BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,822,339	A→C	14.4%	Q12P (CAA→CCA) ‡	xanP →	xanthine permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,822,339	0	A	C	14.4%	401.5 / 10.7	212	Q12P (CAA→CCA) ‡	xanP	xanthine permease
Reads supporting (aligned to +/- strand): ref base A (115/59); new base C (32/5); total (148/64)
Fisher's exact test for biased strand distribution p-value = 1.72e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 214 total aligned reads displayed.

ATATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCT  >  CP009273/3822191‑3822486

 tataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAAc                                                                                                                                                   >  2:4351363/1‑150 (MQ=255)

  ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAccc                                                                                                                                                  >  2:367610/1‑150 (MQ=255)

  ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGAGGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAAcc                                                                                                                                                  >  2:1720652/1‑150 (MQ=255)

    aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCgg                                                                                                                                                >  1:1567228/1‑150 (MQ=255)

    aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCgg                                                                                                                                                >  1:1972452/1‑150 (MQ=255)

     aaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTATCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGAGGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGt                                                                                                                                               >  2:4095993/1‑150 (MQ=255)

      aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGtt                                                                                                                                              <  1:1099062/150‑1 (MQ=255)

       aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTg                                                                                                                                             >  1:4304883/1‑150 (MQ=255)

         aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCAACGGTTgcg                                                                                                                                           >  1:3450672/1‑150 (MQ=255)

              aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGTTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGTTTGCGCAGAc                                                                                                                                      <  2:834977/150‑1 (MQ=255)

              aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAAACCGTTGCGCacac                                                                                                                                      >  1:2262789/1‑150 (MQ=255)

               tttATCTCTTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGATAAAATGCCCGCTTTGCTACCAGGGTATTGTTTTCGATTTCTGTTTCCACCCTCTAGTCAGAAAATGCG‑CAACCGTTTGCGCAGACt                                                                                                                                     <  2:1336356/150‑1 (MQ=255)

                 tATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGGTGCGCAGAcaca                                                                                                                                   >  1:3810061/1‑150 (MQ=255)

                 tATCTAATTTAAATATTTAGATGAGTATTTGGCAAACTTTTGCTTTTCTCTTTCGGTCAGATAAAATGCCCGCTTTGCTACCACGGTATTGTTTTCTATGTCTGTTTCCACCATCGAGTCAGAAATTGCG‑CAACCGGTTGCGCAGACTCa                                                                                                                                   <  2:2951609/150‑1 (MQ=255)

                 aaTCTCATTTAAATTTTTAGATGTGGATGTGGCAAAGGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCGGCTTTGCTACCCCGGGATTTTTTACGATGTCTGTTTCCACCCTCTAGTCAGAAAATGCG‑CAACGGGTTGCCCAGACTCa                                                                                                                                   <  2:2671096/149‑1 (MQ=255)

                   tctaATTTAAATATTTAGTTGTGTATGTGGCAAACGTTTGCTTTTCTGTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCAGGGGATTTTTTTCGATGTCTGTTTCCACCCTCGAGTCATAAAATGCG‑CAACCGGTTGCGCAGACTCaaa                                                                                                                                 <  2:3288218/150‑1 (MQ=255)

                    ctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCCGTTGCGCAGACTCaaaa                                                                                                                                >  1:3137511/1‑150 (MQ=255)

                        tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCCCCGGGTGCGCAGACTCAAAACAGc                                                                                                                            >  2:4051019/1‑150 (MQ=255)

                        tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTGCGCAGACACAAAAAAGc                                                                                                                            >  2:1212618/1‑150 (MQ=255)

                          tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCAACGGTTGCGCAGACTCAAAACAGCGa                                                                                                                          >  1:1141166/1‑150 (MQ=255)

                          tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCACTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTGTTCGAAGTCTGTTTCCACCCTCGACTCAGAAAATGAGCCAAACGGTT‑CGCAGACTCACAAAAGcca                                                                                                                          >  1:1269586/1‑148 (MQ=255)

                            aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTAAAAACAGCGAAc                                                                                                                        >  2:580648/1‑150 (MQ=255)

                               atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACTCAAAACAGCGAACTGa                                                                                                                     >  2:3816647/1‑150 (MQ=255)

                                tttAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACAGAt                                                                                                                    >  2:4017024/1‑150 (MQ=255)

                                 ttAGATGAGGATGTGGCAAACGTTTGATTTACTCTTTCGGACAGCTAAAATGCCCGCTTTGCTACCACGGCATTGTTTTAGCTGTATGTTGCCACCCTCGCGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGAtt                                                                                                                   <  2:2422483/150‑1 (MQ=255)

                                  tAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGAttt                                                                                                                  >  1:1815416/1‑150 (MQ=255)

                                  tAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGCGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATTCG‑CAACCCGTTGCGCACAAAAAAAAAAACGAACAGAttt                                                                                                                  >  1:2502772/1‑150 (MQ=255)

                                      tGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTTCGCAGACTCAAAACAGAGAACAGATTTaaag                                                                                                              >  2:3965182/1‑147 (MQ=255)

                                        aGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTc                                                                                                            >  2:1625069/1‑150 (MQ=255)

                                         ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGTTTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑AAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCt                                                                                                           <  2:4610575/150‑1 (MQ=255)

                                            tgtgGCAAACGTTTGCTTTTCTCTTTCGGTCTGATAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGa                                                                                                        <  2:1415917/150‑1 (MQ=255)

                                             gtgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCCGTTTCGCAGAAAAAAAACAGCGAAATGATTTAAAGTCTTTaa                                                                                                       >  1:3813158/1‑150 (MQ=255)

                                               ggCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGATTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCCCCCTCGAGTCAGAAAATGCG‑AAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGa                                                                                                     <  2:4299034/150‑1 (MQ=255)

                                                     cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCTAGTCATAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTcc                                                                                               <  2:3770493/150‑1 (MQ=255)

                                                     cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTcc                                                                                               >  2:3134741/1‑150 (MQ=255)

                                                     cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTGTTCGATGTCTGTTTCCACCCTCGAGCCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTcc                                                                                               <  2:2687934/150‑1 (MQ=255)

                                                      gTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccg                                                                                              >  2:4243693/1‑150 (MQ=255)

                                                       tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAATATCGTacgc                                                                                             >  1:400256/1‑150 (MQ=255)

                                                        ttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGTATATAGTccgcc                                                                                            >  2:3546116/1‑150 (MQ=255)

                                                         tGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTccgccg                                                                                           >  2:1230466/1‑150 (MQ=255)

                                                           cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTTCGCAGACACAAAAAAGCGAACAGATTTACCGTCATTAATATAGTCCCCCCCt                                                                                         >  1:3720272/1‑150 (MQ=255)

                                                             tttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGGTGCGCAGACTCAAAAAACCCAACAGATTTAACGGCTTGAAGATCGTCCGCCGCGTc                                                                                       >  1:651159/1‑150 (MQ=255)

                                                             tttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTGCGCCGACTCAAAAAACCGAAAAGATTTAAACTCTTGAAGATCGTCCGCCGCGTc                                                                                       >  1:650782/1‑150 (MQ=255)

                                                              ttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGGTGCGCAGACTCAAAACAGCGAACAGATTTAACGTCTTGAAGATAGTCCGCCGCTTcc                                                                                      >  1:4755321/1‑150 (MQ=255)

                                                                      cGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAccc                                                                              >  2:1861747/1‑150 (MQ=255)

                                                                       ggTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCt                                                                             >  2:2646665/1‑150 (MQ=255)

                                                                        gTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCACAAACCCTg                                                                            >  2:1100855/1‑150 (MQ=255)

                                                                         tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCCGACTCAAAACAGCGAACAGAGTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCGGt                                                                           >  1:2313829/1‑150 (MQ=255)

                                                                          cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCCGTTGCGCAGACACAAAACAGCGAACGGAGTTACCCTCTTGAAGATCGTCCGCCCCATCCACAAACCCAGtt                                                                          >  1:1892358/1‑150 (MQ=255)

                                                                          cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGCTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACTCAAAAAAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                          >  1:2754014/1‑150 (MQ=255)

                                                                           aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTTCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGttt                                                                         >  2:4407525/1‑150 (MQ=255)

                                                                             cTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCA‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgc                                                                       >  1:4526639/1‑150 (MQ=255)

                                                                              tAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACACAAAAAAGCGACCTGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCACAAAACCAGGTTgcc                                                                      >  1:2606087/1‑150 (MQ=255)

                                                                                aaaTGCCCGCTTTGCTACCACGGGTTTGTTTTCGATGTCTGTTACCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgc                                                                    <  2:4721436/150‑1 (MQ=255)

                                                                                aaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGGTGCGCAGAAACAAAAAAGCGAACAGATTTTACGTCTTGAATATAGTCCGCCCCGTCCTCAAAACCAGttttgcgc                                                                    >  1:2122733/1‑145 (MQ=255)

                                                                                 aaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTgccgcc                                                                   >  2:3398139/1‑150 (MQ=255)

                                                                                  aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCCGTTGCGCAGACTCAAAAAAGCGAAATGATTTAACGTCTTGAAGATCGTCCGCCCCATCCTCAAACCCAGTTTggcgccg                                                                  >  1:717263/1‑149 (MQ=255)

                                                                                   tGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTGCGCACAAGAAAAACACCCTACGTATTTAAAGTCTTGAATATAGTCAGCCGCTTCCTCAAACCCAGGTTTCCGCCTg                                                                 >  2:2388192/1‑150 (MQ=255)

                                                                                     ccggCTTTGCTACCTGGGGTTTGTTTGGGTTGTGTGTTGCCCCCCTCGTGTCAGAAATGGCG‑CCCCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTc                                                               <  1:333501/147‑1 (MQ=255)

                                                                                      ccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCCCCGGGTGCGCCCACTCAAAAAACCGAACTGATTTAACGTCATTAAGATAGTCCGCCCCTTCCACAAACCCTGTTTGCCGCCTGTCa                                                              >  1:2994028/1‑150 (MQ=255)

                                                                                      ccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCCCCCGGTTCGCAGACTCAAAACAACGAACAGATTTACCGTCTTGAATATAGTCCGCCGCATCCACAAACCCCGTTTGGCGCCGGTCa                                                              >  1:503375/1‑150 (MQ=255)

                                                                                      ccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACACAAAACAGCGAACTGATTTAACGTCTTGAATATAGTCCGCCGCATCCTCAAACCCAGTTTTCCGCCTGTCa                                                              >  1:793480/1‑150 (MQ=255)

                                                                                      ccGCTTTGCTACCACGGGATTGGTTTCGATGTCTGTGTCCACCCTCGTGGCAGAAAATGCG‑CACCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCa                                                              <  2:691246/150‑1 (MQ=255)

                                                                                       cGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGAATCAAAAAAGCGAACTGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCACAAAACCGGTTTGCCGCCTGTCAg                                                             >  1:1475787/1‑150 (MQ=255)

                                                                                          tttGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCCGACTCAAAACACCGCACGGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCACAAACCCTGGTTTCCGCCTGTCAGcct                                                          >  1:3116809/1‑148 (MQ=255)

                                                                                           ttGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGG‑CCACCCGTTGCGCCGACACAAAACACCCAACAGAGTTAACGGCGTTATGATCTTACGCCGCGTCCTCCAAACCAGGTTGGCGCCGGTCCGCaac                                                         >  1:2398895/1‑148 (MQ=255)

                                                                                           tggCTACCCCGGGATTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATc                                                         <  2:3015958/148‑1 (MQ=255)

                                                                                                aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgctg                                                    >  2:1523175/1‑150 (MQ=255)

                                                                                                aCCACGGGATTGTTTTCGAGGTCTGGTTCCACCCTCGAGGCAGAAAATGCG‑CAACCGGGTGCGCAGACGCAAAACAGCGCACTGGTTTACCGGCTTGTAGCTCGTCCGCCGCGTCCGCCAACCCTGGTTGCCGCCTGTCCGCCTctgctg                                                    >  2:3612270/1‑150 (MQ=255)

                                                                                                  cACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCCGGTGCGCAGACACAAAAAAGCGAACAGATTTAAAGGCTTTAAGATAGTCCGCCGCGTCCACAAACCCAGGTTGCCGCCAGTCAGCATCAGCAGGc                                                  >  1:138291/1‑150 (MQ=255)

                                                                                                  cACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGc                                                  >  2:2061547/1‑150 (MQ=255)

                                                                                                       gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTTCGCAGACACAAAACAGCGAACTGATTTAACGTCTTTAAGATCGTCCGCCGCTTCCACAAAACCTGTTTGCCGCCTGTCCGCATCTGCGGGCGATGt                                             >  2:542112/1‑150 (MQ=255)

                                                                                                       gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAATATCGTCCGCCGCTTCCTCAAACACTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                             >  2:2879892/1‑150 (MQ=255)

                                                                                                         ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTc                                           <  2:4134715/150‑1 (MQ=255)

                                                                                                         ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACACAAAAAAGCGAACAGATTTACACTATTGAAGATAGTACGCCGCTTACTCAAACCCAGTTTGGCGCCTGTCAGCAACAGCTGGCGATGTTc                                           >  1:2335501/1‑150 (MQ=255)

                                                                                                          ttttttGGTTGTCTGTTACCCCCCTCGAGTCATAAACTCCG‑CCCCGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCg                                          <  1:3283884/148‑1 (MQ=255)

                                                                                                           gTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGt                                         >  2:507749/1‑150 (MQ=255)

                                                                                                            ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGtt                                        <  2:1567228/150‑1 (MQ=255)

                                                                                                            ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTAACGTCTTGAAGATAGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCAGTCAGCATCTGCTGGCGATGTTAGtt                                        >  2:1312037/1‑150 (MQ=255)

                                                                                                            ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGCTGTTCGtt                                        >  2:199642/1‑150 (MQ=255)

                                                                                                             tttCGTTTTTTGTTTCCACCCTCGATTCAGAAAATGCC‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTg                                       <  1:1104874/150‑1 (MQ=255)

                                                                                                               tCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACACAAAACAGCGAAATGATTTTCCGTCTTGAAGATAGTCCGCCGCATACTCAAACACGGTTTGCCGCCTGTCAGCATATTCTGGCGATGTTCGTTGCg                                     >  2:2817406/1‑150 (MQ=255)

                                                                                                                cGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACTCAAAAAAGCGAACAGATTTACCGTCTTGTAGATCGTCCGCCGCTTCCTCAAAACCTGTTTTCCGCCAGTCAGCATCTGCTGGCGCTGTTCGTTGCgg                                    >  2:2612922/1‑150 (MQ=255)

                                                                                                                cGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                                    >  2:2169678/1‑150 (MQ=255)

                                                                                                                 gATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTTAATATAGTACCCCGCTTCCTCAAAACCAGTTTTCCGCCTGTCAGCATATGCTGGCGATGTTAGTTGCGGt                                   >  1:4240929/1‑150 (MQ=255)

                                                                                                                  ttGTCTGTTTCCACCCTCGAGTCATAAACTCCG‑CAACCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTg                                  <  1:766088/149‑1 (MQ=255)

                                                                                                                   tGTCTGTTACCCCCCTCGTGTCATAAATGGCG‑CACCCGGTCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGa                                 <  1:1720681/150‑1 (MQ=255)

                                                                                                                        gTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCAGTTTTCCGCCAGTCAGCATATGCTGGCGATGTTCGTTGCGGTGATCACg                            >  2:1224044/1‑150 (MQ=255)

                                                                                                                          ttCCACCCTCGAGTCAGAAATGGCC‑CACCGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGcc                          <  1:1041875/150‑1 (MQ=255)

                                                                                                                             cACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGGTTGCCGCCAGTCAGCATCAGCTGGCGATGTTCGTTGCGGTGATCACGCCAgc                       >  2:4231842/1‑150 (MQ=255)

                                                                                                                              aCCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGAATCAAAAAAGCGAACTTATTTAACGTCTTTAATATCTTCCGCCGCTTCCACAAAAACAGTTTTCCGCCTTTAATCATAATATGGCGATTTTCGTTTGGGTTATAACGCCAacg                      >  1:3560232/1‑150 (MQ=255)

                                                                                                                                 cTCGAGACACAAAAGGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGATTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                   <  2:3006492/150‑1 (MQ=255)

                                                                                                                                        cAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt            <  2:4755321/150‑1 (MQ=255)

                                                                                                                                        cAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTTAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGGTTCGGTGATCACGCCAGCGCTATTAATCt            >  2:1849805/1‑150 (MQ=255)

                                                                                                                                            aaaTGCG‑CCACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa        <  2:2262789/150‑1 (MQ=255)

                                                                                                                                            aaaTGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa        >  2:1792412/1‑150 (MQ=255)

                                                                                                                                             aaTGCG‑CAAACGGTTGCGCATACTAAAAACAGCGAACAGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCAGCCAGTCAGCAACTGCTTGAGATGTTCGTTTAGGTGATAAAGCCACCGCTATTAATCTGCCat       >  2:2285917/1‑149 (MQ=255)

                                                                                                                                                 cg‑cAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGgcgc   >  1:220400/1‑150 (MQ=255)

                                                                                                                                                  g‑cAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCt  <  2:1972425/150‑1 (MQ=255)

                                                                                                                                                  g‑cAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCt  >  1:2845612/1‑150 (MQ=255)

ATATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCT  >  CP009273/3822191‑3822486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`