| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,623,755 | T→G | 8.3% | L472F (TTA→TTC) | ydfI ← | putative NAD‑dependent D‑mannonate oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,623,755 | 0 | T | G | 8.3% | 687.0 / 16.5 | 240 | L472F (TTA→TTC) | ydfI | putative NAD‑dependent D‑mannonate oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (57/154); new base G (20/6); total (80/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGTAA > CP009273/1623610‑1623904 | aGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATaaa < 2:1825725/150‑1 (MQ=255) gttgttGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAg < 1:1522424/150‑1 (MQ=255) ttgttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATaaata > 2:3443507/1‑148 (MQ=255) ttgttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGa < 1:3581166/150‑1 (MQ=255) ttgttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGa < 1:3582056/150‑1 (MQ=255) ttgttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGa < 1:2313761/150‑1 (MQ=255) gttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACa < 1:2098676/150‑1 (MQ=255) gttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACa < 1:2576309/150‑1 (MQ=255) gttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACa < 1:4131154/150‑1 (MQ=255) gttgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCAAGCGCTAATAAAGACa > 2:3100755/1‑150 (MQ=255) tgAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAg < 1:170189/150‑1 (MQ=255) aaGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑a < 2:3610166/150‑1 (MQ=255) ttGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGtt < 1:720870/150‑1 (MQ=255) tgtgAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGttt < 1:882579/150‑1 (MQ=255) gtgAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTc < 2:3735107/150‑1 (MQ=255) gAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCg < 1:4740895/150‑1 (MQ=255) gagaAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCa < 2:594472/150‑1 (MQ=255) gagaAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCAAGCGCTAATAAAGAAAAGT‑ACGTTTACGTCa > 2:4659036/1‑150 (MQ=255) gaAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCAct < 2:478256/150‑1 (MQ=255) tGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGc < 1:1919208/150‑1 (MQ=255) ggCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTGGCGCCAAGCCCGAATAAAGACAACT‑ACCTTTACCTCACACGTGCa > 1:290729/1‑150 (MQ=255) gCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAg < 1:1443795/150‑1 (MQ=255) accacTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCGAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTa < 2:239074/150‑1 (MQ=255) ccacTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCCTTCGCTAATAAATAAAAAT‑AAATTTAAGTCACACTTTCAGTaa > 2:440767/1‑150 (MQ=255) acTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTaaac < 1:155065/150‑1 (MQ=255) cTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAAT‑ACGTTTCCGTCACACATGCAGTaaaca > 2:793821/1‑150 (MQ=255) tGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACCAGT‑AAGTTTCCGTCACTCTTTCCGTaaacaa > 2:4252130/1‑150 (MQ=255) ggACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTaaacaaa < 1:2908180/150‑1 (MQ=255) ggACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTaaacaaa < 1:2937176/150‑1 (MQ=255) ggACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑AAGTTTCAGTCACTCTTGCAGTaaaaaaa > 2:1800240/1‑150 (MQ=255) aCCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACt < 2:1215137/150‑1 (MQ=255) aCCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACt < 2:215614/150‑1 (MQ=255) cTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCCTGCGCGAAAAAAAACAAAA‑AACTTTACGTCACACATTCAGGAAAAAAACAAt > 1:3441403/1‑150 (MQ=255) tGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTAtt < 2:3971438/150‑1 (MQ=255) gATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTg < 2:1314541/150‑1 (MQ=255) gATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTg < 2:2447175/150‑1 (MQ=255) aTTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAAAAAAGACAATT‑ACGTTTACGTCACTCTTGCAGTAAACAAACTATTGt > 2:4755023/1‑150 (MQ=255) aTTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCGTTAGCGCCAAGCGCGAATAAATACAAGTAACGTTACC‑ACACACATGCACTaaacaaaaaaatgt > 2:4625199/1‑143 (MQ=255) ttCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTc < 1:4271811/150‑1 (MQ=255) ttCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTc < 1:3031964/150‑1 (MQ=255) ttCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCGAATAAAGACAAGT‑ACGTTTCCGTCACTCGTGCAGTAAACAAACTATTGTc > 2:3539962/1‑150 (MQ=255) ttCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCAAGCGCTAATAAAGACAAGT‑ACGTTTACGTCACTCTTGCAGTAAACAAACTAtttta > 2:3540627/1‑147 (MQ=255) ctcGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCGAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCa < 2:1223240/150‑1 (MQ=255) gCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAatc < 1:3272476/150‑1 (MQ=255) cATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAAAAAATACAAGT‑ACGTTTACGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAatca > 2:3071992/1‑150 (MQ=255) cATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCATGCGCTAATAAATAAAAGT‑AAGTTTACGTCACGCTTGCAGTAAAAAAACAATTGTCTTGCAAataa > 2:1486052/1‑148 (MQ=255) aTGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑AAGTTTAAGTCACTCTTGCAGTAAAAAAAATATTGTCTGGCAAataaa > 2:2108001/1‑147 (MQ=255) gAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCGTTAGCGCCATGCGCGAATAAAGACAAGT‑ACGGTTACGTCACTCTTGCAGTAAAAAAACTATTGTCTTGCCAAtcaaca > 2:141104/1‑150 (MQ=255) aCTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCAcc < 2:4569743/150‑1 (MQ=255) aaGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCCTTCCCAAATAAATAAAATT‑ACGTTTACGTCACACTTGCAGTAAACAAACTATTTTATGGCAAATAATCAACaaa > 2:1505513/1‑150 (MQ=255) gCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGa < 2:296090/150‑1 (MQ=255) gCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGa < 1:4667938/150‑1 (MQ=255) aaTGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTGGCGCCAAGCGCTAATAAAGAAAAGA‑AACGTTACGGAGCGCTTTCAGTAAACAAACAAAATTGTGGCAAATAAAAACCAAAAATCGccgt > 2:1260871/1‑148 (MQ=255) aaTGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCGTTGGCGCCCGGCGCGAATAAAGAACAGT‑ACGGTTCCGTCCCACGTTCAGGGAACAAACTATTGTCTGGCAAATAATAACCAAAAATCGccat > 1:2701524/1‑148 (MQ=255) aTGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTa < 1:2682006/150‑1 (MQ=255) aTGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTa < 1:311552/150‑1 (MQ=255) ccgccgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATc < 1:1283604/150‑1 (MQ=255) ccgccgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATc < 2:1606225/150‑1 (MQ=255) ccgccgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATc < 1:1149105/150‑1 (MQ=255) ccgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGcc < 1:1803736/150‑1 (MQ=255) ccgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGcc < 1:4629980/150‑1 (MQ=255) cgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCa < 2:339899/150‑1 (MQ=255) cgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCa < 2:335781/150‑1 (MQ=255) cgATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCAAGCGCTAAAAAATACAACT‑ACGTTTCCGTCACGCATGCAGTAAACCAACAAATGTATGGCAAATAATCACCAAAGATCGCCGTAATAGccc > 2:97841/1‑149 (MQ=255) ggcATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGa < 1:3221903/150‑1 (MQ=255) ggcATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGa < 1:1928011/150‑1 (MQ=255) cATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACt < 1:3824986/150‑1 (MQ=255) cATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTACGTCACTCATGCCGTTAAAAAAAAATTTTCTGGCAAATCATAACCAAAGATCGCCTTAATAGCCAGCaaatact > 2:4621769/1‑145 (MQ=255) gCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTAGCGCCCAGCGCTAAAAAATACAAAT‑AAGTTTCCGGCACAAATGCAGGAAAAAAACAAATGTATGGCCAAAAAACAACAAATATCGCCTTAATAGCCACCACAGACAGGAc > 2:206308/1‑150 (MQ=255) cTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGAcg < 2:481413/150‑1 (MQ=255) aCTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCCTGCGCTAATAAAGACAAGT‑ACGTTTCCGTCCCTCTTGCAGTAAAAAAACAAATGTTTGGCAAATCATAACCAAAGATCCCCTTAATCGCCAGCAAAGACTGGACGCGCGCtt > 2:3924159/1‑150 (MQ=255) cACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTccc < 1:406868/150‑1 (MQ=255) cACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTccc < 1:774385/150‑1 (MQ=255) cGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCtt < 2:3157725/150‑1 (MQ=255) gAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATACAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTAGTGTCTGGCAAATCATCACCAAAGATCGCCTTACTCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCg < 2:2184466/150‑1 (MQ=255) gAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCg < 2:1032937/150‑1 (MQ=255) atTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCac < 1:3521983/150‑1 (MQ=255) ttttGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCact < 1:2543080/150‑1 (MQ=255) gCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACtt < 2:1809017/150‑1 (MQ=255) cACGGTCGCTTTCGCGCCATGCGCGAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTg < 2:4263920/150‑1 (MQ=255) cACGGTCGCTTTCGCGCCATGCGCGAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTg < 2:1881742/150‑1 (MQ=255) cGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGc > 2:3694023/1‑150 (MQ=255) cGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGc > 2:752811/1‑150 (MQ=255) cGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGc > 2:1110121/1‑150 (MQ=255) cGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCATTCGGCACTACTTTGTACAGc > 1:2463467/1‑150 (MQ=255) gCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGcc > 2:4161562/1‑150 (MQ=255) tttCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCtt < 2:3592756/150‑1 (MQ=255) tttCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCtt < 2:2410491/150‑1 (MQ=255) cgcgCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTg < 1:353389/150‑1 (MQ=255) cgcCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGaa < 2:3841797/150‑1 (MQ=255) gcCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAAt < 1:2082345/150‑1 (MQ=255) ccATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATa > 1:3782963/1‑150 (MQ=255) cATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATaa > 2:1152872/1‑150 (MQ=255) cATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATaa > 2:1152738/1‑150 (MQ=255) cATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATaa < 1:793821/150‑1 (MQ=255) gcTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGt < 1:518944/150‑1 (MQ=255) cTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGTa < 1:3100755/150‑1 (MQ=255) cTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGTa < 1:4411379/150‑1 (MQ=255) cTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGTa < 2:2351649/150‑1 (MQ=255) taataaAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGTaa > 2:1876464/1‑150 (MQ=255) | GTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCGCCATGCGCTAATAAAGACAAGT‑ACGTTTCCGTCACTCTTGCAGTAAACAAACTATTGTCTGGCAAATCATCACCAAAGATCGCCTTAATCGCCAGCAATGACTGGACGCGCGCTTTCCCTTCGGCACTACTTTGTACAGCCTTCTGAATAACAGGTAA > CP009273/1623610‑1623904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |