| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,447,536 | C→A | 7.4% | pseudogene (945/2646 nt) | yfcU ← | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,447,536 | 0 | C | A | 7.4% | 976.1 / 35.8 | 265 | pseudogene (945/2646 nt) | yfcU | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (106/137); new base A (13/9); total (119/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 269 total aligned reads displayed.
CGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGG > CP009273/2447387‑2447684 | cGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATc < 1:4449076/150‑1 (MQ=255) gAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATca < 1:1949611/150‑1 (MQ=255) gAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTAAATGCGAATATTCAACGTTCCGGAGACGGAATCACCAAGATCCAGAAAACGAAACGGTCCAGCCGGAACCAGCGTTTCGTAAATAACACg > 1:4385277/1‑150 (MQ=255) gAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTGCTGTTGTTGAATGCGAATATTCAACGGACCGGAGACGGAAAAAACAACATCCAGAATACGAAACCGTCCCGCCCGAAACAGCGTTTCGTAAATCACACg > 1:1197910/1‑150 (MQ=255) aGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATTCCACGTACCGGAGACGGAATCACCAAGATCCAGAAAACGAAAAGGTCCAGCCGGAACCAGCGTTTAGTAAAAAacaccc > 1:1822494/1‑148 (MQ=255) aGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGc > 2:4542408/1‑150 (MQ=255) tATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTGTGTTCTTAAATTCGAATAAGCAAAGTACCCGAGACGGAATCACCAAGATCCAGAAAAAGAAAAGGTCCAGCCGGAACCAGCGTTTCGTAAATAAAAcccccc > 1:3639123/1‑150 (MQ=255) tATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGcccc < 2:3018970/150‑1 (MQ=255) tGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCAt < 2:1647978/150‑1 (MQ=255) tGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCAt < 2:3223489/150‑1 (MQ=255) tGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCAt < 2:4628078/150‑1 (MQ=255) gCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCt < 2:1897947/150‑1 (MQ=255) gCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCt < 2:3726864/150‑1 (MQ=255) cATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAAACACACGCCCCATCTg > 2:4436039/1‑150 (MQ=255) gAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTGCTGTTCTTCAATGCGCATATTCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCCGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTg > 1:587501/1‑150 (MQ=255) cGGTGCTGATGTCATATTCCTGCACCTGGCCGTTGTGTTGTTCAATTCGAATATTCAACGTACCGGAGACGGAATCACCAAGATCCTGAATAAGAAAAGGTCCAGCCGGAACCAGCGTTTCGTAAATCACACGCCCCCACTGGCTGACgg > 1:977241/1‑150 (MQ=255) ggTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGt < 1:747942/150‑1 (MQ=255) ggTGCTGATGTCATAGTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGt < 1:3115830/150‑1 (MQ=255) gTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTc < 1:2267919/150‑1 (MQ=255) tGATGTCATATTCCTGCACCTGGCCGTTCTGTTATTCAAAGCGAATATTCAACGTAACGGAGACGGAATCACCAAGATACAGAATACGAAACGGTCCAGCCGGAAACAGCGTTTCGTAAATAACACGCCCCATCTGGCTGACGGTCAcat > 1:2292921/1‑148 (MQ=255) tCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCt < 1:469859/150‑1 (MQ=255) tCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCt < 1:1431578/150‑1 (MQ=255) tatTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGACTACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATAACACGCCCCATCTGGCTGACGGTCACTTTTGCtgtg < 2:3396321/150‑1 (MQ=255) ttCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTgtggt < 2:1456124/150‑1 (MQ=255) tCCTGCACCTGGCCGTTCTGTTCTTAAAAGCGAATATTCAACGTAACCGATACGGAATCACCAAGATACATAATAAGAAAAGGTCCAGCCCGAACCTGCGTTTAGTAAATAACACGCCCCCACTGGCTGAAGGTCACTTTTGCTgtggtg > 1:1451768/1‑150 (MQ=255) tCCTGCACCTGGCCGTTCTGTTATTCAAAGCGAATATGCAACGTACCGGAGACGGAAACACCAAGATCCTGAAAACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTgtggtg > 2:575808/1‑150 (MQ=255) ccTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGgtgt < 2:1305865/150‑1 (MQ=255) ccTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGgtgt < 2:2010364/150‑1 (MQ=255) cTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGgtgtg < 2:3867372/150‑1 (MQ=255) tGCACCTGGCCGTTCTGTTATTCAATGCGAATATGCAACGTAACGGAGACGGAATCACCAAGATCCAGAATACGAAACCGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCCTCTGGCTGACGGTCACTTTTGCTGTGgtgtgt > 2:2910758/1‑150 (MQ=255) cACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGc < 2:3585443/150‑1 (MQ=255) aCCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGcc < 2:2994602/150‑1 (MQ=255) ccTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCa > 2:3533086/1‑150 (MQ=255) cTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCAc > 2:1996429/1‑150 (MQ=255) cGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCgg < 1:3009775/150‑1 (MQ=255) ctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAAt > 1:241841/1‑150 (MQ=255) ctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAAt < 2:71792/150‑1 (MQ=255) ctgttctTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATAACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAAt > 2:1509124/1‑150 (MQ=255) cttcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTg < 2:2670588/150‑1 (MQ=255) cttcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTg < 2:1569269/150‑1 (MQ=255) tcAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGgc < 1:830517/150‑1 (MQ=255) cAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATAACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGgcg < 1:2075567/150‑1 (MQ=255) gCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTa < 2:3180941/150‑1 (MQ=255) gCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTa < 2:3340962/150‑1 (MQ=255) atatGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATAACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCcg > 1:3920922/1‑150 (MQ=255) cAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAg < 2:3930532/150‑1 (MQ=255) cAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAg < 2:1092013/150‑1 (MQ=255) aaCGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGa > 1:4577916/1‑150 (MQ=255) aaCGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCAACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGa > 1:2196205/1‑150 (MQ=255) aCGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGAt < 1:1423944/150‑1 (MQ=255) cGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGAtt > 1:3521904/1‑150 (MQ=255) cGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGAtt > 1:2156443/1‑150 (MQ=255) gTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTg < 1:785297/150‑1 (MQ=255) gTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTg > 2:193395/1‑150 (MQ=255) aCCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTggg > 2:1485883/1‑150 (MQ=255) ccGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGa < 1:1999885/150‑1 (MQ=255) agaCGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCa > 1:1826032/1‑150 (MQ=255) gaCGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCaa < 2:4357814/150‑1 (MQ=255) cGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACa < 1:371604/150‑1 (MQ=255) ggAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCCTCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAt > 1:2515098/1‑150 (MQ=255) ggAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACAt > 1:1028035/1‑150 (MQ=255) cACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCAATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGACGCGCAGATTGTGAGGCAACATTTGAt > 1:1784818/1‑150 (MQ=255) aCCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATc > 1:4212084/1‑150 (MQ=255) aCCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATc < 2:2643580/150‑1 (MQ=255) ccAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCg > 2:2358225/1‑150 (MQ=255) cAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGt < 2:1822504/150‑1 (MQ=255) cAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCCGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGt > 1:4614484/1‑150 (MQ=255) aTCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGt > 2:1913513/1‑150 (MQ=255) tGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTg > 2:2472284/1‑150 (MQ=255) gAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGa > 2:4534612/1‑150 (MQ=255) aTACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGaca > 1:2494745/1‑150 (MQ=255) cGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTg > 2:1753021/1‑150 (MQ=255) cGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTg < 2:4288227/150‑1 (MQ=255) cGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTg > 2:3440015/1‑150 (MQ=255) cGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATAACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTg < 2:4706080/150‑1 (MQ=255) aaaCGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGcc < 2:2627422/150‑1 (MQ=255) ggTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGccacca > 1:1514115/1‑150 (MQ=255) ggTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGccacca < 2:1818956/150‑1 (MQ=255) gTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCaa < 1:4454394/150‑1 (MQ=255) ccAGCCGGAACCTGCGTTTCGTAAATCACATGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACa < 1:4100600/150‑1 (MQ=255) ccAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACa > 2:4172483/1‑150 (MQ=255) ccAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCCGACACTGCCACCAACa < 1:2776832/150‑1 (MQ=255) cGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAAtt < 1:263100/150‑1 (MQ=255) cGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAAtt < 2:241841/150‑1 (MQ=255) ggAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTa < 1:3299607/150‑1 (MQ=255) aaCCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTATCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTaaa < 2:4134147/150‑1 (MQ=255) aaCCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTaaa > 2:4477233/1‑150 (MQ=255) ccTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAAc < 2:2747192/150‑1 (MQ=255) ccTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAAc < 1:3592723/150‑1 (MQ=255) ccTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAAc < 1:1061758/150‑1 (MQ=255) gTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTTATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCg < 1:1380601/150‑1 (MQ=255) gTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCg < 1:3204163/150‑1 (MQ=255) tttCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGa < 1:2402907/150‑1 (MQ=255) gTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAat < 1:2952367/150‑1 (MQ=255) gTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAat > 1:3325886/1‑150 (MQ=255) tAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAata < 2:1197910/150‑1 (MQ=255) aaaTCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAACatat > 2:3769352/1‑150 (MQ=255) aaaTCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAatat < 1:852404/150‑1 (MQ=255) aTCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCCACATAATTAAAACCGTCGAAAATATCg > 1:2467198/1‑150 (MQ=255) tCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAATTGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCgg < 2:579657/150‑1 (MQ=255) | CGAGTGAGGTATGGCATCGAGGCGGTGCTGATGTCATATTCCTGCACCTGGCCGTTCTGTTCTTCAATGCGAATATGCAACGTACCGGAGACGGAATCACCAAGATCCTGAATACGAAACGGTCCAGCCGGAACCTGCGTTTCGTAAATCACACGCCCCATCTGGCTGACGGTCACTTTTGCTGTGGTGTGTGCCACGCCGGAAATGTCTGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGG > CP009273/2447387‑2447684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |