| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 1,428,894 | IS2 (–) +5 bp | 69.8% | intergenic (‑413/+317) | ynaE ← / ← ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1428894 = | 51 (0.200) | 122 (0.460) | 79/278 | NT | 69.7% | intergenic (‑413/+321) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | = 1463497 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | CP009273 | = 1428898 | 51 (0.200) | 114 (0.430) | 70/278 | NT | 68.3% | intergenic (‑417/+317) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | 1462167 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
Only 100 of 309 total aligned reads displayed.
CGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTT > CP009273/1428750‑1429046 | ttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaag > 1:1461054‑M1/145‑150 (MQ=255) ttCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTgaagaag > 2:4236136/1‑150 (MQ=39) ttCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTgaagaag > 2:1247947/1‑150 (MQ=39) aGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggattt < 1:2562553‑M1/150‑8 (MQ=255) tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAata > 2:2053415‑M1/135‑150 (MQ=255) ggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAatat > 2:1312697‑M1/134‑150 (MQ=255) gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATc > 2:4205014‑M1/133‑150 (MQ=255) cAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCa < 1:4156159/150‑1 (MQ=39) cgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAg > 2:740577‑M1/130‑150 (MQ=255) cgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTg > 1:1407795‑M1/127‑150 (MQ=255) cgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTg < 1:1432404‑M1/24‑1 (MQ=255) aTGCTAACAGGTGGCGGCAAAAATCTGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatattt < 1:1773238‑M1/150‑20 (MQ=255) aTGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatattt < 2:358732‑M1/150‑20 (MQ=255) aTGCTAACAGGGGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatattt < 2:3789725‑M1/150‑20 (MQ=255) gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGa < 2:2148449‑M1/25‑1 (MQ=255) gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGa < 2:3959812‑M1/25‑1 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGata > 2:3618936‑M1/124‑150 (MQ=255) ctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGata > 1:765385‑M1/124‑150 (MQ=255) cTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttcca < 1:2732312‑M1/150‑23 (MQ=255) cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAg > 1:4174088‑M1/121‑150 (MQ=255) cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAg > 1:3639380‑M1/121‑150 (MQ=255) cAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGc < 1:2097496/150‑1 (MQ=39) ctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCtat < 1:3454016‑M1/35‑1 (MQ=255) ggcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCtata < 2:615443/150‑1 (MQ=39) gcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgtt < 2:929018‑M1/150‑33 (MQ=255) gcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgtt < 1:190356‑M1/150‑33 (MQ=255) cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCtt > 1:1097659‑M1/109‑150 (MQ=255) aaaaaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcac < 1:3743169‑M1/150‑38 (MQ=255) acgacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGa > 2:4278163‑M1/106‑150 (MQ=255) aTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaa < 2:4262252‑M1/150‑42 (MQ=255) ggCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaaccca < 2:4430804‑M1/150‑46 (MQ=255) ggCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCgg < 1:1085544/150‑1 (MQ=37) tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCgga < 1:1003853‑M1/51‑1 (MQ=255) tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCgga < 1:4012058‑M1/51‑1 (MQ=255) aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCggagg < 2:2971423‑M1/53‑1 (MQ=255) tttATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattaca > 2:3715225‑M1/1‑100 (MQ=255) atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaatg < 2:4173786‑M1/57‑1 (MQ=255) aTGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaatga < 1:92519/150‑1 (MQ=37) tGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaatgaa > 1:4137652/1‑150 (MQ=37) cgcAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgc < 1:3851697‑M1/150‑58 (MQ=255) tctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGACTGAAtgtg < 1:3838492‑M1/63‑1 (MQ=255) ctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGACTGAATGTGa < 1:2892145‑M1/64‑1 (MQ=255) cAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGa < 1:4542030/150‑1 (MQ=37) tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGAt > 1:3044677‑M1/86‑150 (MQ=255) aaGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc > 2:4551439‑M1/1‑90 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGAGGAGGAATGAATGTGATg < 1:254238‑M1/66‑1 (MQ=255) tGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca > 2:1958554‑M1/1‑86 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTg > 1:484762‑M1/79‑150 (MQ=255) aGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat > 1:1312608‑M1/1‑83 (MQ=255) aGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTg < 2:1390666/150‑1 (MQ=37) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGa > 2:3537317‑M1/78‑150 (MQ=255) tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGAt < 1:2807065‑M1/74‑1 (MQ=255) ggCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGTGATTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt < 2:4457041‑M1/150‑71 (MQ=255) agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATg < 2:3904099‑M1/75‑1 (MQ=255) gCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc < 2:2561288‑M1/150‑72 (MQ=255) tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTa > 2:2433535‑M1/74‑150 (MQ=255) cAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTa > 2:2098822/1‑150 (MQ=34) aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTg < 1:4323657‑M1/81‑1 (MQ=255) cAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAttgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc < 2:4599299‑M1/150‑79 (MQ=255) aaaCTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg > 1:4631327‑M1/1‑71 (MQ=255) aaCTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATa < 2:3864433/150‑1 (MQ=34) tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAg > 2:3157322‑M1/65‑150 (MQ=255) aCTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAg < 2:2039866/150‑1 (MQ=34) agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGt < 2:3273799‑M1/87‑1 (MQ=255) aTCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTg > 2:4264103/1‑150 (MQ=34) ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGaa < 1:1933908‑M1/91‑1 (MQ=255) ttATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGaaa < 1:3357077/150‑1 (MQ=34) taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGaaa < 2:631708‑M1/92‑1 (MQ=255) aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGaaaa < 2:133749‑M1/93‑1 (MQ=255) cttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCa > 1:1850973‑M1/48‑150 (MQ=255) cttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCa > 2:260816‑M1/48‑150 (MQ=255) ctctACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCa < 1:2649446/150‑1 (MQ=34) tctACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcacta > 1:1531158‑M1/1‑51 (MQ=255) tACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg < 2:3397880‑M1/150‑102 (MQ=255) cGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga > 2:2222529‑M1/1‑45 (MQ=255) agtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTAt < 2:1071207‑M1/111‑1 (MQ=255) gtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATg < 1:3417196‑M1/112‑1 (MQ=255) tGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcca > 2:1692884‑M1/1‑40 (MQ=255) tGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcca < 1:4304836‑M1/150‑111 (MQ=255) atattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCaa < 1:3723264‑M1/115‑1 (MQ=255) tattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAg > 2:2867761‑M1/35‑150 (MQ=255) gggTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat > 2:2377823‑M1/1‑39 (MQ=255) ggTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt > 1:3373326‑M1/1‑38 (MQ=255) gTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc > 2:2342143‑M1/1‑37 (MQ=255) tttAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAAc < 1:3929491/150‑1 (MQ=255) ttAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt > 1:638849‑M1/1‑35 (MQ=255) aaaaGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta > 1:229045‑M1/1‑33 (MQ=255) tgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGtgc < 1:1220637‑M1/123‑1 (MQ=255) gTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat < 2:275561‑M1/150‑122 (MQ=255) aCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc > 2:3145506‑M1/1‑25 (MQ=255) cAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctct < 2:1778685‑M1/150‑136 (MQ=255) ccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttg > 1:1738136‑M1/9‑150 (MQ=255) ttATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttgattg > 2:4127054/1‑150 (MQ=255) tctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttgattg < 2:1297350‑M1/146‑1 (MQ=255) aTCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt < 2:347860‑M1/150‑144 (MQ=255) tGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt < 2:1018883‑M1/150‑147 (MQ=255) gaagaagaaAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGt > 2:1545955/1‑150 (MQ=255) gAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt > 2:4665545‑M1/1‑3 (MQ=255) gAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt < 2:515924‑M1/150‑148 (MQ=255) gAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt < 1:3563559‑M1/150‑148 (MQ=255) | CGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTT > CP009273/1428750‑1429046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |