| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,247,576 | C→T | 9.3% | intergenic (‑3/‑102) | yhaJ ← / → yhaK | LysR family putative transcriptional regulator/redox‑sensitive bicupin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,247,576 | 0 | C | T | 9.3% | 946.5 / 62.5 | 292 | intergenic (‑3/‑102) | yhaJ/yhaK | LysR family putative transcriptional regulator/redox‑sensitive bicupin |
| Reads supporting (aligned to +/- strand): ref base C (138/125); new base T (14/13); total (153/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01 | |||||||||||
Only 100 of 297 total aligned reads displayed.
CAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGA > CP009273/3247427‑3247725 | ctctTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGtt < 2:253662/150‑1 (MQ=255) tcttctTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTtc > 1:4645305/1‑150 (MQ=255) ttcttcCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTtctc > 1:3774805/1‑150 (MQ=255) ttcCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCAtt < 2:1681433/150‑1 (MQ=255) ttcCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCAtt > 2:3753943/1‑150 (MQ=255) ccAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCa < 1:2953967/150‑1 (MQ=255) ccAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCa < 1:1870975/150‑1 (MQ=255) gTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGa < 2:4675245/150‑1 (MQ=255) ttttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAACACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGaaa < 2:3084023/150‑1 (MQ=255) ttttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGaaa < 1:3984796/150‑1 (MQ=255) ttttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGaaa > 2:924304/1‑150 (MQ=255) tttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAAt > 1:3148077/1‑150 (MQ=255) tttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAAt < 1:1813127/150‑1 (MQ=255) tttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAAt < 1:714037/150‑1 (MQ=255) tttGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCGTTGGCCATTTCGTTCTCATTCAGGAAAt > 1:4048776/1‑150 (MQ=255) tGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAAttt > 1:1818613/1‑150 (MQ=255) tGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAAttt > 2:3523109/1‑150 (MQ=255) cATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGa < 2:3870546/150‑1 (MQ=255) cATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGa > 1:4010445/1‑150 (MQ=255) tGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAAc < 2:1898935/150‑1 (MQ=255) tgtAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATa > 1:1514387/1‑150 (MQ=255) tgtAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATa < 1:4542138/150‑1 (MQ=255) cTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCggg > 1:4261802/1‑150 (MQ=255) cTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATGTCGTTCTCATTCAGGAAATTTGAACATCCCggg > 1:2888728/1‑150 (MQ=255) tAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTGTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGc > 1:3833842/1‑150 (MQ=255) aaGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCa < 2:1993889/150‑1 (MQ=255) gCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAat < 2:1949994/150‑1 (MQ=255) gCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGc > 1:3654052/1‑150 (MQ=255) cACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCt > 2:4245374/1‑150 (MQ=255) gcgTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAAc < 1:4498576/150‑1 (MQ=255) gcgTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAAc < 2:1149239/150‑1 (MQ=255) cgTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACa < 2:2420381/150‑1 (MQ=255) cAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTa > 2:1578481/1‑150 (MQ=255) aGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAg > 1:4420639/1‑150 (MQ=255) gCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGc < 2:2558087/150‑1 (MQ=255) gCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGc < 2:180528/150‑1 (MQ=255) tCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGt < 1:786788/150‑1 (MQ=255) cATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCAGTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTc > 2:3327643/1‑150 (MQ=255) ccgccgccgccgCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAg > 2:1115982/1‑150 (MQ=255) ccgccgccgccgCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAg > 2:2259004/1‑150 (MQ=255) ccgccgccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGccc < 1:3848135/150‑1 (MQ=255) cgccgccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGcccc > 1:1686749/1‑150 (MQ=255) ccgccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCtt < 2:3954797/150‑1 (MQ=255) ccgccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCtt > 1:2657505/1‑150 (MQ=255) ccgccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCtt < 2:972879/150‑1 (MQ=255) gccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTAc > 2:1630859/1‑150 (MQ=255) gccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTAc < 2:2194839/150‑1 (MQ=255) ccgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTAcc > 1:1583092/1‑150 (MQ=255) cgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCa < 1:4103614/150‑1 (MQ=255) cgcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCa < 1:2774849/150‑1 (MQ=255) gcAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCAt > 1:3508079/1‑150 (MQ=255) cAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATa < 1:1078157/150‑1 (MQ=255) cAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATa > 1:1650256/1‑150 (MQ=255) aaaaCTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATaa > 1:860536/1‑150 (MQ=255) aaaaCTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATaa > 2:2038459/1‑150 (MQ=255) aaaaCTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATaa > 2:1629022/1‑150 (MQ=255) ccccGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAg > 1:656554/1‑150 (MQ=255) cccGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGt > 1:1284726/1‑150 (MQ=255) cGGCGATCGATCTCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGACATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCATCCCCTTACCATAAAAGGAAGTaa < 2:2663369/150‑1 (MQ=255) cGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTaa > 1:1001950/1‑150 (MQ=255) ggCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTaaa < 1:635473/150‑1 (MQ=255) cgatcgatCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAaga > 2:3795636/1‑150 (MQ=255) atcgatcgCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAagaga < 1:775471/150‑1 (MQ=255) atcgatcgCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAagaga < 2:3018586/150‑1 (MQ=255) tcgatcgCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAagagag < 1:4716685/150‑1 (MQ=255) gatcgCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGt > 2:755198/1‑150 (MQ=255) atcgCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTc > 2:1303850/1‑150 (MQ=255) tcgCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCa > 1:3694471/1‑150 (MQ=255) gCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAg < 1:2815542/150‑1 (MQ=255) tCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAAt < 1:494999/150‑1 (MQ=255) tCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAAt < 2:2804411/150‑1 (MQ=255) ccATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAAtt < 2:4546225/150‑1 (MQ=255) aaCCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGa > 1:981449/1‑150 (MQ=255) aaCCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGa < 1:414511/150‑1 (MQ=255) cccGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGAtt > 2:1372221/1‑150 (MQ=255) gTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATtact < 1:2134365/150‑1 (MQ=255) gTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATtact > 1:3461257/1‑150 (MQ=255) tAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATtacta > 1:3096076/1‑150 (MQ=255) aGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATtactac < 1:232013/150‑1 (MQ=255) gCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTTGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCg > 1:1048714/1‑150 (MQ=255) gCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCg > 1:1999585/1‑150 (MQ=255) cTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGa > 2:3420854/1‑150 (MQ=255) ttCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGaa < 2:491922/150‑1 (MQ=255) gCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAACGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGcc < 2:4137581/150‑1 (MQ=255) gTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAg < 2:1236610/150‑1 (MQ=255) ttAATGCCCTTTCTTTGGCCATTTAGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAgg < 1:3343289/150‑1 (MQ=255) aaTGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTAACCATAAAAGGAATTAAAGAGAGGTCAAGAATTATGATTACTACACGAACTGCCAGGCa > 1:1788106/1‑150 (MQ=255) tGCCCTTTCTTTGGCCATTTCGTTCTCATACAGGAAATTTGAACATACCTGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGACAAGAATTATGATTACTACCCGAACTGCCAGGCAgt > 2:4203356/1‑150 (MQ=255) tGCCCTTTCTTTGGCCATTTCGTTCTCATACAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGTTCAAGAATTATGATTACTACCCGAACTGCCAGGCAgt > 2:3792742/1‑150 (MQ=255) gCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAgtg < 1:4107588/150‑1 (MQ=255) ccTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGtgtg > 2:2131648/1‑150 (MQ=255) ccTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGtgtg > 2:4111900/1‑150 (MQ=255) tctttGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACa > 2:73310/1‑150 (MQ=255) tGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCa > 2:1173449/1‑150 (MQ=255) ggCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAg > 2:4337812/1‑150 (MQ=255) ggCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAg > 1:1624226/1‑150 (MQ=255) cATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACt < 1:1401937/150‑1 (MQ=255) aTTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTa > 1:1143825/1‑150 (MQ=255) ttCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACg > 1:3175969/1‑150 (MQ=255) cGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGa < 2:4450052/150‑1 (MQ=255) | CAGCTCTTCTTCCAGTTTTTGCATGGTGTAGCTAAGTGCGGAAGGCACGCGTCCCAGCTCATCCGCCGCCGCCGCAAAACTGCCCCGGCGATCGATCGCATCCATAACCCGTAGTGCTTCCAGCGTTAATGCCCTTTCTTTGGCCATTTCGTTCTCATTCAGGAAATTTGAACATACCGGGCAGAATATCTGGCTAACAATGTAGCGTCCAGCCCCTTACCATAAAAGGAAGTAAAGAGAGGTCAAGAATTATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGA > CP009273/3247427‑3247725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |