| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,386,008 | G→T | 93.6% | Q35K (CAG→AAG) | ycjY ← | S9 homolog non‑peptidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,386,008 | 0 | G | T | 93.6% | 652.2 / 29.9 | 215 | Q35K (CAG→AAG) | ycjY | S9 homolog non‑peptidase family protein |
| Reads supporting (aligned to +/- strand): ref base G (3/12); new base T (66/133); total (70/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 218 total aligned reads displayed.
CTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGAT > CP009273/1385861‑1386154 | cTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTAt > 2:1959460/1‑150 (MQ=255) tAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTtata < 2:4188892/150‑1 (MQ=255) aaCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATAc < 2:3584857/150‑1 (MQ=255) aaCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATAc < 2:3838719/150‑1 (MQ=255) aaCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCGGGGTGAGATAACAC‑CATTGCCTTATAc > 2:1539770/1‑150 (MQ=255) aCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACt < 1:468763/150‑1 (MQ=255) aCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACt < 1:4698187/150‑1 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTg < 2:4402852/150‑1 (MQ=255) tGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATCGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGa > 2:2649325/1‑150 (MQ=255) tGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGa < 2:2013012/150‑1 (MQ=255) ggCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGtt < 2:2137513/150‑1 (MQ=255) ggCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGtt < 1:1300561/150‑1 (MQ=255) gCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGttt < 1:635514/150‑1 (MQ=255) tCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtca < 1:3873572/150‑1 (MQ=255) gccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtcatc > 2:1368668/1‑150 (MQ=255) ccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtcatca < 2:2752909/150‑1 (MQ=255) ccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtcatca < 1:3024503/150‑1 (MQ=255) ccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtcatca < 2:380140/150‑1 (MQ=255) cgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCaa < 1:4209845/150‑1 (MQ=255) gccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCaaa < 2:4276025/150‑1 (MQ=255) aCTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAAttt < 1:672444/150‑1 (MQ=255) aCTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGTGAGATAACAC‑AAATGCCATATACTGCCCGGTTTCATACAAttt > 2:4118205/1‑150 (MQ=255) aCTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTGTGTTTAAACCCCCCACCGGGGGGAGATAAAAC‑AAAATCCATATAATGAAGGGGTTCATCAAAttt > 1:3422992/1‑150 (MQ=255) tttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTg < 2:1936207/150‑1 (MQ=255) tttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTg < 2:3671467/150‑1 (MQ=255) ttacACCTTTATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTg < 2:4559166/147‑1 (MQ=255) ttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTgg < 2:3072318/150‑1 (MQ=255) ttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCGGGGGGAGATAAAAA‑AATTGACATATACAGACGGGTTTAAAAAAAATTTgg > 2:30504/1‑150 (MQ=255) tCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTTTCTTTAACGCCCCCACCAGGGGGAGTTAAAAC‑CAATGCCTTATACATACGGGTTTAATAAAAtttttgt > 1:3909315/1‑147 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGGGTTCGTTAAACCCCCCCCCAGGGGGGGATAACAC‑AAAAGCCAGATACAGACCGGGTTCATCAAAATTTTGAgg > 1:995808/1‑150 (MQ=255) ccTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGGTTCATCAAATTTTTGTggg > 2:4134262/1‑150 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGaa < 2:4510360/150‑1 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCCCCCGGGGGAGATAACAC‑AATTGCCGTATACTTACGGGGTTAATCAAATTTTGGAGGGaa > 1:3067733/1‑150 (MQ=255) tGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCCCCAGGGTGAGATAACACAAATTGCGT‑ATAAAGACGGGTTTGATAAAAATTTGGTGGGaga > 2:3173183/1‑148 (MQ=255) gATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAAt < 1:3309789/150‑1 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATa < 2:909489/150‑1 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATa < 2:3465379/150‑1 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATa < 2:1654102/150‑1 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAg < 1:2735944/150‑1 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATc < 1:2534904/150‑1 (MQ=255) tCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCa < 1:3052660/150‑1 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCGTTAAAGCCCCCCCCAGGGTGCGATAACAC‑AATTGCCGTATAATGACGGGGTTCATAAAAATTTGGGGGGGAATAGATAAcagcag > 2:2882541/1‑150 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCCCCGGGGGGAGATAACAC‑AAATTCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAg > 2:2882486/1‑150 (MQ=255) tAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCCCCAGGGGGGGATAAAAC‑AAATGCCATATAAAGACGGGTTTCATCAAATTTTGGAGGGTAATATATAACAGCAGAc > 1:2198608/1‑150 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACa < 1:4118205/150‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAgaga < 2:1813732/150‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGGGTTGTTTAACGCCCCCACCTGGGGGAGATAACAC‑AAATGCCGTATAATGACGGGTTTCATCAAAATTTTGAGGGGAATAGATCACAGCCGACAAAgaga > 1:3381736/1‑150 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTg < 1:1549079/150‑1 (MQ=255) aaaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTTAACCCCCCACCAGGGTGGGATAAAAA‑AATATCCGTATAATGACGGGTTTAATAAAAATTTTGTGGGTAATAAATAAAAGACGACAAACATGTGGTTgg > 1:2081643/1‑150 (MQ=255) aaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGa < 1:2504575/150‑1 (MQ=255) aaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGa < 1:1017897/150‑1 (MQ=255) tCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCCCCAGGGTGAGATAACAC‑AAATGCCTTAAACAGACGGGTTTCATCAAAATTTTGAGGGAAATAGATCACTGCAGACACACAGATGGGTGGatt > 2:2216564/1‑150 (MQ=255) cccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta < 2:3854634/150‑1 (MQ=255) cccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTTTCTTTAAAGCCCCCCCCTGGGTGAGATAACAC‑AATTTCCTTATACTGACGGGTTTCATAAAATTTTGGTGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta > 2:1496595/1‑150 (MQ=255) cccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAACCCCCCCCCAGGGGGAGATAAAAC‑AAATGCCATATAATGACGGGTTTCAACAAAATTTTGAGGGGAATATATAACAGCAGACAAAGAGATGGGTGGgtta > 1:2701581/1‑150 (MQ=255) ttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTCACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCt < 2:879917/150‑1 (MQ=255) tCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGTGGGAAATATATAACAGCAGACAAAGAGATTGTTGGAGTATTGCTg > 2:1157231/1‑150 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTg < 2:4528129/150‑1 (MQ=255) gTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGa < 2:2444253/150‑1 (MQ=255) ttttttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGTTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGaa < 2:1372428/150‑1 (MQ=255) ttttttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGCGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGaa < 2:2373171/150‑1 (MQ=255) tGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGa < 1:1853938/150‑1 (MQ=255) gCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACt < 1:2649275/150‑1 (MQ=255) aTAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACttt < 1:486054/150‑1 (MQ=255) gTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTttatta < 2:2454788/150‑1 (MQ=255) ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTtattat < 1:396279/150‑1 (MQ=255) ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTtattat < 1:2769687/150‑1 (MQ=255) cGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTcatcat < 2:3221052/150‑1 (MQ=255) gTTTGTTATTTAACTCCCCCACCTGTGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt < 2:1209449/150‑1 (MQ=255) ttGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTcc < 2:736700/150‑1 (MQ=255) ttGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTcc < 1:4644030/150‑1 (MQ=255) tGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg > 1:553384/1‑150 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTc < 2:2559643/150‑1 (MQ=255) tAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa < 1:441166/150‑1 (MQ=255) tAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa < 1:1138917/150‑1 (MQ=255) aCGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATg < 1:2421201/150‑1 (MQ=255) aCGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTGTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATg < 2:2472135/150‑1 (MQ=255) gCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGTTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGa < 1:43610/150‑1 (MQ=255) gCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGa < 2:4671226/150‑1 (MQ=255) gCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGa < 2:2505862/150‑1 (MQ=255) gCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGa < 2:1303721/150‑1 (MQ=255) cccACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGtt < 1:2370095/150‑1 (MQ=255) tGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGt > 2:4189889/1‑150 (MQ=255) gggTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGtt > 1:1388151/1‑150 (MQ=255) tgagagaTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTTGAGGGAAATAGATCACTTCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTc < 1:2464444/147‑1 (MQ=255) ggTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTc < 1:4314578/150‑1 (MQ=255) tGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGt < 2:873631/150‑1 (MQ=255) aTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTa > 2:1594130/1‑150 (MQ=255) tAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTaa < 1:3702474/150‑1 (MQ=255) aaCAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAAc < 1:30484/150‑1 (MQ=255) cac‑aATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACgg < 1:2537869/150‑1 (MQ=255) cac‑aATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACgg < 1:2294019/150‑1 (MQ=255) cac‑aATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACgg < 1:165409/150‑1 (MQ=255) cac‑aATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACgg > 2:908774/1‑150 (MQ=255) c‑aATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGtt < 2:1848289/150‑1 (MQ=255) aagtGCCTTATACTGACGGGTTTCATCAAATTGTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 1:3830867/147‑1 (MQ=255) aTTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTgg < 2:3908644/150‑1 (MQ=255) aTTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTgg < 2:2927206/150‑1 (MQ=255) gCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGa < 2:642716/150‑1 (MQ=255) ccTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGat < 1:4134262/150‑1 (MQ=255) | CTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGAT > CP009273/1385861‑1386154 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |