| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,602,383 | C→A | 16.6% | intergenic (‑27/‑194) | tusA ← / → yhhQ | mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase/DUF165 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,602,383 | 0 | C | A | 16.6% | 655.3 / 91.2 | 222 | intergenic (‑27/‑194) | tusA/yhhQ | mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase/DUF165 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (80/105); new base A (18/19); total (98/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 232 total aligned reads displayed.
AATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACGTGTCGTAC > CP009273/3602234‑3602532 | aTCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGgcg > 2:3377537/1‑150 (MQ=255) gCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAg > 1:2384559/1‑150 (MQ=255) aaCGTTTCGCCTGGCTGCATTTTGCGCACGTTTTTGCGCACCATCATCACGGGTTCCGGGCAGCGCTGGCCAAGCGCGTCGTGTGTGTGGTCTGGGCTGTAAATGATATCGTTAATTTTCTTATCATAACTTAAAAAAACGGCGCTAGtt < 2:3341675/150‑1 (MQ=255) tttCGCCAGGGTGCATATGGCGCACGGTTTTGCGCACCATCATCCCCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGTGTGTGGGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACg < 2:2499847/150‑1 (MQ=255) ttCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAATAAAACGGCGCTAGTTTACGc > 1:2335814/1‑150 (MQ=255) ccAGGCTGCATTTTGCGCACGGTTTTGCGCACCATCATCACGGGTTCGGGGCAGCGCTGGCCACGCGCGTCGTGTTTGTGGTCAGGGCTGTAAAATAGATGGGTATTTTTCTTCTCATCACTAAAAAAAACGGCGCTAGTTTACGCCCtg < 2:2826871/150‑1 (MQ=255) ccAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCtg > 1:2672579/1‑150 (MQ=255) gCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGATTACGCCCTGTGAg > 2:3824599/1‑150 (MQ=255) gCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAg > 2:2584763/1‑150 (MQ=255) cTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGt > 1:856793/1‑150 (MQ=255) tGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTc > 2:1027553/1‑150 (MQ=255) atatTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGt > 2:2449072/1‑150 (MQ=255) ttttGCGCACGGTTTTGCGCACCATCAGCACCGGTTCCGGGCAGCGCCGGCCACGCGCGTCGAGTGTGTGGTCCGGGCTGGAAAAGAGAGCGGTCATTTTCTTCTCAGCCCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTa < 1:3152272/148‑1 (MQ=255) tatTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTa > 2:1671585/1‑150 (MQ=255) ttGCGCACGGTTTTGCGCACCATCACCCCCGGTCCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGACATCGGACATTTTCTTCACAACACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAg < 2:3126605/150‑1 (MQ=255) cgcACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCaa < 2:1933379/150‑1 (MQ=255) caggtttttGCGCACAATCATCACGGGTGCCGGGCTGCGCAGGCCACGCGGGTGGTGTGTGTGTTCTGGGCTGTAAATGATATGGTTCATTTTCTTATCATCACTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAAc < 1:1776926/145‑1 (MQ=255) cGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATGGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTa < 2:3511960/150‑1 (MQ=255) ggTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCCCGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGGAAGCACACTAg > 1:1312488/1‑150 (MQ=255) tggcgcACAATCATCACGGGTTCCGGGCCGCGCTGGCCACGCGGGTGGTGTGTGTGGTCAGGGCTGTAAAAGAGATGGGTAATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTa < 1:3074494/148‑1 (MQ=255) tGCGCACCATCATCACGGGGTCGGGGCAGCGCTGGCCACGCGGGTCGTGTGTGTGGTCTGGGCTGTAAATGTGATGGGTCTTTTTATTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTaa < 1:1125939/150‑1 (MQ=255) gcgcACCATCATCCCGGGTTCGGGGCGGCGCCGGCAATGCGGGTCGTTTGTGTGGTCTGGGGTGTAAATGAGATCGGTCATTTTCTTCACATCAATTAAAAACACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAAc < 1:4519497/150‑1 (MQ=255) gcgcACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAAc < 2:1533336/150‑1 (MQ=255) cgcACCATCATCACCGGTTCCGGGCCGCGCCGGCCAAGCGCGTCGTTTTTGTGGTCAGGGGTGGAAAAGTCATCGGTCATTTTCTTCACATCCCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACg < 2:1808247/150‑1 (MQ=255) gcACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGa > 1:3273392/1‑150 (MQ=255) aCCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGAtt > 2:154819/1‑150 (MQ=255) aCCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGAtt < 2:2747614/150‑1 (MQ=255) aCCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGAtt > 2:4074023/1‑150 (MQ=255) aCCATCACCCCGGGTTCCGGGCTGCGCAGGCCACGCGCGTCGTGTGTGTGGTCTGGGCTGTAAAATAGATGGTTAATTTTCTTCTAAACAATAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGAtt < 1:134177/150‑1 (MQ=255) ccATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTg > 1:2670120/1‑150 (MQ=255) ccATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTg > 1:3659093/1‑150 (MQ=255) atcatcACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCg > 1:1173397/1‑150 (MQ=255) tcatcaCCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGt > 1:358637/1‑150 (MQ=255) tcatcaCCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGt < 2:532967/150‑1 (MQ=255) caCCGGTGCGGGGCAGCGCCGGCCAAGCGCGTCGTGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTAATTTTCTTATCATCAATTAAAAACACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGaaa < 1:286742/150‑1 (MQ=255) ccGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAAt < 1:707416/150‑1 (MQ=255) cGGTCCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTTTGGTCTGGGCTGTAAAAGAGATCGTTCATTTTCTTCTCATAAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAAtt < 2:83347/150‑1 (MQ=255) ggTTCCGGGCAGCGCAGGCCAAGCGCGTCGTGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTa < 2:1100787/150‑1 (MQ=255) tCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAAcc < 2:1872387/150‑1 (MQ=255) tCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGACAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAAcc > 1:108737/1‑150 (MQ=255) cgcgcAGGCCCTGGGCGTGGTGGGGGTGGTCTGGGCTGTAAATGTTTTGGGTATTTTTGTTCACATCACTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACcattgcat < 2:1173397/149‑1 (MQ=255) gcgcAGGCCACGCGGGTCGTGTGTGGGGTCCGGGCTGGAAAATAGATCGTTCATTTTCTCCTAAACACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACcattgcatt < 1:220586/150‑1 (MQ=255) cgcAGGCCACGCGCGTCGAGTGGGTGGTCAGGGCTGTAAAAGAGATCGTTCATTTTCTTCAAATCAATTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACcattgcattg < 1:966208/150‑1 (MQ=255) aaGCGCGTCGTGTGTGTGGTCTGGGGTGTAAAATAGATCGGTAATTTTCTTCTCATCACTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTa < 2:3251512/150‑1 (MQ=255) gcgcGTCGAGTGTGTGGTCTGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTaaa < 2:1970709/150‑1 (MQ=255) cgcgTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAg > 2:1998096/1‑150 (MQ=255) cgTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCa < 2:4320776/150‑1 (MQ=255) gTCGTGTGGGGGGTCTGGGCGGGAAAAGATATCGGTAATTTTCTTCACACCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAg < 1:4398322/150‑1 (MQ=255) ggtgtgtgtGGTCTGGGCTGGAAAAGATAGCGGTCTTTTTCTTCTCATCACTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTa < 1:1332857/147‑1 (MQ=255) tgtgGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATgc < 2:4614504/150‑1 (MQ=255) gtgGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATgcg > 2:2105268/1‑150 (MQ=255) gacAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATgcggcg < 2:1347312/148‑1 (MQ=255) gTCAGGGCTGTAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATgcggcg < 2:1347766/150‑1 (MQ=255) cAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCggcggc > 2:948330/1‑150 (MQ=255) aGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCt > 1:3021313/1‑150 (MQ=255) gggCTGTAAAAGAGATCGGTCATTTTCTTCTCATCACTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTc < 1:4625472/150‑1 (MQ=255) gggCTGGAAATGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTc < 2:3713471/150‑1 (MQ=255) gggCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTTCTTGAAAATTAACCATTGCATTGTCAACGTAAAGAAGTATAATGAGGCGGCTc > 2:2983409/1‑150 (MQ=255) tGGAAAAGAGATCGGTCATTTTCTTATCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACAATTGCATTGTCAACGTAAAGCAGTATAATTCGGCGGCTCGaaa > 2:4537856/1‑150 (MQ=255) ggAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGaaaa > 2:2400026/1‑150 (MQ=255) aaaGATATCGGTATTATTCTTATCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑g < 2:3999827/150‑1 (MQ=255) aaaGAGATCGGTCTTTTTCTTCTCATCAATTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑g < 2:539564/150‑1 (MQ=255) aaaGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGaaaaaaa > 2:2597998/1‑149 (MQ=255) aaaGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑g > 2:2391328/1‑150 (MQ=255) aaGAGATCGGTCATTTTCTTCACATCAATAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑gg < 2:3085127/150‑1 (MQ=255) tataTCGGTAATTTTCTTATCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGt < 1:4577632/147‑1 (MQ=255) gagaTCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGt < 2:1314340/150‑1 (MQ=255) gagaTCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGt < 2:4230220/150‑1 (MQ=255) gaTCGGTCATTTTCTTCGCATCAATTAAAAAAACGGCGCGAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTaa < 2:580852/150‑1 (MQ=255) aTCGGTCATTTTCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAg > 1:2259969/1‑150 (MQ=255) tCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATAATGCGGCGGCTCGAAAAAA‑GGGTAAGc > 1:407737/1‑150 (MQ=255) gTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACg < 2:2672579/150‑1 (MQ=255) aTTTTCTTCACATCACTTAAAAACACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGtta < 1:4153677/150‑1 (MQ=255) tttCTTCTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGttatt < 1:3562494/150‑1 (MQ=255) ttcttcTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGttatta > 1:2056154/1‑150 (MQ=255) ttcttcTCATCACTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGttatta > 1:2056188/1‑150 (MQ=255) tcatcaCTTAAAAAAACGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTaa < 2:158759/150‑1 (MQ=255) atcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAgg < 1:2676043/150‑1 (MQ=255) tcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGt < 2:2289761/150‑1 (MQ=255) tcaCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGt < 2:3632828/150‑1 (MQ=255) aaatAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAAGGGGTAAGCACGTTATTATGTTAAGGTa < 1:2583548/147‑1 (MQ=255) aCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTaa < 1:385450/150‑1 (MQ=255) aCTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTaa > 2:60716/1‑150 (MQ=255) aCTAAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTaa < 1:3377537/150‑1 (MQ=255) ctaaaaaacaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAAc < 1:520818/147‑1 (MQ=255) ataaaaaaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAAc < 1:2139922/147‑1 (MQ=255) taaaaaaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACa < 2:3427785/148‑1 (MQ=255) aaaaaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGa < 1:4505340/150‑1 (MQ=255) aaaaaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGa > 1:3330413/1‑150 (MQ=255) aaaaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGAc > 2:436282/1‑150 (MQ=255) aaaaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAAAAGAc > 2:4565400/1‑150 (MQ=255) aaaaaCGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACg > 1:1256399/1‑150 (MQ=255) aaaaCGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACgt < 2:78839/150‑1 (MQ=255) aaaaCGGCGCTAGATTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAATATTAACCATGGCTTTGTAAACGTATAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACgt < 2:79354/150‑1 (MQ=255) aaaaCGGAGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACgt < 2:3579556/150‑1 (MQ=255) aaCGGCACTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑TGGTAAGCACGTTATTATTTTAATTTAACAGAAgttt > 2:854574/1‑148 (MQ=255) cGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACGTGTcg < 2:2167537/150‑1 (MQ=255) cgcTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGTTAACAGACGTGTcgtac > 2:2374253/1‑150 (MQ=255) cgcTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACGTGTcgtac > 2:2198384/1‑150 (MQ=255) cgcTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACGTGTcgtac > 2:2372988/1‑150 (MQ=255) | AATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGTCGAGTGTGTGGTCAGGGCTGGAAAAGAGATCGGTCATTTTCTTCTCATCACTTAAAAAAACGGCGCTAGTTTACGCCCTGTGAGTCCGTAAGCAAACTAGGTTAACGATTGCGTGAAAATTAACCATTGCATTGTCAACGTAAAGCAGTATCATGCGGCGGCTCGAAAAAA‑GGGTAAGCACGTTATTATGTTAAGGTAACAGACGTGTCGTAC > CP009273/3602234‑3602532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |