| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,330,426 | Δ1 bp | 100% | intergenic (‑88/+111) | adiA ← / ← melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,330,426 | 0 | T | . | 93.3% | 710.1 / 46.1 | 164 | intergenic (‑88/+111) | adiA/melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (5/6); new base . (75/78); total (80/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 174 total aligned reads displayed.
ACGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAA > CP009273/4330277‑4330571 | aCGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAt < 1:3495212/150‑1 (MQ=255) ggCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttt < 2:4721660/150‑1 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttg < 1:2171397/150‑2 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttg < 1:3772466/150‑2 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttg > 1:1657064/1‑149 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAat > 2:4751360/1‑150 (MQ=255) aCCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAat > 2:2944188/1‑150 (MQ=255) cccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTa < 1:252240/150‑1 (MQ=255) ccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAg < 1:2078193/150‑1 (MQ=255) cAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGt > 1:1134060/1‑150 (MQ=255) aGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtt < 2:3537645/150‑1 (MQ=255) ggTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGttt < 1:467405/150‑1 (MQ=255) tgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTta < 2:4654146/150‑1 (MQ=255) tgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTta < 2:151208/150‑1 (MQ=255) cTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaa < 1:1232033/150‑1 (MQ=255) cTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATaa < 1:1232030/150‑1 (MQ=255) tGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAAc < 2:1865431/150‑1 (MQ=255) tGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAAc > 1:1047351/1‑150 (MQ=255) taTGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACa > 1:3344492/2‑150 (MQ=255) tGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAAt < 2:993190/150‑1 (MQ=255) tCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtgt < 1:3841133/150‑1 (MQ=255) tCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtgt < 1:223653/150‑1 (MQ=255) cGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTAtgt < 1:1320456/150‑1 (MQ=255) gCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGa > 1:4600028/1‑150 (MQ=255) ttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGatta < 2:3221626/150‑1 (MQ=255) aacaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAttt > 1:4115878/1‑150 (MQ=255) aacaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAttt > 2:4137979/1‑150 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAttt < 1:3800835/150‑1 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAtttt > 2:3879979/1‑150 (MQ=255) caaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTa < 2:1185179/150‑1 (MQ=255) aaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaa > 2:2818175/1‑150 (MQ=255) aTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaaa > 2:4025397/1‑150 (MQ=255) ttAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaaa < 1:3994840/150‑1 (MQ=255) tAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatt > 1:1366962/1‑150 (MQ=255) aaTACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatta < 2:4715926/150‑1 (MQ=255) aaTACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatta < 1:1036500/150‑1 (MQ=255) tACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattatt > 2:3834316/1‑150 (MQ=255) tACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattatt < 1:1798627/150‑1 (MQ=255) aCTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattatt < 2:2047795/150‑1 (MQ=255) aCTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAttt < 1:2653389/150‑1 (MQ=255) aCTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAttt < 2:1878762/150‑1 (MQ=255) tttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTc > 1:1855671/1‑150 (MQ=255) ttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCa < 2:1386838/150‑1 (MQ=255) catcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACt > 1:3062126/1‑150 (MQ=255) catcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACt > 2:2170927/1‑150 (MQ=255) atcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTCTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTg < 2:3372873/150‑1 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt < 1:2559740/150‑1 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 2:1952416/1‑150 (MQ=255) ttACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTtattat > 1:2396229/1‑150 (MQ=255) ttACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTtattat > 2:1127580/1‑150 (MQ=255) ttACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTtattat > 2:1125282/1‑150 (MQ=255) ttACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTtattat < 1:2186612/150‑1 (MQ=255) aCCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATc < 1:3476754/150‑1 (MQ=255) aCCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCg < 2:2333662/150‑1 (MQ=255) cccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGa > 1:4540350/1‑150 (MQ=255) gTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGc > 2:1039027/1‑150 (MQ=255) aTGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCCGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTaa < 1:2987866/150‑1 (MQ=255) ggAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAt < 1:591134/150‑1 (MQ=255) aaTCTTCGTTGCGGTCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTTAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt < 1:3203455/150‑1 (MQ=255) aTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAtttt < 2:953053/150‑1 (MQ=255) aTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TATTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAtttt < 2:1914033/150‑1 (MQ=255) ttCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTATACTCttttttt > 2:3591775/1‑150 (MQ=255) ttCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttttttt > 2:3591770/1‑150 (MQ=255) gTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGc > 2:1254730/1‑150 (MQ=255) gTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TGTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGc > 2:1536110/1‑150 (MQ=255) tGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctg < 2:90906/150‑1 (MQ=255) ggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGAGTTAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatac < 2:3284246/150‑1 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga > 1:3620259/1‑150 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga < 1:2859074/150‑1 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga < 1:2792090/150‑1 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga < 1:2732939/150‑1 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga < 1:4137979/150‑1 (MQ=255) aaGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactga < 1:360666/150‑1 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat < 1:1253278/150‑1 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat < 1:1736950/150‑1 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgat < 1:3412469/150‑1 (MQ=255) gTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGTctgatactgata > 2:3819685/1‑150 (MQ=255) gTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatactgata > 2:445314/1‑150 (MQ=255) cGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCttt > 2:1253697/1‑150 (MQ=255) ggCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTa < 1:3194972/150‑1 (MQ=255) ggCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTa < 2:1134070/150‑1 (MQ=255) gCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAg > 2:1631188/1‑150 (MQ=255) tCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGACGGGa > 2:3288003/1‑150 (MQ=255) cGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGaa < 2:3638647/150‑1 (MQ=255) gCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGCGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACg < 2:564407/150‑1 (MQ=255) tGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTc > 1:4001755/1‑150 (MQ=255) tAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTTTCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTg > 2:571079/1‑150 (MQ=255) tAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTg > 2:4248446/1‑150 (MQ=255) aaaGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTg > 1:722292/1‑150 (MQ=255) aaaGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTgg > 2:2198322/1‑150 (MQ=255) aaaGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTgg > 1:1539460/1‑150 (MQ=255) aGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcg > 1:2440347/1‑150 (MQ=255) cgcgTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcggc < 2:1685144/150‑1 (MQ=255) gTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCt > 1:1272498/1‑150 (MQ=255) aaaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt < 1:4401425/150‑1 (MQ=255) aaaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt < 1:2959323/150‑1 (MQ=255) acaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCt > 2:3814631/1‑150 (MQ=255) aaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTaa > 1:1822703/1‑150 (MQ=255) aaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTaa > 1:4207985/1‑150 (MQ=255) aaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTaa > 2:252011/1‑150 (MQ=255) | ACGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAA > CP009273/4330277‑4330571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |