| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,124,159 | C→A | 12.0% | A67A (GCG→GCT) | wcaD ← | putative colanic acid polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,124,159 | 0 | C | A | 12.0% | 741.1 / 61.2 | 217 | A67A (GCG→GCT) | wcaD | putative colanic acid polymerase |
| Reads supporting (aligned to +/- strand): ref base C (125/66); new base A (16/10); total (141/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
AAACGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAACCAGCAG > CP009273/2124010‑2124308 | aaaCGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAc < 1:2659520/150‑1 (MQ=255)aaaCGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAc < 1:963225/150‑1 (MQ=255)aaaCGTAATATCTTGCGATGGTTGTGTGGCGAAATTGATTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAc < 1:3229075/150‑1 (MQ=255) aCGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGc > 2:4516594/1‑150 (MQ=255) ttAATATATTGCGATGGTTGTGTGGCTAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCg < 1:630311/149‑1 (MQ=255) gTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCg > 2:447695/1‑150 (MQ=255) tAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGt > 2:4351181/1‑150 (MQ=255) tAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGt > 2:2154421/1‑150 (MQ=255) tatCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAg > 2:1211628/1‑150 (MQ=255) cTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTcc > 1:1902683/1‑150 (MQ=255) aTGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGcc > 2:4325807/1‑150 (MQ=255) gTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAAt > 1:1479498/1‑150 (MQ=255) tgtgtgGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATcc > 2:1934414/1‑150 (MQ=255) tgtgGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAGTATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCt < 2:4288587/150‑1 (MQ=255) tgtgGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCt > 1:2060539/1‑150 (MQ=255) tgtgGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCt < 2:1830099/150‑1 (MQ=255) tgGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTaa < 1:3261464/150‑1 (MQ=255) tgGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTaa < 1:3382274/150‑1 (MQ=255) ggCGAAATTTTTTTAAAACGAATACTCCACACCATGCAAATAATGATCAAAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAg < 2:4510912/150‑1 (MQ=255) ggCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAg < 2:649407/150‑1 (MQ=255) gAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCa < 2:160035/150‑1 (MQ=255) aaaTTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCaa < 2:2763425/150‑1 (MQ=255) aaaTTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCaa > 1:57451/1‑150 (MQ=255) aaaTTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCaa > 2:3943929/1‑150 (MQ=255) aTTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAatc > 2:4558998/1‑150 (MQ=255) tGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAatcat < 1:961427/150‑1 (MQ=255) gTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAatcatc > 1:3830277/1‑150 (MQ=255) ttttAAAACGAATACTCCACACCATGCAAATAATGATCACAATATAGACAAACAGCATAGTTGATGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAAtcatca < 1:89124/150‑1 (MQ=255) ttAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑t < 1:357737/150‑1 (MQ=255) ttAAAACGAATACGCCACACCATGACAATAATTATCAAAATATACACAAACAGATTTTTTGATGTGACTTTTTTACGGGCATCCAGCGACTGACCAAACAGATTTTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑t < 1:12693/150‑1 (MQ=255) tAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑tt > 1:915666/1‑150 (MQ=255) aaaaCGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑ttt > 1:3946184/1‑150 (MQ=255) aaaCGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑tttt > 2:3873068/1‑150 (MQ=255) aCGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑tttttt > 1:1070470/1‑150 (MQ=255) gAATACTCCACACCATGCCAATAATGATCACAATATAGACAACCAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTaa < 1:1152863/150‑1 (MQ=255) aaTACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATATTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAAc < 2:1080706/150‑1 (MQ=255) aTACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACg > 1:699680/1‑150 (MQ=255) aTACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACg > 1:2853206/1‑150 (MQ=255) tCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGa > 1:3543127/1‑150 (MQ=255) tCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGa > 2:472947/1‑150 (MQ=255) ccATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGtt > 2:281438/1‑150 (MQ=255) aTGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCt > 2:2526339/1‑150 (MQ=255) aTGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGGGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCt < 1:4408408/150‑1 (MQ=255) gcaaataatGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTaa < 2:3910234/147‑1 (MQ=255) gCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTaa < 1:1001666/150‑1 (MQ=255) aataatGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTaaaaa > 1:4296706/1‑150 (MQ=255) taatGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAAca > 1:4705076/1‑150 (MQ=255) gATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAAcagcag > 2:2438256/1‑150 (MQ=255) aTCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGt > 2:1352715/1‑150 (MQ=255) tCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTa > 1:2006211/1‑150 (MQ=255) tCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTa > 1:686487/1‑150 (MQ=255) cacaATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTaa < 2:4364114/150‑1 (MQ=255) cacaATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTaa > 2:5083/1‑150 (MQ=255) aaTATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACaa < 2:4551318/150‑1 (MQ=255) ataGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGAc > 1:2049232/1‑150 (MQ=255) taGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACa > 2:2299286/1‑150 (MQ=255) taGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACa > 2:2299078/1‑150 (MQ=255) gACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAgg > 1:2214620/1‑150 (MQ=255) aaaCAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTaa > 1:637128/1‑150 (MQ=255) aCAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTaaaa > 1:1772430/1‑150 (MQ=255) aCAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTaaaa > 1:590471/1‑150 (MQ=255) cAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTaaaaa > 1:2184516/1‑150 (MQ=255) gCATATTTGAAGTGACTTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAg < 1:2362990/150‑1 (MQ=255) aTAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAATCGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTg < 2:3694072/150‑1 (MQ=255) aaGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATgg > 1:3346149/1‑150 (MQ=255) aaGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATgg > 2:2106641/1‑150 (MQ=255) aGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGt > 1:4527591/1‑150 (MQ=255) tGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAGTCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGa > 2:2986086/1‑150 (MQ=255) gTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATggg > 1:2498451/1‑150 (MQ=255) gTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATggg < 1:4033755/150‑1 (MQ=255) tATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATgggg > 2:4129357/1‑150 (MQ=255) tATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATgggg > 2:3698636/1‑150 (MQ=255) aTTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGa > 2:4153909/1‑150 (MQ=255) tttACTGGCATCCAGCGACTGACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGaa > 1:1377546/1‑150 (MQ=255) cTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAATTTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAAca < 1:293454/150‑2 (MQ=255) cTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACtt > 2:1727191/1‑150 (MQ=255) cTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACtt > 2:4220491/1‑150 (MQ=255) cTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACtt > 2:1156385/1‑150 (MQ=255) ggCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTc > 1:1193400/1‑150 (MQ=255) aGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACACGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGc > 2:442926/1‑150 (MQ=255) tGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCg < 1:1352715/150‑1 (MQ=255) gACCAAACAGATAGTTAAAAGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGa > 2:2915077/1‑150 (MQ=255) aCCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGAt < 1:4515799/150‑1 (MQ=255) aaaCAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGAtttt > 1:2158912/1‑150 (MQ=255) aaaCAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGAtttt < 1:99875/150‑1 (MQ=255) aaCAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTg < 2:3326621/150‑1 (MQ=255) aaCAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTg < 1:3873068/150‑1 (MQ=255) cAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGGAAAAAAGTGACGAGGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGAc > 2:1621130/1‑150 (MQ=255) aTAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGtt < 1:4333426/150‑1 (MQ=255) aTAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGtt > 1:4272092/1‑150 (MQ=255) aTAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGtt < 2:637128/150‑1 (MQ=255) tAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTa < 2:1902683/150‑1 (MQ=255) tAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTa > 2:3433268/1‑150 (MQ=255) gTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAAc < 1:2718278/150‑1 (MQ=255) ttAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAAcc > 1:207597/1‑150 (MQ=255) ttAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAAcc < 2:3133924/150‑1 (MQ=255) tAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAACca > 2:1511553/1‑150 (MQ=255) aaaCGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAACcag > 1:3897137/1‑150 (MQ=255) aCGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAACcagca < 2:2772330/150‑1 (MQ=255) cGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAACcagcag > 1:410476/1‑150 (MQ=255) | AAACGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCGCGCCAATCCCTAAGGCAATCATCAA‑TTTTTTAACGCTGATGCGTTCTAAAAACAGCAGTAACAAGACAGGTAAAAAAGTGACGATGGTGATGGGGAAACTTTCGCCAAGCTGGGCGATTTTGACGTTAACCAGCAG > CP009273/2124010‑2124308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |