| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,100,755 | C→T | 6.1% | V352V (GTG→GTA) | glf ← | UDP‑galactopyranose mutase, FAD/NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,100,755 | 0 | C | T | 6.1% | 404.8 / 10.8 | 115 | V352V (GTG→GTA) | glf | UDP‑galactopyranose mutase, FAD/NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base C (61/47); new base T (2/5); total (63/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
AAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACTT > CP009273/2100607‑2100900 | aaGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCa < 1:1061223/150‑1 (MQ=255)aaGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCa < 1:1061180/150‑1 (MQ=255) aGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCAc > 1:4455334/1‑150 (MQ=255) gatgatATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACt < 1:4681577/150‑1 (MQ=255) gatgatATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACt < 1:4681116/150‑1 (MQ=255) tgatATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTg < 1:2230911/150‑1 (MQ=255) gatATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGa > 2:2524522/1‑150 (MQ=255) atatTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGAt > 1:1333979/1‑150 (MQ=255) tatTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATg < 1:108963/150‑1 (MQ=255) atTAACGCATACGGCTTGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGc < 1:2487828/150‑1 (MQ=255) tAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCat > 2:812375/1‑150 (MQ=255) tAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCat > 2:563295/1‑150 (MQ=255) tAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCat > 2:563250/1‑150 (MQ=255) gCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATAATTAATCCGTACGCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCa > 2:454822/1‑150 (MQ=255) cATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCat > 1:2176440/1‑150 (MQ=255) cATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCat < 2:3658327/150‑1 (MQ=255) aTACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCata < 2:3705108/150‑1 (MQ=255) aTACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCata > 2:3917320/1‑150 (MQ=255) aTACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCata > 2:4356232/1‑150 (MQ=255) tACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCataa > 1:1101013/1‑150 (MQ=255) ggCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAatat < 1:941638/150‑1 (MQ=255) ggATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTtat > 1:15039/1‑150 (MQ=255) aaaTATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCg > 2:609595/1‑150 (MQ=255) aaTATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCgg < 2:3365600/150‑1 (MQ=255) aaTATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCgg < 2:3365699/150‑1 (MQ=255) atatatCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGc > 1:4477804/1‑150 (MQ=255) tatCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCaa > 1:41009/1‑150 (MQ=255) tatCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCaa > 2:4705789/1‑150 (MQ=255) tCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAAc > 2:48677/1‑150 (MQ=255) ccTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAAcg > 2:2050537/1‑150 (MQ=255) cttcttAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAAcgc > 1:1242261/1‑150 (MQ=255) taAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAAtata > 1:417680/1‑150 (MQ=255) aaaCAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATaa < 1:1337276/150‑1 (MQ=255) aaCAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAAGATAAc > 1:4435098/1‑150 (MQ=255) aGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCtt > 1:1592464/1‑150 (MQ=255) aaaTGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGtct > 2:461825/1‑150 (MQ=255) aaTGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTAAATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATATATACTCGGCCAAACTCCCGCCCAATATAACCTTGtctt > 2:4089951/1‑150 (MQ=255) gCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTtctc < 1:2608321/150‑1 (MQ=255) gTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgc > 1:1080150/1‑150 (MQ=255) tAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgct < 1:4280176/150‑1 (MQ=255) tGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctagc > 2:4180009/1‑150 (MQ=255) gagaAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctagct > 1:19505/1‑150 (MQ=255) agaAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTgctagcta > 2:291744/1‑150 (MQ=255) aaaGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAAc < 1:2673859/150‑1 (MQ=255) aaGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAAct < 2:1333979/150‑1 (MQ=255) aGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActc > 1:2414006/1‑150 (MQ=255) aGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActc > 1:782370/1‑150 (MQ=255) gACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActct > 2:554426/1‑150 (MQ=255) gACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActct < 2:3338052/150‑1 (MQ=255) acacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctc > 2:4669299/1‑150 (MQ=255) cacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctct < 2:1048964/150‑1 (MQ=255) cacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctct < 2:124850/150‑1 (MQ=255) cacTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAActctct < 1:4356232/150‑1 (MQ=255) cTAATTACAAGATAGATCTTTAATCCGTACTCATTTTTTTTTTCACTTGTTAAAGAGCGGCAGATATCACTTGATGCATATCTTATTATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCtat < 1:2852880/150‑1 (MQ=255) cTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCtat < 1:2852877/150‑1 (MQ=255) cTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCtat < 2:2286773/150‑1 (MQ=255) tAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCtata < 2:3630039/150‑1 (MQ=255) tAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCtata > 1:2019997/1‑150 (MQ=255) tAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCATGTCTTCTCTGCTAGCTAACTCTCtata > 1:2022335/1‑150 (MQ=255) ttACAAGATATATAATTAATCCGTACTAATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATAttt < 1:3814103/150‑1 (MQ=255) tACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTc > 2:1732645/1‑150 (MQ=255) tagatagatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTa < 2:4275693/149‑1 (MQ=255) aaGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTa > 2:4535860/1‑150 (MQ=255) aaGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTa > 1:1267093/1‑150 (MQ=255) aaGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTa < 2:4275671/150‑1 (MQ=255) gatagatCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTaaa > 2:3185934/1‑150 (MQ=255) tCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTc < 2:1242261/150‑1 (MQ=255) aaTCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGt > 1:2579275/1‑150 (MQ=255) aaTCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGt < 1:2370268/150‑1 (MQ=255) aTCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGtt > 1:4569167/1‑150 (MQ=255) aTCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGtt < 1:342841/150‑1 (MQ=255) tCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGttt > 2:2163961/1‑150 (MQ=255) tCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGttt > 1:2415169/1‑150 (MQ=255) tCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGttt > 1:37611/1‑150 (MQ=255) ccGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGtttt < 1:1464652/150‑1 (MQ=255) gTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTtta < 1:2767757/150‑1 (MQ=255) gTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTAGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTtta > 2:4231068/1‑150 (MQ=255) aCTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTttatt < 1:3018701/150‑1 (MQ=255) tCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTtattat > 1:137153/1‑150 (MQ=255) cATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATc > 2:4503746/1‑150 (MQ=255) cATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATc > 2:4503778/1‑150 (MQ=255) aTTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCa > 2:2271976/1‑150 (MQ=255) aTTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCa > 2:1103031/1‑150 (MQ=255) aTTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTATTAAAAAGCTCAATGTTTTtattataa > 2:3491547/1‑148 (MQ=255) tataTTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCAtt > 2:4746312/1‑150 (MQ=255) atTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAAc < 1:3917320/150‑1 (MQ=255) tttttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACt > 1:857526/1‑150 (MQ=255) tttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTgg < 1:270509/150‑1 (MQ=255) tttCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTgg < 2:2176440/150‑1 (MQ=255) tCACTTGATAAAGAGCGGCAGATATTACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGAt > 1:3334920/1‑150 (MQ=255) cTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGAtagt < 1:1103031/150‑1 (MQ=255) cTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGAtagt > 2:4069652/1‑150 (MQ=255) agagCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcg < 2:4541471/150‑1 (MQ=255) agCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcgtc > 1:4554295/1‑150 (MQ=255) agCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTtcgtc > 1:4074907/1‑150 (MQ=255) cAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCaa > 2:2241237/1‑150 (MQ=255) gATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACt < 2:1268690/150‑1 (MQ=255) gATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACt < 1:87661/150‑1 (MQ=255) gATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACt < 1:3148530/150‑1 (MQ=255) atatCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACtt < 1:4686386/150‑1 (MQ=255) | AAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATAAATGCTGTAATGAGAAAGACACTAATTACAAGATAGATCATTAATCCGTACTCATTATATTTTTCACTTGATAAAGAGCGGCAGATATCACTTGATGCATATCATAATATTTATACTCGGCCAAACGCCCGCCAAATATAACCTTGTCTTCTCTGCTAGCTAACTCTCTATATTTCTTAAAAAGCTCCATGTTTTTATTATCATTAACTGGATAGTAGGGTTCGTCGCCAACTT > CP009273/2100607‑2100900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |