQ=255) gCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTcc < 1:2824250/150‑1 (MQ=255) cccAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCg < 2:2259916/150‑1 (MQ=255) cccAGCTTTGCGCCTCACCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCg < 2:739285/150‑1 (MQ=255) ccAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGc > 2:3657380/1‑150 (MQ=255) aGCTTTGCGCCTCGCCATACACGCAGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCa > 2:3756615/1‑150 (MQ=255) cTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGc > 1:1034054/1‑150 (MQ=255) tttGCGCCTCGCCATACACCCCGTGGGCATGAAACCCGTTCAGGCGTACCGGAACAAAGCCGAGTCCCATGATAAACGCCGCCACTTCTTCGATGTGTTGCAAAAAATCCACCAGGCCAGGGATCACCAGCAAACGCAGTTACGCCAGCt > 2:4862413/1‑150 (MQ=255) ttGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCtt > 1:4706831/1‑150 (MQ=255) tGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTg > 1:4101659/1‑150 (MQ=255) gcgcCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATATACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGc < 1:4867947/150‑1 (MQ=255) cgcCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGcc > 1:3148855/1‑150 (MQ=255) cgcCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGcc > 1:957929/1‑150 (MQ=255) cTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCcgcg > 2:4020344/1‑150 (MQ=255) ccATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGctct < 1:1768667/150‑1 (MQ=255) tACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGcc > 1:329131/1‑150 (MQ=255) acacGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCa > 2:5070084/1‑150 (MQ=255) acacGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCa < 1:4525968/150‑1 (MQ=255) acGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGc < 1:4311267/150‑1 (MQ=255) acGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGc > 1:2489806/1‑150 (MQ=255) cGCCGTGGGCATGAAACGCGTTAATGCGTACCGGAACATGGCGGTGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCa < 1:887575/150‑1 (MQ=255) cGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAAt < 2:2236804/150‑1 (MQ=255) | TGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCAGTTCTTCGATGTGTTGCAAATAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAAT > CP009273/4604467‑4604765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |