Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,080,755 | T→G | 23.0% | F231V (TTC→GTC) | metK → | S‑adenosylmethionine synthetase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,080,755 | 0 | T | G | 23.0% | 373.3 / 57.2 | 237 | F231V (TTC→GTC) | metK | S‑adenosylmethionine synthetase |
Reads supporting (aligned to +/- strand): ref base T (56/122); new base G (54/5); total (110/127) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.69e-17 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 251 total aligned reads displayed.
TCGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACGT > CP009273/3080606‑3080904 | tCGATGCTGTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtt > 2:701818/1‑150 (MQ=255) gATGCTGTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtgtc > 1:57264/1‑150 (MQ=255) tGCTGTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGtcgtttcgt < 1:3410304/150‑1 (MQ=255) tGTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTAt > 1:3457936/1‑150 (MQ=255) gTCGAGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATc < 2:4024148/150‑1 (MQ=255) gagCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑t < 2:1162361/148‑1 (MQ=255) gagCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑t > 1:4199041/3‑150 (MQ=255) agCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTATAGG‑T‑g > 1:4468363/2‑150 (MQ=255) tttCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATCGG‑T‑GGcc > 2:1204446/1‑150 (MQ=255) tCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCa < 2:3015457/150‑1 (MQ=255) cACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAAt < 2:4534340/150‑1 (MQ=255) cACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATAGG‑T‑GGCCCact > 2:2155410/1‑148 (MQ=255) cTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAGTTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATgg < 2:1281454/150‑1 (MQ=255) tCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATggg < 1:4608000/150‑1 (MQ=255) cAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGt < 2:878481/150‑1 (MQ=255) cAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTATAGG‑TGGGCCCAATggg > 1:3253853/1‑150 (MQ=255) gCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATAGG‑T‑GGCCCACAGGGTgg > 1:3907383/1‑149 (MQ=255) cACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCAATGGGTGAc > 2:2571161/1‑150 (MQ=255) ctctGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTg < 1:4355439/150‑1 (MQ=255) aaGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCCATGGGTGACGGCGGTc > 2:2416221/1‑150 (MQ=255) agagATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCt < 1:1068343/150‑1 (MQ=255) gaTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGAc < 1:2108062/150‑1 (MQ=255) gaTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGG‑T‑GGCCCAATGGGTGACTGCGGTCTGAc > 2:2893036/1‑150 (MQ=255) gaTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGG‑T‑GGCCCAATGGGTGACGGCGGTCTGAc > 2:4257330/1‑150 (MQ=255) aTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACt > 2:4007040/1‑150 (MQ=255) aTCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTTTCGG‑T‑GGGCCCATGGGGGACTGCGGTCTGGCt > 2:1617887/1‑150 (MQ=255) cGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTgg > 1:1110666/1‑150 (MQ=255) cAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGt < 1:2581470/150‑1 (MQ=255) cAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGt < 1:4009784/150‑1 (MQ=255) aaTCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATAGG‑T‑GGCCCCAAGGGTGGCTGCGGGCTGACTGGGGGTaaaa > 1:3673520/1‑150 (MQ=255) tctcTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAAtt < 2:4358713/147‑1 (MQ=255) tCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCAGACTGGTCGGAAAAtt > 2:601998/1‑150 (MQ=255) cGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTATAGG‑T‑GGGCCACTGGGTGGCGGCGGTGTGACTGGTCGGAAAATTa > 2:3261114/1‑150 (MQ=255) gCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTAt < 1:3926931/150‑1 (MQ=255) gCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTAt < 1:4283550/150‑1 (MQ=255) cAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGtt > 2:3413134/1‑150 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTg > 2:712062/1‑150 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTg < 1:4757107/150‑1 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTg < 1:2377034/150‑1 (MQ=255) aagaagCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTg < 2:2652694/150‑1 (MQ=255) cGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCt < 2:536784/150‑1 (MQ=255) cGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGGTGATAACt > 2:4662038/1‑150 (MQ=255) aaTGGAAGTGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGCTACCTAcgg > 2:3143135/1‑150 (MQ=255) aaTGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATAGG‑T‑GGCCCCAATGGTGGATGCGGTCTGACTGGTAGTAAAATTAAAGTTTATACCTAcgg > 1:2666765/1‑150 (MQ=255) aTGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAcggc > 2:3951143/1‑150 (MQ=255) tGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTAcggcg < 2:1992402/150‑1 (MQ=255) aaGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCa > 2:1720551/1‑150 (MQ=255) gagaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATg < 1:1747041/150‑1 (MQ=255) gagaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATg < 1:3547802/150‑1 (MQ=255) gagaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTAGTTATAGG‑T‑GGCCCAAAGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGTTAACAAACGCGGCaag > 1:1759221/1‑148 (MQ=255) agaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTTTAGGTT‑GGCCCAA‑GGGTGTCTGCGGTGGGTCTGGTGGTTAAATTATAGTTGTTAACAAAGGCGGCCTgg > 1:1633832/1‑150 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGgc < 1:4308342/150‑1 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACGGCGGTCTGACTGGTCGTAAAATTATAGTTGATACCAAAGGCGGCATGgc > 2:2922534/1‑150 (MQ=255) gaTCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAAAGGGTGACTGCGGTCTGACTGGGCGTAAAATTAACGTTGATACCTACGGCGGCATGgc > 2:1138433/1‑150 (MQ=255) atcatcAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAAAGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCAACGGCGGCATGgcg > 2:2590006/1‑150 (MQ=255) tcatcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGGGGGTTTAGG‑TGGGCCCAAT‑GGTGGCGGCGGTCTGGCGGGTGGGGAAATTATAGGTGTTAACAAACGCGGCAAGgcgc > 1:3985244/1‑150 (MQ=255) tcaAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTc < 1:621435/150‑1 (MQ=255) caAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCa < 2:1878727/150‑1 (MQ=255) aaGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCAc > 2:1956890/1‑150 (MQ=255) cAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATAGG‑T‑GGGCCCATGGGGGACTGCGGTCTGACTGGTCGTAAAAATATAGTTTTTTACAAACGCGGCATGGCGCGGCACCGTg > 1:4210411/1‑150 (MQ=255) cAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTCCGGCGGCATGGCGCGTCACGGTg < 2:1880678/150‑1 (MQ=255) aTTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCCATGGGTGACTGCGGTCTGACTGGTCGGAAAATTATCGTTGATACCTAAGGCGGCCTGGCGCGTCACGGTGGc > 2:3307353/1‑150 (MQ=255) tCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCgg < 1:74485/150‑1 (MQ=255) tCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGGTGTAGG‑T‑GGCCCCAAGGGGGACTGCGGGCTGTCTGGTCGGGAAATTATCGTTGATTACTAACGCGGCCAGGCGCGGCCCGGGGGCgg > 1:620116/1‑150 (MQ=255) cTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGt < 1:2236804/150‑1 (MQ=255) tGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCAAAGGGGGTCTGCGGTGTGACTGGTCGTTAAATTATAGGTTATACCAACGGCGGCAAGGCGCGTCACCCTGGCgggg > 2:3574063/1‑148 (MQ=255) cccGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCCAAGGGTGTCTGCGGTCTGTCTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCa > 1:1961547/1‑150 (MQ=255) gCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATtc < 1:1198291/150‑1 (MQ=255) cTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATtct < 1:3073963/150‑1 (MQ=255) cTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATtct < 1:2220891/150‑1 (MQ=255) tGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGG‑T‑GGGCCCATTGGTGGAAGCGGTCTGTCTGGTCGTAAAATTATATTTTATACATACCGCGGCAATGCGCGTCACGGGGGCGGTGCATtatc > 1:2928841/1‑150 (MQ=255) tGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTAGTTATAGG‑TGGGCCCCAT‑GGTGTCTGCGGTCTGCCTGGTCGTAAAAATATAGTTTATAACAACGGCGGCAAGGCGCGTCACGGTGGCGGTGCATtctc > 2:1577329/1‑150 (MQ=255) tGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGTTATAGG‑T‑GGGCCCAAGGGTGACTGCGGTCTGACTGGTCGTAAAATTATAGTTGTTACCTAAGGCGGCATGGCGCGTCACCGTGGCGGTGCAttata > 1:3764096/1‑147 (MQ=255) ggCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTGGGTATCGG‑T‑GGCCCCAAGGGTGACAGCGGGCTGACAGGTCGTAAAAATAAAGTTGATAACAACCGCGGCCTGGCGCGGCACCGGGGCGGGGCCTACTCTGGTa > 1:2986919/1‑150 (MQ=255) gCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTaa < 1:4251686/150‑1 (MQ=255) cTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTGTCGTTATAGG‑T‑GGCCCAATTGGTGTCTGCGGTCTGTCTGGTCGTTAAATTATCGTTTATACCAACGGCGGCATTGCGCGTCACGGTGGCGGTGGATTATCTGGTaaa > 2:3419415/1‑150 (MQ=255) cTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGG‑T‑GGCCCCAAGGGTGACTGCGGTCTTACAGGTCGTAAAAATATAATTGATAACAAACGCGGCATGGCGCGTCACCGGGGCGGTGCCTACTATGGTAAatata > 1:2980634/1‑149 (MQ=255) ttCTGCCAACAAATTCTTCATAAACCCGACCGGTCGTGTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTAGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATcc < 1:3214319/150‑1 (MQ=255) tGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATAGG‑T‑GGCCCAAATGGTGTCTGCGGTCTGACTGGTCGTAAAAATATAGTTGATAACAACGGCGGCATTGCGCGTCACCGTGGCGGTGCATTCTATGGTAAatataaaaa > 1:3115893/1‑145 (MQ=255) gCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCa < 2:2327622/150‑1 (MQ=255) gCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCa < 1:913322/150‑1 (MQ=255) gCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGGTATCGG‑T‑GGCCCAAATGGTTAAGGCGGTCTGACTGGTAGTAAAATTATCTTTTTTAACTAACGCGGCAAGGCGCGGCACGGTGGCGGTGCATTATCTGGTAAAGATcaaaaa > 2:4138965/1‑145 (MQ=255) caccaAATTCTTCATCAACCCGACCGGTCGTGTCGTTAAAGG‑T‑GGCCCAAAGGGTGACTGCGGTCTGACTGGTCGTTAAAATAACGTTGATAACTACCGCGGCCTGGCGCCTCACCGGGGCGGTGGATTCTCAGGTAAAAATACATCaaa > 2:1216558/1‑150 (MQ=255) accaAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCaaaa < 2:2830176/150‑1 (MQ=255) caAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGt < 2:3555543/150‑1 (MQ=255) cttcATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCg < 2:4425757/150‑1 (MQ=255) catcaACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTc < 1:3603524/150‑1 (MQ=255) tcaACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCg < 2:2128947/150‑1 (MQ=255) tcaACCCGACCGGTCGTGTCGTTATAGG‑T‑GGCCCAAAGGGGGTCTGCGGTCTGACTGGTCGGAAAATTATCGTTGATAACAACGGCGGCATGGCGCGTCACGGTGGCGGGGGATTCGATGGTAAAAATAAATCAAAAGTGGACCCGTCCg > 2:428801/1‑150 (MQ=255) aaCCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCa < 1:2139577/150‑1 (MQ=255) ccGACCGGTCGTGTCGGTATAGG‑T‑GGCCCCAAGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTTATACCTACGGCGGCCAGGCGCGTCACGGTGGCGGTGCAATCACTGGTAAACATACCAAAAAAGTGGACCCTTCCCCAGcc > 2:1067777/1‑150 (MQ=255) cGACCGGTCGTTTCGTGATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCt < 1:2894273/150‑1 (MQ=255) gACCGGTCGTGTCGTTATCGG‑T‑TGCCCAATGGGTGACTGCGGTGTGACTGGTCGTAAAAATAAAGTTGATAACAAAGGCGGCAAGGCGCGTCACCGTGGCGGGGCAATCTCATGTAAATATACATAAAAAGTGGAACGGTACGCAGccaa > 2:1535912/1‑148 (MQ=255) ccGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACg < 1:1617868/150‑1 (MQ=255) ccGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACg < 1:1175453/150‑1 (MQ=255) ggTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgca < 2:3812432/150‑1 (MQ=255) gTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACgcag > 2:3650529/1‑150 (MQ=255) tttcgttATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACg > 2:1301773/1‑150 (MQ=255) tttcgttATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACg < 1:1518454/150‑1 (MQ=255) ttcgttATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACGt > 1:101444/1‑150 (MQ=255) | TCGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGG‑T‑GGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACGT > CP009273/3080606‑3080904 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |