| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,730,313 | G→A | 23.9% | intergenic (+71/‑200) | bamD → / → raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,730,313 | 0 | G | A | 23.9% | 285.8 / 99.0 | 158 | intergenic (+71/‑200) | bamD/raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| Reads supporting (aligned to +/- strand): ref base G (28/85); new base A (14/23); total (50/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.17e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
GCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACATTTTGACATC > CP009273/2730165‑2730462 | gCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGc > 2:1359059/1‑150 (MQ=255) tACCGTCAGATGCAGTTGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGAAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGAt < 1:2933054/150‑1 (MQ=255) ccGTCAGATGCAGATGAAGGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGAttt < 2:3011507/150‑1 (MQ=255) cGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTa < 2:1517294/150‑1 (MQ=255) cGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTa < 2:3908613/150‑1 (MQ=255) cGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTATGTCAGTTGTGAAAATGAATCGATTTa > 2:674308/1‑150 (MQ=255) gTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACAGAAACGATTTat > 2:3688120/1‑149 (MQ=255) tCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGt > 2:611792/1‑150 (MQ=255) gatgcagatgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGAGTTAGTCGc > 1:337291/1‑150 (MQ=255) agatgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACATAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCg < 2:2325512/150‑1 (MQ=255) agatgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGACACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCg < 2:2325576/150‑1 (MQ=255) atgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCCCAAACAGCACCAATACATAACCGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTATTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGAt < 2:4099621/150‑1 (MQ=255) gAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAAATGAAGCGATTTAGTCGCTATCGctct > 2:1442419/1‑150 (MQ=255) aggcgcAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtca < 2:1657594/148‑1 (MQ=255) aTGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTGTTTTTTTTGTGTGAGTTTTGTAAATGTACCCATTTTGTGGCTATCGAtgaga > 1:2899574/1‑146 (MQ=255) aTGCGCAAGCTCAAAAAGTAGCGAAAATCCTCGCCGCAAACAGCAGCAATACATAACACAAACCTGAAACACAACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtca < 2:4206964/150‑1 (MQ=255) tGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTATGTCAGGTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcat > 2:2141012/1‑150 (MQ=255) tGCGAAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATACAAGAAACCTCAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcat < 1:1018211/150‑1 (MQ=255) aaGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAat > 2:1845494/1‑150 (MQ=255) aGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTGTTTTTTTTATGTCAGGTTTTTAAAAGAAAAGAATTAGTCGCGAACGATCACATCaaaaa > 1:3587661/1‑148 (MQ=255) gCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAACCGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAatat < 2:571453/150‑1 (MQ=255) gCTGAAAAAGTAGCGAAAATCAGCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAatat < 2:2434424/150‑1 (MQ=255) cttaaaaaTTAGCCAAAATCACCGCCGCAAACAGCACAAATACATAACATAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATg < 1:490978/147‑1 (MQ=255) cTGAAAAAGTAGCTAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATg < 1:1063762/150‑1 (MQ=255) tGAAAAAGAAGCGAACAACCCCGCCGCAAACACCCCAAATCCAAACCAGAACCCTCAACCACAACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATgg < 1:886520/150‑1 (MQ=255) gAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCATTTGTGAAACTGAAGCGATTTAGTAGCTATCGATCTCATCAAATATTGc > 2:2640070/1‑150 (MQ=255) aaaaaGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCt > 2:4718280/1‑150 (MQ=255) aaaTTAGCTAAAATCAACGCCGCAAACAGCAGCAATACAAAACATAACCCTTAAACACAACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCg < 1:530956/150‑1 (MQ=255) aaaGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAAATGAAGCGATTTAGTCGCAAGAGGTGTCATCAAAAATGGcgcg > 1:1852469/1‑150 (MQ=255) attAGCTAAAATCATCGCCCCAAACACAAGAAATACAAAAAACAAACCTGAAAAACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCt < 1:507830/148‑1 (MQ=255) aGTAGCTAAAATCATCGCCGCAAACAGCAGAAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCt < 1:1720852/150‑1 (MQ=255) gTAGCTAAAATCATCGCCGCAAACATCAGAAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCtt < 1:1312221/150‑1 (MQ=255) aGCTAAAATCATCGCCGAAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTg < 2:4324679/150‑1 (MQ=255) aGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTg > 2:1691342/1‑150 (MQ=255) aGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTg > 2:2221164/1‑150 (MQ=255) aGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCGATCGATCTCATCAAATATGGCTCGGtttt > 2:4078485/1‑149 (MQ=255) cGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTgag < 1:347969/150‑1 (MQ=255) gAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTATTTCAGTTGTGAAACTGAATCGATTTAGTCGCTATCGATCTCATAAAAAATTGCTCGCGTTgtga > 1:1495449/1‑150 (MQ=255) aaaTCAACGCAGCAAACAGCAGCAATACATAACAGACACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGata < 2:2638899/150‑1 (MQ=255) aaTCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGatat < 2:4261077/150‑1 (MQ=255) tcGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTc < 1:3310711/150‑1 (MQ=255) tcGCCGCAAACAGCAGAAATACATAACACAAACCTGAAACACAAACCGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTc < 1:2188851/150‑1 (MQ=255) cgccgcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCa < 2:1256194/150‑1 (MQ=255) gccgcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCaa < 2:1772275/150‑1 (MQ=255) cgcAAACAGCAGCAATCCATAACAGAAACCTGAAACACAACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGt < 1:1775166/150‑1 (MQ=255) gcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTATGTAAGTTGTTAAAATGAAACGATTTTTTCGCTATAGATCTCATCAAATATGGCTCGCTTTTTGATATTACTCAAGTa > 1:766375/1‑150 (MQ=255) aaaccagcagCAATACATAACAGAACCCTCAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTaa < 1:4444019/146‑1 (MQ=255) aaaCAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTATGTCAGTTGTGAAACGGAAGCGATTTAGTAGCAATCGATATCATCAAATATGGCTCGCTTTTTGATATTCCTCaatgtaa > 1:3488899/1‑145 (MQ=255) aaaCAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTGTTTTTATTATGTCAGTTGTGTAACAGAATCGATTTATGAGCGATCGAGCTCCTCAAAAATGGCTCGCTTTGAGATAATCCGCAAGaaaa > 1:4190633/1‑150 (MQ=255) aaCAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTGTTTTTATTCTGTCAGTTGTGGAACTGAAGCGATTTAGTCGCGATCGCTCTCATCAAATATGGCGCGCGTTGTGCTAATCCTCAAGTaaaa > 2:4427048/1‑150 (MQ=255) cagcaATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACAGAAGAGATTTAGTCGCAATCGATCACATCAAAAAAGGCTCGCTTTGAGATATTACTCAAGTaaaaaaaaa > 1:1825917/1‑148 (MQ=255) aaTACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTGTTTTTTTTCTGTAAGTTTTGTAACAGAATCGATTTAGTCGCGATCGATGTCATCAAATATTTCGAGCTTTGTGTTATTACTCAATTAAAAAAACaaatc > 2:1591099/1‑146 (MQ=255) aaTACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTGTTTTTATTCGGTCAGGTGTGAAACAGAAGCGATTTAGTCGCTCTCGATCTCAGCAAAAATGGCTCGCGTTGAGATATTCCACAACGAAAAAAACAactc > 2:2837333/1‑150 (MQ=255) cctAACAGAAACCTGAAACACAACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTcc < 2:118425/148‑1 (MQ=255) cATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTTTTATGTCAGTTTTGGAACTGAAGCGATTTAGTCGCGATCGATCTCATCAAATATGGGTCGCTTTGAGATATTACTAAAGTAAAAAAACATATCTTcc > 2:1347224/1‑150 (MQ=255) aTAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCt < 2:3434677/150‑1 (MQ=255) aTAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCt < 2:3434708/150‑1 (MQ=255) aCATAACCCTTAAACACCACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCg < 1:3963172/150‑1 (MQ=255) aCAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCg < 2:3413786/150‑1 (MQ=255) aCAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCg < 2:709945/150‑1 (MQ=255) aaaCCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTTTTCTGTCAGTTGTGTAACTGAAACGATTTAGTCGCTAACGGTCTCATCAAATATGGCTCGCTTTGAGTTATTCCTCAAGTAAAAAAACATCTCTTCCTGCGAttt > 2:1523623/1‑150 (MQ=255) aCCTGAAACACAACACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTtct < 1:3067856/150‑1 (MQ=255) ccTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTTTTATTTCCGTTGTGAAACAGAAACGATTTTTTCGCTATCGTTCTCATCAAATATGGGTCGCTTTGAGATAGTACGCAAGTAAAAAAAAATCTAGTACTGCGAtttata > 2:3628684/1‑147 (MQ=255) tGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGTTCTCATCAAATATGGCTCGCTTTGAGATATTCCGCAAGTAAAAAAAAATCTCTTGCGGCGCTGTCTcac > 2:3079281/1‑150 (MQ=255) aaCGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGAtt < 1:1162396/150‑1 (MQ=255) aaCGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGAtt < 1:1162384/150‑1 (MQ=255) aaCGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGAtt < 2:1947715/150‑1 (MQ=255) cAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTg < 1:2275938/150‑1 (MQ=255) cccTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACa < 2:3842370/150‑1 (MQ=255) gCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTg < 2:3310976/150‑1 (MQ=255) cTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGa > 2:241581/1‑150 (MQ=255) cGTTTTTTTATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACaaa > 1:720394/1‑150 (MQ=255) tttttttATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAAt < 2:1865547/150‑1 (MQ=255) tttttttATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAAt < 1:1253046/150‑1 (MQ=255) tttttttATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAAt < 1:1254677/150‑1 (MQ=255) ttttttATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAAtt < 2:4024995/150‑1 (MQ=255) tttttATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTa < 1:2047771/150‑1 (MQ=255) tttATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATg < 1:2066790/150‑1 (MQ=255) tttATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATg > 1:4044762/1‑150 (MQ=255) tttATTCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATg < 1:1549838/150‑1 (MQ=255) ttATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATga < 1:611792/150‑1 (MQ=255) ttCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGAt < 1:108363/150‑1 (MQ=255) ttCTGTCAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGAt < 1:108366/150‑1 (MQ=255) tGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGAtttt < 1:3843100/150‑1 (MQ=255) tGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGAtttt < 1:1400102/150‑1 (MQ=255) tGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGAtttt < 1:1400272/150‑1 (MQ=255) tGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGAtttt < 1:3842079/150‑1 (MQ=255) gTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTtc < 1:607127/150‑1 (MQ=255) cAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTtcat > 1:2165810/1‑150 (MQ=255) cAGTTGTGAAACTGAAACGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTtcat < 1:2814026/150‑1 (MQ=255) aGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTtcatc < 2:1259577/150‑1 (MQ=255) tgAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATcacaca < 2:3231624/150‑1 (MQ=255) tgAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATcacaca > 1:3106269/1‑150 (MQ=255) gAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACAt > 2:4552541/1‑150 (MQ=255) aaaCTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACAtt < 1:3107207/150‑1 (MQ=255) aaaCTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACAtt < 1:4563489/150‑1 (MQ=255) aCTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACAtttt < 1:4718475/150‑1 (MQ=255) aCTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACAtttt < 1:3228962/150‑1 (MQ=255) aCTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACAtttt < 1:4718280/150‑1 (MQ=255) aGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACATTTTGACAt < 2:524649/150‑1 (MQ=255) | GCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAAGTAAAAAAACATCTCTTCCTGCGATTTCTCACAAAAAAGATTCGTTGACAAAAAGTGACAAAATTATGAGATTTTCATCACACATTTTGACATC > CP009273/2730165‑2730462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |