New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3179456 =NA (NA)4 (0.020) 4/276 NT 1.5% intergenic (+8/‑90) yqiG/insC1 pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein/IS2 repressor TnpA
?CP009273 = 3284626 257 (0.960)coding (2454/2517 nt) yraJ putative outer membrane protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 293 total aligned reads displayed.

CTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTG  >  CP009273/3284479‑3284775
                                                                                                                                                   |                                                                                                                                                     
cTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCttt                                                                                                                                                     >  2:3589153/1‑150 (MQ=255)
  ttGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCa                                                                                                                                                   <  2:192151/150‑1 (MQ=255)
    ggCGCTCTTTCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCTGATCAACAATGTCAGTTTGCTTTCAGt                                                                                                                                                 <  2:3367629/150‑1 (MQ=255)
     gcgcTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTa                                                                                                                                                <  2:58700/150‑1 (MQ=255)
      cgcTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTac                                                                                                                                               >  2:2203420/1‑150 (MQ=255)
        ctctTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTacac                                                                                                                                             >  2:418517/1‑150 (MQ=255)
          ctTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCg                                                                                                                                           <  1:1327055/150‑1 (MQ=255)
           ttGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCgg                                                                                                                                          <  1:3973818/150‑1 (MQ=255)
             gCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGAt                                                                                                                                        <  2:1177263/150‑1 (MQ=255)
             gCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGAt                                                                                                                                        >  1:244600/1‑150 (MQ=255)
              ccAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGAtt                                                                                                                                       >  2:2966489/1‑150 (MQ=255)
               cAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTc                                                                                                                                      >  2:2770448/1‑150 (MQ=255)
               cAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTc                                                                                                                                      >  2:1259869/1‑150 (MQ=255)
                aGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCa                                                                                                                                     >  2:855217/1‑150 (MQ=255)
                aGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCa                                                                                                                                     <  1:2690163/150‑1 (MQ=255)
                      gatgatACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCt                                                                                                                               >  2:1856135/1‑150 (MQ=255)
                        tgatACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTAc                                                                                                                             <  2:746732/150‑1 (MQ=255)
                        tgatACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTAc                                                                                                                             <  1:2199410/150‑1 (MQ=255)
                        tgatACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTAc                                                                                                                             <  2:4173281/150‑1 (MQ=255)
                          atACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACaa                                                                                                                           <  1:3001857/150‑1 (MQ=255)
                           tACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAAc                                                                                                                          >  2:619773/1‑150 (MQ=255)
                            aCGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAAcc                                                                                                                         <  2:1985704/150‑1 (MQ=255)
                             cGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACct                                                                                                                        <  2:1958142/150‑1 (MQ=255)
                              ggggCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACctc                                                                                                                       >  2:3150263/1‑150 (MQ=255)
                              ggggCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACctc                                                                                                                       >  2:1434705/1‑150 (MQ=255)
                                ggCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTg                                                                                                                     <  1:3180950/150‑1 (MQ=255)
                                ggCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTg                                                                                                                     >  2:2791509/1‑150 (MQ=255)
                                 gCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAGCCTCTGt                                                                                                                    <  2:2808601/150‑1 (MQ=255)
                                    acaaAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTAtt                                                                                                                 <  2:2191364/150‑1 (MQ=255)
                                    acaaAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTAtt                                                                                                                 >  2:3480492/1‑150 (MQ=255)
                                    acaaAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTAtt                                                                                                                 >  2:471506/1‑150 (MQ=255)
                                    acaaAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTAtt                                                                                                                 <  1:3834454/150‑1 (MQ=255)
                                    acaaAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTAtt                                                                                                                 <  2:3320269/150‑1 (MQ=255)
                                     caaAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTa                                                                                                                <  2:2385439/150‑1 (MQ=255)
                                       aaGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACa                                                                                                              >  2:4322055/1‑150 (MQ=255)
                                       aaGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACa                                                                                                              >  2:127146/1‑150 (MQ=255)
                                        aGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTTAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACaa                                                                                                             >  1:4563226/1‑150 (MQ=255)
                                        aGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACaa                                                                                                             >  1:4072439/1‑150 (MQ=255)
                                         gTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAg                                                                                                            >  2:37966/1‑150 (MQ=255)
                                         gTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAg                                                                                                            <  1:4688881/150‑1 (MQ=255)
                                          tATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAgg                                                                                                           <  2:2481503/150‑1 (MQ=255)
                                            tcgtcgATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGca                                                                                                         <  2:4134592/150‑1 (MQ=255)
                                              gtcgATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGcaca                                                                                                       <  2:2606845/150‑1 (MQ=255)
                                              gtcgATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGcaca                                                                                                       >  1:3663201/1‑150 (MQ=255)
                                                cgATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAgc                                                                                                     <  2:3629004/150‑1 (MQ=255)
                                                cgATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAgc                                                                                                     <  2:4530125/150‑1 (MQ=255)
                                                   tGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCa                                                                                                  >  1:2290611/1‑150 (MQ=255)
                                                    gAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAg                                                                                                 >  2:1718521/1‑150 (MQ=255)
                                                     aGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGt                                                                                                <  1:2129198/150‑1 (MQ=255)
                                                         cggcATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCa                                                                                            <  2:3946384/150‑1 (MQ=255)
                                                          ggcATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCAt                                                                                           <  1:1551046/150‑1 (MQ=255)
                                                            cATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTa                                                                                         <  1:3867804/150‑1 (MQ=255)
                                                            cATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTa                                                                                         <  1:2773959/150‑1 (MQ=255)
                                                            cATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTa                                                                                         <  1:3424894/150‑1 (MQ=255)
                                                            cATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTa                                                                                         >  1:2379730/1‑150 (MQ=255)
                                                            cATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTa                                                                                         >  2:101935/1‑150 (MQ=255)
                                                              tACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCACCAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAg                                                                                       <  1:2598369/150‑1 (MQ=255)
                                                              tACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAg                                                                                       >  2:772470/1‑150 (MQ=255)
                                                               aCTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAgg                                                                                      <  2:1654456/150‑1 (MQ=255)
                                                               aCTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAgg                                                                                      <  2:1208650/150‑1 (MQ=255)
                                                                cTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGa                                                                                     <  2:2073715/150‑1 (MQ=255)
                                                                cTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGa                                                                                     <  1:654003/150‑1 (MQ=255)
                                                                 tataTCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGAt                                                                                    >  1:3314208/1‑150 (MQ=255)
                                                                   acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATaa                                                                                  <  2:3999817‑M2/75‑1 (MQ=255)
                                                                                tatCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAaga                                                                     >  1:3716008/1‑150 (MQ=255)
                                                                                  tCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACCACCTCTGTATTACCAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAgc                                                                   <  2:3312830/150‑1 (MQ=255)
                                                                                          aTCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTta                                                           >  1:144618/1‑150 (MQ=255)
                                                                                          aTCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTta                                                           >  1:2517009/1‑150 (MQ=255)
                                                                                           tCACAAAGCTGGACTGTACGCTGGGTAAATCTGTCATATCAAAATTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCTTTAAGTATAAAAAAATGAAAAGAGCGCCTCTtat                                                          <  2:189108/150‑1 (MQ=255)
                                                                                            cacaAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTtata                                                         >  2:2635122/1‑150 (MQ=255)
                                                                                              caAAGATGGACTGTACGTTGGGGAATTCAGTCAGATCAACAATGTCATTTTGCTTTCATTACACCGGATTCATAACCTACAAACTCTTTATTACAAGGCACAGCGCAGTGCCATTATGGATAAAAAAATGAAAATAGCGCCTCTTATAAc                                                       <  2:2935140/150‑1 (MQ=255)
                                                                                               aaaGCTGGACTGTACGCTGGGGAAATCAGGCATATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACATCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACa                                                      <  2:2204465/150‑1 (MQ=255)
                                                                                               aaaGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACa                                                      >  1:3459670/1‑150 (MQ=255)
                                                                                               aaaGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACa                                                      >  2:4270774/1‑150 (MQ=255)
                                                                                                aaGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAg                                                     <  2:349886/150‑1 (MQ=255)
                                                                                                 aGCTGGATTTTACGATGGGGAAATCAGGCATATAAACAATTTCTTTTTGCTTTCAGTACACCGTATTAATAACCTAAAACCTCTGTATTACAAGGCAAAGCGAAGTGCAATTATGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAgg                                                    <  2:4385170/150‑1 (MQ=255)
                                                                                                      gACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCttt                                               >  1:2029189/1‑150 (MQ=255)
                                                                                                       aCTGTACGCTGGTGAAATCAGGCAGATAAAAAATGTCAGTTTGCTTTCAGTACACCGGATTCATAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTATGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCtttt                                              <  2:3744375/150‑1 (MQ=255)
                                                                                                       aCTGTACGCTGGGGAAATCAGGAAGATCAACATTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCtttt                                              <  1:3139909/150‑1 (MQ=255)
                                                                                                        cTGTACGCTGGGTAAATCTGGCTTATCAACAATGTCAGTTTGCTTTCTGTAAACCGGATTCAGAACCTACAACCTCTGTATTAAAAGGCAATGCGCAGTGCAATTATGTTTAAAAAAATGAAACGAGCGCCTCTTATAACAGGTCTTttg                                             <  1:2753071/150‑1 (MQ=255)
                                                                                                        cTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTttg                                             >  1:1050452/1‑150 (MQ=255)
                                                                                                         tGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTAAAACCTCTGTTTTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTttgt                                            <  2:4236354/150‑1 (MQ=255)
                                                                                                           tACGCTGGGGAAATCAGGCAGATCAAAATTGTCTTTTTGATTTCAGTACACCGGATTCACAACCTACACCCTCTTTATTACACGGCACAGCGCAGTGCAATTAAGGATAAAAAAATGAAAACAGCGCCTCTTATAACAGGTCTTttgttg                                          <  1:2625617/150‑1 (MQ=255)
                                                                                                            aCGCTGGGTAAATCAGGAATATAAACAATTTATTTTTTCTTTCAGTACACCGTATTCACAACCTACAACCTATGTATTAAACGGCACAGCGCAGTGCAATTAAGTATAAAAAATTCAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGa                                         <  1:871388/150‑1 (MQ=255)
                                                                                                              gCTGGGGAAATCAGGAAGATCAACATTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTTTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGata                                       <  1:1138041/150‑1 (MQ=255)
                                                                                                                   gtaaaTCAGGCAGATCAAAAATGTCATTTTGCTTTCAGTACACCGGATTCACAACCTACAACCTCTTTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCcac                                  <  1:4294549/148‑1 (MQ=255)
                                                                                                                       aTCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATcc                              >  2:4038025/1‑150 (MQ=255)
                                                                                                                       aTCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATcc                              <  2:1537442/150‑1 (MQ=255)
                                                                                                                        tCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAACGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCt                             <  2:3690898/150‑1 (MQ=255)
                                                                                                                           ggaataTCAACATTGTCATTTTTTTTTCAGTACACGGTATTCAGAACCTACAACCTTTTTATTACATGGCACAGGGCAGTGCATTTATGTATAAAAAAATTAAATGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTgcg                          <  1:504705/145‑1 (MQ=255)
                                                                                                                           aaatataggggcaaatccaTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTgcg                          >  1:3930912‑M2/20‑150 (MQ=255)
                                                                                                                                 tCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATg                    >  2:2235062/1‑150 (MQ=255)
                                                                                                                                 tCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATg                    >  2:272305/1‑150 (MQ=255)
                                                                                                                                   aacaaTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGcc                  >  1:169351/1‑150 (MQ=255)
                                                                                                                                    acaaTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCCGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGcct                 <  1:1840688/150‑1 (MQ=255)
                                                                                                                                      aaTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCAATTATGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGcctcc               <  1:619757/150‑1 (MQ=255)
                                                                                                                                         gTCCGTTTGCTTTCAGTACCCCGGTTTCAGAACCTACCCCCTGTGTATTACCCGGCACCGGGCTGGGCCATTACGGATAACAAACTGAAAAGCGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCa            <  1:1275073/150‑1 (MQ=255)
                                                                                                                                          tCATTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCag           <  2:1059353/150‑1 (MQ=255)
                                                                                                                                           cAGTTTGATTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCagg          <  2:4666580/150‑1 (MQ=255)
                                                                                                                                                 gCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGgtg    >  2:386211/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTG  >  CP009273/3284479‑3284775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.