| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 8.3% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 8.3% | 606.7 / 5.2 | 209 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (99/87); new base T (2/21); total (101/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.27e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 210 total aligned reads displayed.
TGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118359‑1118654 | tGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAgg < 2:380194/150‑1 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTaa < 1:876256/150‑1 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTGTGTCTAACCAAAAGGGGGTTCATGTGCAGATTGGGGTCGCCCGTTAGGGtta > 1:1979564/1‑148 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc > 2:261781/1‑150 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc < 2:2684343/150‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCtt > 2:3307140/1‑150 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGGTAATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt > 2:932404/1‑150 (MQ=255) cATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt < 2:2934804/150‑1 (MQ=255) cATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTATGACTACCGAACAGGGAGGTCAAGTCCAGATTGGCGTCTCCGGTTAGGGTAACCatat > 1:3783814/1‑150 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt > 2:2331343/1‑150 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAtt < 1:3124865/150‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGAGCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCAAGTCCAGATTGGCGGCTCCGGTTAGGGTAACCATaat > 2:4387365/1‑148 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTTAAAACCCAACAAGGACTTAATGTCCAGAATTGCGTCTCCGGTTATGGTAAACATATTAgg > 1:459675/1‑150 (MQ=255) aCCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGc < 2:2292539/150‑1 (MQ=255) ccACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGct < 1:1480045/150‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 1:260983/150‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt > 2:3346379/1‑150 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTc < 1:117115/150‑1 (MQ=255) cATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGAATAACCAAACGGGAGTTTATTTCCAGATTTGGGTCGCCGGTTTGGGGAAACATATTAGGCTCTTcgcg > 1:2812707/1‑150 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACCAACAGGGAGTTAATTTACAGAATTGCGTCTACGGTTATGGTAACCATATTAGGCTCTTagcgcc > 1:548732/1‑148 (MQ=255) ctctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGAcc < 1:648117/150‑1 (MQ=255) ctctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGAcc > 2:2962600/1‑150 (MQ=255) tttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAt < 1:59100/150‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTGTGTCTACCGAACAGGGGGGTCCTGTCCAGAATGGGGTCTCCGGGTAGGGTAAACAGATTCGGCGCAGCGCGACCCAATTg > 1:1599113/1‑150 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTgg < 2:520887/150‑1 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACCGGGAGTTCATGTCCAGGTTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTAGCGACCAATTTgg > 2:2823979/1‑150 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACAAACGAACAGGGAGGTCATGTCCCGATTTGCGGCTCCGGTTAGGGTAAACTTTTTCGGCGCGTGGCGCCCAAatttg > 1:2390053/1‑148 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGTCTACCGAACAGGGGGGTCATGTCCAGATTGGCGGCGCCCGGTAGGGTAACCGTATTAGGCTCGTCGCGACCAATTTTGcgg > 1:2161618/1‑148 (MQ=255) aGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTgg < 1:3754983/150‑1 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAACTTATTCGGCTCGTCGCGACCAATTTGGCTGGTc > 2:3269818/1‑150 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTGGCTGGTc > 2:2215620/1‑150 (MQ=255) tCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCa > 1:3912272/1‑150 (MQ=255) cGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAg < 2:3890701/150‑1 (MQ=255) cGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTTGCTGGTCAg > 1:2297794/1‑150 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAgg < 1:732671/150‑1 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGttt < 1:1859120/150‑1 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGAATACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAAATTTGCTGGTCAGGttt > 1:4224129/1‑150 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTg < 2:68393/150‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTAATTTCCAGATTTGCGTCTCCGGTTATGGTAACCTTATTAGGCTCTTCGCGACCAAATTGGCTGGTCAGGtttt > 1:1919459/1‑149 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGt < 2:2637491/150‑1 (MQ=255) tttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGt < 1:3213483/150‑1 (MQ=255) tttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCa < 1:34472/150‑1 (MQ=255) tttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAATTTGGCTGGTCAGGTTTGTCa > 2:3076223/1‑150 (MQ=255) tttATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAAc < 1:1705468/150‑1 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGGGTTCATGTCCAGATTGGCGTCGCCGGTTAGGGTAAACTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAat > 2:1327246/1‑150 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGCGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAAACTTATTCGGCTCTTCGCGCACAATTTTGCGGGTCAGGTTTGTCAGAACAat > 2:1995212/1‑150 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAatat < 1:2204994/150‑1 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAACTTATTAGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAatatt > 2:1791454/1‑149 (MQ=255) cacacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 2:637513/149‑1 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTGGCTGGTCAGGTTTGTAAGAACAATATGGGc > 2:4142505/1‑150 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCAAGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCGCTTCGCGACCAATTTGGCGGGGCCGGTTTGTCAGAACAAAATGGGc > 2:4142865/1‑150 (MQ=255) gggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTc < 2:4720050/150‑1 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCa < 1:2207834/150‑1 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTCTGACTACCCAACAGGGAGTTCATGTCCAGATTGGCGTCTCCCGTTAGGGTAACCATATTCGGCTCGTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCa > 1:4279896/1‑150 (MQ=255) aGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTAACGAAAAGGGAGTTCAAGTACAGATTTGCGTCTCCGGTTAGGGTAAACTTATTAGGCTCTTAGCCACCAATTTGGCTGGTCAGGTTTTTAAGAACAAAATTGGCGTCAGcc > 1:1497060/1‑150 (MQ=255) gcgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCa < 1:967546/150‑1 (MQ=255) cgcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc < 2:247126/150‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACg < 1:1786351/150‑1 (MQ=255) cTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCACCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGc > 2:793006/1‑150 (MQ=255) gCTTCTGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTa < 2:3491991/150‑1 (MQ=255) tatgTTTCTTGGTCGCTTTCTGACTACCGAACAGGTAGTTCTTTTCCAGTTTGGCGTCTCCGGTTAGGGTAACATTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACATTTTGGGCGTCAGCCACGCCGGGTAAAc < 2:3152880/147‑1 (MQ=255) cAGTTTCTTGGTCGATTTCTGACTACCGAACTGGGAGTTCTTGTCCTGATTGGCGTCTCCGTTTTGTGTAACCTTTTTCGGCTCTGCGCGCCCAATTTGGCTGGTATGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcc < 2:91141/150‑1 (MQ=255) cATGGTCGCTTTCTGACTACCGAACCGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCTACAGCCACGCCGGGTAAACCGATATc < 2:2708307/150‑1 (MQ=255) aTGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACACCGGGTAAACCGATATCt < 1:3458462/150‑1 (MQ=255) tGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTGGCTGGTCAGGTTTTTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt > 1:3284335/1‑150 (MQ=255) tGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt > 2:1083114/1‑150 (MQ=255) tGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAAATTTGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt > 1:2836851/1‑150 (MQ=255) tGGTCGCTTACTGACTACCGAACTGGGTGTTCATGACCAGTTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCCACAAATTGGGCTGGACAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt < 2:3206655/150‑1 (MQ=255) tCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTg > 1:2881085/1‑150 (MQ=255) cgcccccccGAACAGGGAGTTCAGGCCCCGACGGGCGTCTCCGGTTAGGGTACCCAAATTCGCCTCTACGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:2627203/143‑1 (MQ=255) cTGACTACCGACCAGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTGGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:2091101/150‑1 (MQ=255) cTGACTACCGAACAGGGAGTTCATGTCCTTATTGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTCTTCGCGACCAATTTGGGTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatt < 2:3711333/150‑1 (MQ=255) tGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta > 2:3686713/1‑150 (MQ=255) tGACAACCGAACCGGGTGTTCATGTCCTGTTTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCACTTCGCGACAAATTTGGGTGGTCTGGTTTGTCATAAAAATTTGGGCGCCCGCCACGCCGGGTAAACCGATATCTTTTGAGAAatta < 1:1051124/150‑1 (MQ=255) cTACCGAACAGGGAGTTCATGTCCATTTTGGCGTATCCGTTTTGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCAGTTTTGTCATAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttatta < 1:2287684/150‑1 (MQ=255) ccGAACTGGGTTTTCTTGTCCTGTTTGGCGTCTCGGTTTTGGTTAACCTTATTCGGCTCTTCGCGACAATTTGGGCTGTTCTGTTTTGTAATAAAAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGt < 1:3076223/150‑1 (MQ=255) cGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGtt > 1:3184699/1‑150 (MQ=255) gAACAGGGTGTTCTTGTCCTTATTGGCGTCTCGGGTTTGGGTAACCTTATTCGGATCTTCGCGACCATTTTGGCTGGTCTGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGttt < 1:3522171/150‑1 (MQ=255) aaCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc < 2:1465181/150‑1 (MQ=255) aGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCa > 1:267262/1‑150 (MQ=255) aGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCa > 1:864640/1‑150 (MQ=255) gggAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCaa > 1:1385384/1‑150 (MQ=255) aGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAACTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCTTCAGACACGCCGGGTAAACCGATATCTTTTTAGAAATTATTATGTTTCGAAAGCg > 2:284118/1‑150 (MQ=255) ttCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGAc > 1:3371865/1‑150 (MQ=255) tattGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCAGGTTTGTCATAACAATAGGGGCGTCAGCCACGCCGGGTAAACCGACATCTTTTGAGAAATTATTATGTTTCGCAAGCGACt < 2:992677/147‑1 (MQ=255) tCATGTCCAGATTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACt < 2:3426340/150‑1 (MQ=255) cttGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCCGGTTTGTCAGAACAATAGGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg < 2:570176/148‑1 (MQ=255) cATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg > 1:4364209/1‑150 (MQ=255) cATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg < 2:1573081/150‑1 (MQ=255) tGTCCAGTTGGGCGTCTCGGTTTAGGTTAACCTTATACGGCTCTTCGCGACAAATTTGGCTGGTCAGGTTTGTCATAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGt < 2:3050242/150‑1 (MQ=255) tCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTa > 2:4353497/1‑150 (MQ=255) gATGGGGGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTGGTCAGAACAATCTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt < 2:3924636/150‑1 (MQ=255) tttGGCGTCTCGGTTTTGGTTAACCTTTTACGGCTCTTCGCCAAAATTTTGGTTGTTATGTTTTTAAACAAAAATAGGGGCTTCAGCAACGCCGGGTAAACCGATATATTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 2:1375413/149‑1 (MQ=255) aTTGGCGTCTCCGGTTTGGGTAACCTTTTTCGGCTCTTCGCGACAAATTGGGGTGGTCAGGTTTGTCTGAACAATAGGGGCGTCACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc < 2:4165276/150‑1 (MQ=255) ttGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCt > 2:3407907/1‑150 (MQ=255) tGGCGTCTCGGTTTTGTTTAACGTTATTGGGCTATTCGCGACAATTTTGGCTGGTCTGTTTGTTCATAACAATTTGGGCTTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGAAAGCGACTGGTTAATTTCtt < 2:997081/150‑1 (MQ=255) tcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGt > 1:1273691/1‑150 (MQ=255) ccGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTg > 1:280440/1‑150 (MQ=255) cGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTGTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGa > 2:1160288/1‑150 (MQ=255) tAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGgt > 1:1975177/1‑150 (MQ=255) | TGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118359‑1118654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |