| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,859,009 | T→G | 8.3% | intergenic (+18/+30) | yeaD → / ← yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,859,009 | 0 | T | G | 8.3% | 387.5 / 5.7 | 165 | intergenic (+18/+30) | yeaD/yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (77/69); new base G (2/17); total (79/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.40e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 173 total aligned reads displayed.
ATGGGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCAAT > CP009273/1858860‑1859158 | aTGGGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTtgtgt < 1:3549920/150‑1 (MQ=255) tGGGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTtgtgtg > 1:1816242/1‑150 (MQ=255) cGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCgg < 1:2190814/150‑1 (MQ=255) atatGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAACGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGt < 1:3736915/150‑1 (MQ=255) atGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGc < 1:1582101/150‑1 (MQ=255) tGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCa < 2:4162784/150‑1 (MQ=255) ccGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAAt < 1:2104398/150‑1 (MQ=255) cGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAAtt > 1:1144509/1‑149 (MQ=255) gatgatGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑a > 2:995352/1‑150 (MQ=255) gatgatGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑a < 1:2275389/150‑1 (MQ=255) atgatgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑At < 2:2258728/150‑1 (MQ=255) tgatgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATc > 2:3434543/1‑150 (MQ=255) tgatgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATc > 2:3434988/1‑150 (MQ=255) ggCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGc < 1:4677116/150‑1 (MQ=255) cTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCCATGC‑ATCCGGcac > 2:2788892/1‑150 (MQ=255) cTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGcac > 2:13008/1‑150 (MQ=255) cTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGGGCAATTC‑ATCCCGcac > 1:1999897/1‑150 (MQ=255) tACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGcaca < 2:1219268/150‑1 (MQ=255) tACAAAACATTTGTTTGTGTAGAAACGGCGTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGcaca < 2:1219315/150‑1 (MQ=255) cAAAACATTGGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGcacaca < 1:3494642/150‑1 (MQ=255) aaaaCATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATACCGCACacaa > 1:4182688/1‑150 (MQ=255) aaCATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACacaaca > 1:568629/1‑150 (MQ=255) cATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATc > 2:4647661/1‑150 (MQ=255) tgtttgtGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATTC‑ATCCGGCACACAACAacacac > 1:1937708/1‑150 (MQ=255) tgtttgtGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCacac > 1:4321303/1‑150 (MQ=255) ttgtGTATAAACGGCTTACGCTTCAGAAACGAAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTGGCGTTGCGAAAGGTTAATTTACGTTAATGTTGTGTGCGGGGTGCAATGC‑ATCGGGCACACAACATCACACCat < 2:4176908/150‑1 (MQ=255) tgtgTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCCATGC‑ATCCGGCCCACCACATCACACCaga > 2:2465136/1‑148 (MQ=255) tgtAGAAACGGCTTACGCTTCAGAAACCAAAAAAGTCACCAACGACAAACCTCCACATCTGGCCCAATCAATTCGCTTTGCTAAACTTTAATTTACGTTAATGTTGTGTGCCGGGTGCAAGGC‑ATCCGCCACACAACATCACACCATATc < 2:4030170/150‑1 (MQ=255) aGAAACGGCTACCGCTTCCGAACCGCAAAAAGTCACCAAACAGAACCCTGCACATCGGGCGCAAGCCATTCGCGTTGCGAAACGTTACTTTACGTTACTGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAg < 2:4191897/150‑1 (MQ=255) gAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATTC‑ATCCGGCACACAACATCACACCaaataccgc > 1:1483638/1‑145 (MQ=255) gAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCAgc > 1:1483602/1‑150 (MQ=255) aaaCGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGGGGCATGC‑ATACGGCCCACCACATCACACCAAATACAgcg > 1:4042359/1‑150 (MQ=255) gCTTACGCTACATAAACGCAAAAAGTGACAAAATATAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCTAAACTTTAATTAACGTTAATGTTGTGTGCCGGGTGCAATGA‑ATCCGGAACACAACATCACACCATATCCAGCGCAGtt < 2:976834/150‑1 (MQ=255) aCGCTCCAGAAACCCAAACAGCCCCCACAGACAACCCTGCAACTCGGCCGCAACCCTTTCGGGTGGCGACCGGTTATTTTACTTTATTGTTGTTGGCGGGGTGCAATGC‑AGCGGGCACACAACATCACACCATATCCAGCGCAGTTTTTc < 2:3645673/150‑1 (MQ=255) taaGAAACGCAAAACGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGAAATGC‑ACCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCtttt < 2:612517/148‑1 (MQ=255) tCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGGGCAATGC‑AACCGGCACCCAACATCACACCCAATACACCGCAGttttttcggtt > 1:4031098/1‑144 (MQ=255) tCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCtttt < 2:3487026/150‑1 (MQ=255) cGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAAAATCACACCAAATACAGCGCAGTTTTTACTTTTGGTGCCg > 1:2253338/1‑150 (MQ=255) aaaGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGatat > 2:2204890/1‑150 (MQ=255) aaGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCGGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATg < 2:1043805/150‑1 (MQ=255) aGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGc > 2:1827594/1‑150 (MQ=255) gTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGcc > 2:385421/1‑150 (MQ=255) tGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCCCACACCATCACACCCAATCCAGCGCAGGTTTTCCGTTTGGTGCCGGGTATGccg > 1:3360496/1‑149 (MQ=255) gACCAAAGAGAAACGTGCACATCTGGCGCACGCCATTCGCGTTGCGAAAGGTTAATTTACGTTATTGTTGTGTGCCGGGTGCACTGC‑AGCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCtt < 2:1720077/150‑1 (MQ=255) gACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCtt > 2:2598516/1‑150 (MQ=255) ccAAAGATAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGAAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTAt < 2:1150772/150‑1 (MQ=255) cAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACCTCACACCAAATCCACCGCAGTTTTTCCGTTTGGTGCCGGATATGCCATATc > 1:1103605/1‑150 (MQ=255) aaaGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGTGCCAATC‑ATACGGCCCACAAAAACACAACAAAACAAGCGCACGTTTTGAGTTTGGTGGCGGATATTCCGTAtac > 1:1182910/1‑148 (MQ=255) aaGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCAGCGCAGTTTTTCCGTTTGGTGCCGGATATGCCTTATCCa > 1:3439490/1‑150 (MQ=255) gagaAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATTC‑ATCCGGCACACAACAACACACCAAATCCCGCGCAGTTTTTGCTTTTGGTGGCGGATAAGCCGTATCCaac > 1:3799015/1‑148 (MQ=255) agaACCCTGCACATCGGGCGCAATCCATGGGGGTTGCGAAACGTTAATTTACGTTATTGTTGTGGGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCa < 2:3625036/150‑1 (MQ=255) agaAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTGATACAGCa > 2:2271168/1‑150 (MQ=255) taaaCCTGCACATCTGGCGCAATCCATGCGCTTTGCGAAACTTTAATTTACGTTATTGTTGTGGGCCGGTTGCAATGC‑ACCCGCCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCAt < 1:3093832/149‑1 (MQ=255) gaACCCTCCACAGCTGGCGAAATCCATTCGCGTTGCGAAACTTTAATTTACGTTAATGTTGTGTGCCGGGTGCAAGGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCAt < 1:3094457/150‑1 (MQ=255) aaCCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGTGCAATGC‑ATACGGCCCACAAAAAAACACCAAATACACCGCACTTTTTTCTTTTTGTGGGGGGTATGCCGTATCAAGCAAAg > 1:431028/1‑150 (MQ=255) aaCCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCAGCGCAGTTTTTCCGTTTGGTGCCGGATATGCCTTATACAGCATAg > 1:333015/1‑150 (MQ=255) aaCCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAAAGC‑ATACGGCCCACAACCACACACCAAATACAGCGCCGTTTTTGATTTTGGGGGCGGTTATTCCGTATACaccctat > 1:519209/1‑144 (MQ=255) aaCCTGCACATCGGGCGCAAGCCATTCGCGTTGCGAAACTTTAATTTACGTTAATGTTGTGGGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAg < 2:2965139/150‑1 (MQ=255) cTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGGGCACTGC‑ATCCGGCCCACAACCGCACCCCCAATCCCCCGCAGTGTTGCCGTGGGGTGCCGGAGAGGCCGGATCCCGCCAAGCTa > 2:54655/1‑150 (MQ=255) gCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAAt < 2:253751/150‑1 (MQ=255) gCACATCTGGCGCAATCAATTCGCTTTGCGAAACTTTAATTTACTTTATTGTTGTGTGCCGGGTGAAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAAt < 1:746801/150‑1 (MQ=255) cacaTCTGGCGCAATCCATTCGGGTGGCGAAACTTTATTTTACGTTATTGTTGTGTGCGGGGTGCAAGGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAAtt < 1:4746321/150‑1 (MQ=255) cacaTCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACCACATCACACCAAAACCCGCGCAGTTTTTCCGTTTGGTGCCGGATATGCCATATCCAGCATAGCTaaat > 1:2273310/1‑148 (MQ=255) acaTCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATTC‑ATCCGGCACACAACAACACACCAAATCCAGCGCAGTTTTTCCGTTTGGTGCCCGCTATTCCTTATCCACCATAGCTAATTc > 1:763093/1‑150 (MQ=255) acaTCGGGCGAAATCATTTGGGGTTGCTAAACTTTATTTTAGTTTATTGTT‑TGGGGCGGGTTGAATTCAACCCGCCCCACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTc < 1:2140450/150‑1 (MQ=255) aTCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGTGCAATTC‑ATCCGGCACACAACATCACACCCAAAGCAGCGCCGTTTTTGGTTTTGGTTGCGGATATGGCTTTTAAAGCAAAGCTaaataca > 1:3367531/1‑145 (MQ=255) cgcAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaag < 2:2637031/150‑1 (MQ=255) cgcAATCCATGGGGGTTGCGAAAGGTTATTTTACTTTATTGTTGTGTGCGGGGGGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaag < 1:2626042/150‑1 (MQ=255) gcAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAAAGC‑ATCCGGCACACAACATAACACCAAATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATTCCGTATCCAGCCTAGCTAATTCCGATgaata > 2:4404908/1‑148 (MQ=255) aaTCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCCTAGCTAATTCCGCTGAAGaaa > 2:2622642/1‑150 (MQ=255) tCCATTCGCGTGGCGAACCGGTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGt < 2:1532923/150‑1 (MQ=255) ccATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGtt < 2:603121/150‑1 (MQ=255) atttCGGGTTGCCAAACTTTATTTTACGTTATTGTTGTGTGCCGGGTGAATTGC‑ACCCGCCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTc < 1:356064/148‑1 (MQ=255) tCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGAc > 2:3557077/1‑150 (MQ=255) cgTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTc < 2:641216/150‑1 (MQ=255) cgTGGCGAAACGTTATTTTACGTTATTGTTGTGTGCCGGGGGCATGGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTc < 2:928862/150‑1 (MQ=255) tggctaaaCGTAATTTTCTGTTAATGTTGGGGGCGGGGTCCAATGC‑AGCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCaa < 1:2476814/145‑1 (MQ=255) tGCGAAACGTTAATTTACGTTAATGTTGTGGGCCGGGTGAAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAg < 2:4182992/150‑1 (MQ=255) gAAACGTTAATTTACGTTATTGTTGTGGGCCGGGTGCAAGGC‑AGCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGcac < 2:4494072/150‑1 (MQ=255) aaaCGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTACTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGcaca > 2:3097832/1‑150 (MQ=255) aaaCGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCCGCGCAGTTTTTCCTTTTGGTGCCGGATATTCCTTATACAGCATAGCTAATTCCCCAGAAGAAATTTCGACCTAAAGcaca > 2:892710/1‑150 (MQ=255) aaCTTTATTTTACGTTATTGTTGTGTGCGGGTTTAAATGC‑ATCCGCCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAg < 1:2085705/150‑1 (MQ=255) cGTTAATTTACGTTATTGTTGTGTGCGGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGcc < 2:4196039/150‑1 (MQ=255) cGTTAATTTACGTTAATTTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGcc < 2:1811377/150‑1 (MQ=255) aaTTTACTTTAATTTTGTGGGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCAt < 2:2001507/150‑1 (MQ=255) aaTTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCAGCGCCGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCAt > 2:1373743/1‑150 (MQ=255) aTTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCCCACAACATCACACCATAACCAGCGCAGTTTTTCCGTTTGGTGCCGGATATGCCTTATCCAGCCTAGCGAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCAtt > 2:1855637/1‑150 (MQ=255) aTTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCAAATCCAGCGCAGTTTTTACGTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCAtt > 2:525291/1‑150 (MQ=255) aTTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACAAAACACCATATCCAGCGCAGTTTTTACTGTTGGTGCCGGATATTCCGTATCCAGCAAAGCTAATTACGCTGAAGAAAGTTCGACCACAATCACACCCGCAtt > 2:526278/1‑150 (MQ=255) ttcggTTATTGTGGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCAtttt < 2:3234976/146‑1 (MQ=255) tACGTTAATGTTGTGTGCCGGGGGCAATGC‑GTCCGGCACACCACATCACACCCTAGCCCGCGCAGGGGTGCCGTGGGGTGCCGGATATGCCGGAGCCAGCCTCGCGACTTCCGCAGAAGGAAGGGCGGCCGCAAGCACCGCCGCAGTttg > 2:4334355/1‑150 (MQ=255) cGTTAATGTTGTGTGCCCCGTGCCAAGC‑ATCCCGCCCACAACAACACACCAAATCCACCCCAGTTTTTCCGTGTGGTGCCGGATATGCCTTATCCACCAAAGCGAAATCCGCTGACCTAAGTTCGACCTCAAGCACACCCGCCATttgtt > 2:4117802/1‑150 (MQ=255) tattgttgtGTGCCGGGTGCAAGGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGa < 2:3360496/147‑1 (MQ=255) attgttgtGTGCGGGGTGCAATGC‑AGCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGAc < 2:2013691/148‑1 (MQ=255) ttgttgtGTGCCGGGTGCAAGGC‑ACCCGCCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACa < 1:4592738/149‑1 (MQ=255) aTGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGAcc > 2:274915/1‑149 (MQ=255) aTGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACAACACACCAAATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCCGCATAGCTAATTCCGCTGAAGAAAGTTAGACCTCAAGCACAGCCGCCATTTGTTGGACa > 2:707638/1‑150 (MQ=255) ttgtGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATgg < 2:2886647/150‑1 (MQ=255) tgtgCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCa > 1:4082874/1‑150 (MQ=255) tgCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCAAt < 2:452932/150‑1 (MQ=255) | ATGGGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGCAATGC‑ATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCAAT > CP009273/1858860‑1859158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |