| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,670,108 | A→C | 5.8% | V170V (GTT→GTG) | pntB ← | pyridine nucleotide transhydrogenase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,670,108 | 0 | A | C | 5.8% | 634.6 / 4.9 | 246 | V170V (GTT→GTG) | pntB | pyridine nucleotide transhydrogenase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (135/89); new base C (3/19); total (138/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.45e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 266 total aligned reads displayed.
ATCGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTG > CP009273/1669959‑1670257 | cGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAAc < 2:278991/150‑1 (MQ=255) tacacAACAACTGGCATATCTCCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCAGACCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACg > 2:2383543/2‑150 (MQ=255) caccaccacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGAc < 2:204108/150‑1 (MQ=255) caccacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCag > 1:1012357/1‑150 (MQ=255) caccacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCag > 2:518136/1‑150 (MQ=255) caccacTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCag > 1:721210/1‑150 (MQ=255) cTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAgccg > 2:1813778/1‑150 (MQ=255) atatCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAgg > 2:4634137/1‑150 (MQ=255) atCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATCCCCGCGAAAGTGGGTTCATTATCAGCAATGCCAGAAGTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCCGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGtt < 2:3318029/150‑1 (MQ=255) atCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCCGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCCGCAGCAGTAAGTAAACGACCAGAGCCGCCAGGtt < 2:2568763/150‑1 (MQ=255) atCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGtt > 1:182459/1‑150 (MQ=255) cTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCa > 2:1363011/1‑150 (MQ=255) tGCACCACCGTTGGTGGCTAATAAATGCCACCCTAATACCAGCGAATTTGCGTTATTTATCAGCAATGCCAGCAATTGCAGGCCGACGCTGTCCGTGCTAACAAATAAAATCACCACCAGGAAGGAAACGACCAGAGCCGCCAGGTTCAt < 1:2700047/150‑1 (MQ=255) accaccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCAtttt > 2:1636846/1‑150 (MQ=255) caccGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTtgt > 2:2186539/1‑150 (MQ=255) ccGATGTAGGCGAATAAATGCCTGCCGAATACACGCGCAATTGCGTTCATAATAAGCATTGCCAGAACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGa < 2:323863/150‑1 (MQ=255) gATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACg > 1:2653846/1‑150 (MQ=255) aTGGAGGCGACTAAATGCCAGCCGAATACGAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATGTTGTGACgg > 2:3995487/1‑150 (MQ=255) aTGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACgg > 2:4750040/1‑150 (MQ=255) gAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGttt > 2:3457728/1‑150 (MQ=255) aGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTg > 2:326583/1‑150 (MQ=255) ggCGACTAAAGGCCAGCCGAATCCCCGCGCACTTGGGGTCTTTATCCGCACGGCCAGCACTTGCCGGCCGCCGCGGTCCGTGCGAACAAATACAAGCAGCCGCAGGACGCACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTgg < 1:3024072/150‑1 (MQ=255) cGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGgca > 1:1946516/1‑150 (MQ=255) aTGCCCGCCGAATACCCGCGCATTGGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCCGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCaa < 1:375066/150‑1 (MQ=255) aGCCTAATACCAGCGCAATTGCGGTAATTATCAGCATTGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAAAAAATACAATCCGCAGCAGTAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGtt < 1:4350879/150‑1 (MQ=255) cctaaTACCAGCGCATTTGCGGTAATTATCCGCACTGCCAGCACTTGCCGGCCGACGCTGTCCGTGCGAAAAAATACAATCAGCAGCAGGAAGCAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTa < 2:2001959/147‑1 (MQ=255) ccGAATCCCAGCGCAATTGCGGACATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTa < 2:790523/150‑1 (MQ=255) cGAATCCCCGCGCAATTGCGGTAATTATCCGCAATGCCAGCACTTGCTGGCCGACGCTGTCGGTGCTAACAAATACAATCAGCAGCAGGAAGTAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAg < 2:2873564/150‑1 (MQ=255) cGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAg > 2:3950372/1‑150 (MQ=255) aagaCCAGCGCAATGGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACACTCAGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGAc < 2:4726356/147‑1 (MQ=255) ctccccgcgcAATTGCGGTCTTTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACACTCCGCCGCCGGACGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACg < 2:2210618/144‑1 (MQ=255) tACCAGCGCATTTGCGGTCATTATCCGCAATGCCAGCACGTGCTGGCCGACGCTGTCGGTGCGAAAAAATAAAATCACCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGa < 1:4592140/150‑1 (MQ=255) tACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGa > 1:559744/1‑150 (MQ=255) aCCCGCGCATTTGCGGTCATTATCAGCACTGCCAGCACTTGCAGGCCGACGCTGTCCGTGCTAACAAATACAATCAGAAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGaa < 2:4143026/150‑1 (MQ=255) cAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAAt > 1:2432148/1‑150 (MQ=255) aGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATc > 1:3991491/1‑150 (MQ=255) aGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATc > 1:4143077/1‑150 (MQ=255) cAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGc > 2:104756/1‑150 (MQ=255) aTTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCca > 2:2091563/1‑150 (MQ=255) ggggTCATTAACACCAAGCCCAGCACTTGCCGGCCGCCGCTGTCCGTGCAAACAAATACACCCCGCTGCTGTACGTACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCcacac < 1:1185997/148‑1 (MQ=255) gTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGt > 2:2017113/1‑150 (MQ=255) gTCATTATCAGAAATGCCTGAACTTGCAGGCCGACGCTGTCCTTGCGAACAAATACAATCAGCAGCAGGATGTAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGt < 2:254083/150‑1 (MQ=255) tCATTATCAGCAATGCCAGCACTGGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGtt < 2:3857079/150‑1 (MQ=255) cATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGttt > 2:3833259/1‑150 (MQ=255) aTTATCCGAAATGCCAGCACTTGCTGGCCGACGCTGTCCGTGCTAAAAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTg < 1:738087/150‑1 (MQ=255) tATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGcc > 1:1522349/1‑150 (MQ=255) cgCAATGCCAGCACTTGCTGGCCGAGGGTGTCCGTGCGAAAAAATACAATCCGCAGCTGTAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAAc < 1:4634137/149‑1 (MQ=255) cAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGc > 2:3742041/1‑150 (MQ=255) cAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGc > 2:3921746/1‑150 (MQ=255) ccAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGccacca > 2:4571507/1‑150 (MQ=255) ccAGCACTGGCAGGCCGACGCTGTCCGTGCGAAAAAATACAAGCAGCAGAAGGACGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGccacca < 1:3463901/150‑1 (MQ=255) cAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCcaccac > 2:533171/1‑150 (MQ=255) cAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCcaccac > 1:76595/1‑150 (MQ=255) aGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCaccacc > 2:124050/1‑150 (MQ=255) aGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCaccacc > 1:483019/1‑150 (MQ=255) cACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGa > 1:326819/1‑150 (MQ=255) cTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAc < 2:4334042/150‑1 (MQ=255) cTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAc > 1:1706287/1‑150 (MQ=255) tGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAccc > 2:1436585/1‑150 (MQ=255) cAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGt > 1:2530290/1‑150 (MQ=255) cAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGt > 1:1137844/1‑150 (MQ=255) gCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGaa > 2:2326276/1‑150 (MQ=255) gCCGACGCTGTCCGTGCGAAAAAATACAATCAGCAGCAGGATGTAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGaa < 2:402369/150‑1 (MQ=255) ccGACGCTGTCCGTGCTAAAAAATACAATCCGCAGCTGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAAc < 1:3833305/150‑1 (MQ=255) ccGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAAc > 2:2722691/1‑150 (MQ=255) gACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGt > 1:3075416/1‑150 (MQ=255) cGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTa > 1:4510489/1‑150 (MQ=255) gCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAc > 1:2579530/1‑150 (MQ=255) gtggccGTGCTAAAAAATACAATCCCCAGCCGGACGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAcc < 1:1641685/146‑1 (MQ=255) cTGTCCTTGCTAAAAAAAACAACCAGCAGCAGGAAGTACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAcc < 1:2911242/150‑1 (MQ=255) cGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGcccc > 2:4409048/1‑150 (MQ=255) gctaaaaaaTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGAt < 1:4685341/144‑1 (MQ=255) gCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGAt > 1:1905298/1‑150 (MQ=255) cGAACACAGACACGCCGCAGCAGGACGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATg < 2:2956934/150‑1 (MQ=255) taaaaaaTACAACCAGCAGCAGTAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGa < 1:518136/146‑1 (MQ=255) gAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGa < 2:1013090/150‑1 (MQ=255) aaCAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGaa > 1:2138024/1‑150 (MQ=255) aaCAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGaa < 2:4515326/150‑1 (MQ=255) aaCAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGaa > 1:69908/1‑150 (MQ=255) aaCAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGaa > 1:1191535/1‑150 (MQ=255) aaaTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGAt > 2:3454257/1‑150 (MQ=255) aCAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg > 2:4523054/1‑150 (MQ=255) aCAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg < 1:685443/150‑1 (MQ=255) cAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGa < 2:656541/150‑1 (MQ=255) cAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGa < 2:1154505/150‑1 (MQ=255) aaTCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAg > 2:885462/1‑150 (MQ=255) aTCAGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAgg < 1:3334454/150‑1 (MQ=255) tCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGa > 1:2319657/1‑150 (MQ=255) ccgctggaaggacACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAacac < 1:4101636/145‑1 (MQ=255) cagcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCACTGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGCAGATACCGAGGAacac > 2:1588523/1‑150 (MQ=255) agcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt > 1:3498346/1‑150 (MQ=255) agcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt > 1:990201/1‑150 (MQ=255) cagGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc < 1:1363011/150‑1 (MQ=255) tgtatgcaaaCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 1:2382862/143‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 2:3138624/150‑1 (MQ=255) taagtaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGt < 1:1067233/149‑1 (MQ=255) gaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGt < 2:1473052/150‑1 (MQ=255) aggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCa < 1:3950372/150‑1 (MQ=255) aggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCa > 2:932670/1‑150 (MQ=255) ggacACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAg < 1:3402398/150‑1 (MQ=255) | ATCGACACCACCACTGGCATATCTGCACCACCGATGGAGGCGACTAAATGCCAGCCGAATACCAGCGCAATTGCGGTCATTATCAGCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTG > CP009273/1669959‑1670257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |