| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,724 | G→T | 26.7% | intergenic (‑41/+267) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,724 | 0 | G | T | 26.7% | 192.4 / 13.7 | 106 | intergenic (‑41/+267) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (30/41); new base T (20/9); total (53/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATA > CP009273/2170575‑2170872 | tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑g < 2:4241735/150‑1 (MQ=255)tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑g < 1:4119311/150‑1 (MQ=255)tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑g < 1:2797883/150‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑Ga < 1:4276187/150‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑Gaa < 1:129485/150‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑Gaa < 1:129511/150‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑Gaa < 1:2285113/150‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑Gaa < 1:2285329/150‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAatt < 2:1395856/150‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTAttt < 1:2901812/150‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGt < 2:2631416/150‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGt < 2:2630223/150‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGttt < 1:2733062/150‑1 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGtttt < 2:224996/150‑1 (MQ=255) tGCATCGTTTCGAGATTGAGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGtttt < 2:224816/150‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGttttt < 2:2715742/150‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑AAAAATATAAT‑GTAAATATtttttttt > 2:3412478/1‑150 (MQ=255) aTCGTTTCGAGATTGTTAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTaa < 2:3556465/150‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTTATTT‑AAAAATATTAA‑TAAAtttttttttttttttt > 1:4191188/1‑146 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAata < 2:458690/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGACGTTTGTTTTAGATAT‑ATAAATATAAT‑GTAAATATATTTTTTTAAata > 1:2013441/1‑150 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTAAAAAAAAAAATAAAAATTTTTTTTTTTTatatata > 1:605481/1‑149 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGGTTT‑AAAAAAAAAAA‑TAAAATATTTTTTTTTtaaaaaata > 1:605192/1‑144 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGTATTT‑AAAAAAATAAT‑AAAATTATTTTTTTTTTAaaatata > 1:605271/1‑147 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCgaga < 1:3252264/150‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCgaga < 1:376262/150‑1 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑AAAAATATAAT‑GAAATTATTTGTTTTTTAATATAGAGATaa > 2:2360282/1‑150 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAAc < 2:1445450/150‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAAc < 2:3836316/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:3013024/150‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATcaca < 2:857156/150‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATcacc > 2:3131013/1‑149 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑AAAAATATAAT‑TAAAATATTTTTTTTTTAATATAGAGATAAAGAtaaaa > 2:3349841/1‑146 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATGTTCATATCCTGTCGTTTGTGTTAGATTT‑GAAAAAATAAA‑TAAATAAATTGTTTTTAAATATAGAGATGActaaaaaa > 2:3349832/1‑143 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACaa < 2:4040585/150‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACaa < 1:2724442/150‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTT‑AAAAATATAAT‑GAAATTATTTTTTTTTATATTTCGAGATAACGGTCTCaa > 2:2984818/1‑150 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGTTTTT‑AAAAATAAAAA‑TAAAATATTTTTTTTTTTATATATAGATAAACATCaaaaaa > 1:1319328/1‑150 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTT‑AAAAATATAAA‑GAAAATATTTTTTTTTAAATATATAGATTACGATCACaaaa > 1:2997265/1‑150 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTT‑CAAAAAAAAAT‑TAAATTATTTTTTTTTTTATATAGAGGGAAAGATCACaaaa > 1:627522/1‑150 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAAc < 2:849488/150‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTT‑AAAAAAATAAT‑TAAAATATTTTTTTTTAAAAATAGAGATAAAAAACAaaaaaaa > 2:3676275/1‑149 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑TAAAATATAAT‑TAAAATATTTGTTTTTAAATATAGAGATAACCAACACAAAAAc > 2:3676725/1‑150 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑AAAAATATAAT‑GAAAATATTTTTTTTTTAATATAGAGATAACGATCACAAAAACGACa > 2:1729816/1‑150 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑AAAAATATAAT‑GAAATTATTTGTTTTTTAATATCGAGATAACGATCACAAAAACGACaa > 2:2692681/1‑150 (MQ=255) aaCCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTGTTCGAGTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATAGAGATAACGATCACAAAAACGACAata > 2:3699414/1‑150 (MQ=255) ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTT‑CAAAATATAAT‑TAAATTATTTTTTTTTTAATATAGAGATAAAGATAACAAAAACGACAATATg > 2:2348259/1‑150 (MQ=255) ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTT‑GAAAAAAAAAT‑TAAAATATTTTTTTTTTTAAATAGATATTAAGATCACAAAAAAGACaaaaag > 1:653696/1‑146 (MQ=255) gaaTAACCGCCGCGCTGTGCTTTGTTCAGCATATGATTTGTCGATACAACTTACATTTTCATATCCTGTCTTTTTTTTTCTATTT‑CAAAATATAAT‑TAAATTATTTGTTTTTAAATATCGATATAACTATCACAAAAACGACAATATGaa < 2:1404571/148‑1 (MQ=255) tAACCGCCGCGCTGTGCTTTGTTCAGCATCTTCTTTGTCTATACCACTTACTTTTTAATATCCTGTCTTTTTTTTTCTATTT‑AAAAATATAAT‑GAAATTTTTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAat < 1:1160104/150‑1 (MQ=255) cccgccgCGGTGTGCGTTGTTCAGCATCTGCTTTGTCTATACCACTTAAATTTTAATATCCTGTGGTTTGTTTTCTATTT‑AAAAATATAAT‑GAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAatta < 2:442312/149‑1 (MQ=255) cccgccgCGCTGTGCGTTGTTCCGAATCTGCTTTGTCTATACCACTTAAATTTTCATATCCTGTCGTTTGTTTTCTATTA‑CAAAATATAAT‑GAATTTATTTTTTTTTAAATATGGAGATAACTAACACAAACACGACAATATGAAAatta < 2:442359/149‑1 (MQ=255) cgccgcGCTGTGCGTTTTTCAGCTTCTGCTTTGTCGATACCACGTACATTTTAATATCGTGTCTTTTGTTTTCTATTA‑CAAAATTTAAT‑GAAATTATTTGTTTTTAAATATCGATATAACCATCACAAACACGACAATATGAAAattatt < 2:2452934/150‑1 (MQ=255) ggtgggCGTTGTTCAGCTTCTGGTTTGTCGATACCACGTACTTTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑TAATTTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCgagga < 1:3131013/145‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTT‑AAAAAAAAATT‑TTAATTATTTGTTTTTTAATATCGAGTTAACCATCTCAAAAAAGCCAAAAAGAAAATTATAAGAGGGGt > 2:829631/1‑150 (MQ=255) cGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGGTTT‑AAAAATAAAAT‑TAAAATATTTTTTTTTTAATATATTTATAAAAATAACAAAAAAAACAAAAATAAAATTATTAGTGGAGTGtaa > 1:1736570/1‑150 (MQ=255) cAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTT‑GAAAATAAAAT‑TAAAATATTTTTTTTTAAATATAGAGAAAAACAAAACAAAAAACACCAAATGAAAAAAATTATAGGAGTGGAACGCaaaa > 1:2696485/1‑150 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTT‑TAAAAAAAAAT‑TAAAATAATTTTTTTTAAATAAAGAGATAAACAAAACAAAAAACACAAAATTAAAAATATTCTATGAGTGAAAGGCcaaaaaa > 1:3161467/1‑150 (MQ=255) ttCTGCTTTGTCTATACCACTTACTTTTTCATATCCTGTCGTTTTTTTTCGATTT‑CAAATTATATT‑GAATTTATTTGTTTTTAAATATCGATATAACGAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:61746/149‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTT‑CAAAATATAAT‑CAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:4222364/150‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTATTT‑AAAAAAATAAA‑AAAAATATTTTTTTTTAAAAATATAGTTAAAGAAAAAAAAAAAAAAAAAATTAAAAATATTCGAGGAGTGAAATGCaaaaaaaa > 2:1637045/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTT‑AAAAATATAAA‑TTAAATATTTTTTTTTAAAATACGAGATAAACAAAACAAAAAACAAAAAAATAAAAATAATATTGGCGTGAAAGGCcaaaaaaa > 2:1637026/1‑149 (MQ=255) aTCTGCTTTGTCGATACCACATACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTTTTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 2:381923/150‑1 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGCTTT‑AAAAATATAAA‑TAAAATATTTTTTTTTTAAAATACTTATAAAAAAAACAAAAAAAACAAAAATAAAAAAATTAGAGGAGTGTAAGGCaaaaaaaac > 2:459750/1‑148 (MQ=255) cTGCTTTGTCCAAACAACTAACATTTTAATATCCTTTCTTTTTTTTTCGATTA‑AAAAATAAAAA‑GAAATTATTTTTTTTAAAATATCGAGAAAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACgg < 2:478498/150‑1 (MQ=255) cTGATTTTTCTATACCAATTAAATTTACATATCCTTTCGTTTTTTTTCTATTT‑AAAAATATAAT‑TAATTTATTTGTTTTTAAATATCTAGAAAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACgg < 2:478563/150‑1 (MQ=255) tCGAAACCACGTAAATTTTCATATCCTGTCGTTTTTTTTCTATTT‑CAAAATATAAT‑CAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGa < 2:3842212/150‑1 (MQ=255) ccttACTTTTTCATTGCGTGTGGTTTTTTTTCTATTA‑AAAAATATAAT‑GAATTTTTTTTTTTTTAAATATCGAGATACCGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 2:825411/147‑1 (MQ=255) aCATTTTCATATCCTGTCGTTTGTTTTGGATTT‑AAAAAAAAAAT‑TAAAATATTTTTTTTTTAATATAGAGATAAAGATAACAAAAACGCAAATATGAAAATTATTCGAGGCGTGAAAGGCCAAAAAAAGGCCCCCCGCTTGGGCAGccct > 2:3038998/1‑148 (MQ=255) aCATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑CAAATTATTTGTTTTTAAATATCGAGATAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 2:201144/150‑1 (MQ=255) aCATTTTCATATCCTGTCGTGTTTTTTCGATTT‑CAAAATATAAT‑GAAAATATTTTTTTTTAAATATAGAGATAACCATCACAAAAAACCAAATATGAAAATTATTCGCGGAGTGTAAGGCAAAAAAACGGCCAACCCGGAGGGCAGCCGt > 2:3038974/1‑150 (MQ=255) ttCATATCGTTTTTTTTGTTTTCTTTTT‑AAAAATATAAT‑TAATTTTTTTTTTTTTAAATATCTATATAACTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 2:3585454/150‑1 (MQ=255) tCCTGTCGTTTTTTTTAGATTT‑CAAAAAATAAT‑GAAATTATTTTTTTTTAAATATCGAGAAAACGAAAACAAAAAAGACAAAATTTAAATTATTCGAGGAGTGAAAGGCAAAAAAAAGGCCACCCGATAGGGAAGCCCTAGCAAAATgcg > 2:701024/1‑150 (MQ=255) tgtgtttttttttCTATTT‑AAAAATATATT‑TAATTTTTTTTTTTTTAATTTTCTATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt < 2:1203182/145‑1 (MQ=255) tGTCGTTTTTTTTCTATTT‑AAAAATATAAT‑TAAATTATTTTTTTTTAAATATCGAGATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt < 2:3598053/150‑1 (MQ=255) gtttgtttTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGACGCCGTAGCAAAGTGCGCGTGttt > 2:4018226/1‑150 (MQ=255) gtttgtttTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:4137930/1‑150 (MQ=255) gtttgtttTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:4017671/1‑150 (MQ=255) ttttCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:2211302/1‑150 (MQ=255) aTTT‑CAAAATTTAAT‑GAAATTTTTTGTTTTTAAATATCGAGATAACGTTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 2:1732940/150‑1 (MQ=255) ttt‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 1:4538798/1‑150 (MQ=255) attaaaaaaaaTAAT‑GAAATTATTTTTTTTTAAATATCGAGATAACTAACACAACCACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:1729816/145‑1 (MQ=255) ttaaaaaaTATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGAACACAACAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 2:479250/146‑1 (MQ=255) cAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:4243752/1‑150 (MQ=255) aaaaTATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:4481061/1‑150 (MQ=255) aaaTATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 2:320461/1‑150 (MQ=255) aaaTATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 1:4142863/1‑150 (MQ=255) aaaTATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 2:1083778/1‑150 (MQ=255) aaTATAAT‑TAAATTATTTGTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt < 1:3086583/150‑1 (MQ=255) atatAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:2714282/1‑150 (MQ=255) atatAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:2714309/1‑150 (MQ=255) tataAT‑TAAATTATTTTTTATTAAATATCGACATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa < 2:3111094/150‑1 (MQ=255) taat‑aaAATTTTTTTTTTTTAAATATCTATATACCGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc < 1:508648/150‑1 (MQ=255) taAT‑TAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc < 2:3319112/150‑1 (MQ=255) taAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 1:4528454/1‑150 (MQ=255) taAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 2:73961/1‑150 (MQ=255) aaT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa > 1:3610498/1‑150 (MQ=255) aT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:1909513/1‑150 (MQ=255) aT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:1909406/1‑150 (MQ=255) t‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa > 1:1704288/1‑150 (MQ=255) | TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTT‑CAAAATATAAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATA > CP009273/2170575‑2170872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |