| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,870,977 | T→A | 8.0% | intergenic (‑152/+88) | yidB ← / ← gyrB | DUF937 family protein/DNA gyrase, subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,870,977 | 0 | T | A | 8.0% | 697.5 / 8.1 | 243 | intergenic (‑152/+88) | yidB/gyrB | DUF937 family protein/DNA gyrase, subunit B |
| Reads supporting (aligned to +/- strand): ref base T (144/74); new base A (8/16); total (153/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 248 total aligned reads displayed.
ATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAA > CP009273/3870827‑3871126 | tAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt < 1:3026940/150‑1 (MQ=255) aaTCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa > 2:2867280/1‑150 (MQ=255) aaTCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa > 2:4550043/1‑150 (MQ=255) ccTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaa < 2:2294617/150‑1 (MQ=255) ccTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaa < 2:3916936/150‑1 (MQ=255) cTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAt < 2:890729/150‑1 (MQ=255) tGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATc < 2:4710754/150‑1 (MQ=255) tGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATc < 2:4404460/150‑1 (MQ=255) tAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCAt > 2:1014787/1‑150 (MQ=255) aaaGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATg < 1:3566273/150‑1 (MQ=255) aaGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGa > 1:2196862/1‑150 (MQ=255) gTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAt > 2:1209336/1‑150 (MQ=255) ttACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAtt < 2:4166824/150‑1 (MQ=255) aCGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATCATTGCGGATTGCAGAAATAATATGGGCGGAGATGATCTCCGCGCTTTTCTTATAGCTTCTTGCCGGATGCGGGGTGAACGCCTTATCCGGCCGACAAAATCATGAAAATTCa > 2:4363063/1‑150 (MQ=255) gtgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATTCGGCGTGAACGCCTTATCCGGCCTACACAATCATTAAaaataaat > 1:428160/1‑150 (MQ=39) tgtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATa > 1:1611247/1‑150 (MQ=255) tGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAt > 2:364021/1‑150 (MQ=255) gACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACAAAATCATTAAAATTCAATACAtt > 1:1262977/1‑150 (MQ=255) aCCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGTTCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTg < 1:3368232/150‑1 (MQ=255) aCCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTg < 2:1285567/150‑1 (MQ=255) ccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCa < 2:3726079/150‑1 (MQ=255) aaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAATGCAAGAtt > 1:1419654/1‑150 (MQ=255) aGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt < 2:1849404/150‑1 (MQ=255) aGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt > 2:576524/1‑150 (MQ=255) gTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtttt < 1:99473/150‑1 (MQ=255) gTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtttt < 1:1365647/150‑1 (MQ=255) tataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATTAAAATTCAATACATTTAAAGATTTTc > 1:2405669/1‑150 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCg < 2:1046538/150‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCg < 2:2064984/150‑1 (MQ=255) taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGt > 2:2202340/1‑150 (MQ=255) aGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa > 2:3409605/1‑150 (MQ=255) gATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAg < 1:2117715/150‑1 (MQ=255) gCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTg > 2:773006/1‑150 (MQ=255) cGGGATGATAATTGCGGATTGCAGAAATAAAATGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTAGTAGGCCTGa > 1:4052226/1‑150 (MQ=255) cGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATAAATTGCAAGATTTTCGTATGCCTGa > 1:2655193/1‑150 (MQ=255) gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAt > 1:4159707/1‑150 (MQ=255) gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAt > 1:3951911/1‑150 (MQ=255) atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAACTCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAg < 1:3065760/150‑1 (MQ=255) gatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCg > 2:1596446/1‑150 (MQ=255) atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGt > 2:4248396/1‑150 (MQ=255) atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCAACAAAATCATGAAAAATCAAAACATTTCAAGATTTTCGTAGGCCTGATAAGCGt > 1:4002350/1‑150 (MQ=255) atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACAAAATCATGAAAATTAAATACATTGCAAGATTTTCGTTGGCCTGATAAGCGt > 1:4002151/1‑150 (MQ=255) tGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgcgc < 1:365185/150‑1 (MQ=255) tGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgcgc < 2:648333/150‑1 (MQ=255) aTTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCTAGATTTTCGTAGGCCTGATAAGCGTAGCGcagcag > 2:4714833/1‑150 (MQ=255) cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAc < 1:2145753/150‑1 (MQ=255) gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGc > 1:1929918/1‑150 (MQ=255) gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGc > 1:1929399/1‑150 (MQ=255) aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGGCGGATGCGGCGTGAACCCCCTATCCGGCCTACAAAAACAATAAAAATAAAAAAATTTCAAGATTTTAGTTGGCCGGATAAGCGTAGCGCAACAGGCACCCTCGCATg > 1:811119/1‑150 (MQ=255) aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCCAGATTTTCGTAGGCCTGATAAGCGTCGCGCATCAGGCACGCTCGCATg > 2:3254794/1‑150 (MQ=255) aGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGt > 2:2461345/1‑150 (MQ=255) ggccgtagagGATCCCGGCCCGTTTCTTAGCGCTTGGTCCCGGCTGCGGCGTGAACGCCTTATCCGGCAAACAAAATCAGCAAAATTCAATCCATCGCAAGTTTTGCGTAGGCCTGATAAGCGTTGCGCAACAGGCACGCTCGCATGGtt < 2:2822624/144‑1 (MQ=12) gCGGAGATGATCTCCGCCCTTTTCTTATCGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAATCAATCCATTGCAAGATGTTCGTAGGCCTGATAAGCGTAGCGCAGCAGGCACGCTCGCAGGGTTAg > 2:3447147/1‑150 (MQ=25) cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgc > 1:2116008/1‑150 (MQ=255) ggAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCGGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg < 2:2748645/150‑1 (MQ=255) ggAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTTCAAGATTTTCGTAGGCCTGATAATCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg > 1:3498867/1‑150 (MQ=255) agaTGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTATGCCTGATAAGCGTAGAGCATCAGGCACGCTAGCATGGTTAGCGcc > 2:91766/1‑150 (MQ=255) agaTGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGcc > 2:4586606/1‑150 (MQ=255) agaTGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGcc > 1:4663527/1‑150 (MQ=255) gatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCAACAAAATAATGAAAATTCAATACATTTCAAGATTTTCGTAGGCCTGATAAGAGTAGCGCATAAGGCACGCTCGCATGGTTATCGCCATTa > 1:3383058/1‑150 (MQ=25) tctcCGCCCTTTTCTTATAGATTCTTGCCGGATGCGGCGTGAACGCATTATCCGGCATACAAAATCCTCAAAATTCAATACATTGCAAGTTTTTCTTAGGCCTGATAAGCTTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTaaa < 2:2433874/150‑1 (MQ=25) tcCGCCCTTTTCTTATAGCTTCTTGCCCGATGCGGCGTGAAAGCCATATACGGCCAACAAAAACAAGAAAATTAAAAAAATTTCAACATTTTCGTATGCCTGATAAACGTAGAGCATCAGGCACCCACGCAGGGTTATCGCCATTAAata > 1:3264147/1‑150 (MQ=255) ccGCCCTTTTCTTATAGATACTGGCCGGATGCGGCGTCAACGCATTATCCGCCCAAAAAAAACTTTAAAATTAAAACCATTCCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAatat < 2:18603/150‑1 (MQ=21) gCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTTAACGCCTTACCCGGCATACAAAATAATGAAAATTCAATACATTGCAAGATTTTCTTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCg < 2:1005656/150‑1 (MQ=25) gCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAATCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCg > 1:346880/1‑150 (MQ=255) gCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACAAAATCATGAAAATTAAATAAAATTCAAGATTTTCGTATGCCTGATAAGCGTATCGCATCAGGCACGCTCGCAAGGTTTGCGCCCATAAATATca > 1:2807239/1‑149 (MQ=21) ccTTTTATTATTGCTTGTGGCCGGTTGGGGCGTGAACGCCTTTTCCGGCATAAAAAATCATTAAAATTAAATACTTTGCAATTTTTTGTTAGGCCTTATAAGGGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGat < 1:1826166/150‑1 (MQ=255) cTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGata > 2:2387335/1‑150 (MQ=255) cTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCAACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGata > 1:1490647/1‑150 (MQ=255) ttttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATAATTAAAATTAAATACATTGCAAGATTTTAGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCAATAAATATCTatat > 1:4512961/1‑150 (MQ=25) ttttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAAAAAATCATTAAAATTAAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGAGCATCAGGCACGCTCGCAAGGTTAGCGCCATAAAATATCGatat > 1:4512663/1‑150 (MQ=25) tttCTTATTGCTTCTGGCGGGTTGCGGCGTTAACGCCTTATCCGGCCTAAAAAATCATGAAAATTCAATACATTGCATTTTTTTCTTAGGCCTTTTAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGatagt < 1:2662280/150‑3 (MQ=21) ttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTc > 1:2287117/1‑150 (MQ=255) cTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCATATACGGCCAAAAAAATAAAGAAAAATCAAAACATTTCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCAACAGGCACGCTCGCAAGGTTAGCGCCAATAAATATAGATATTcgc > 1:3739056/1‑150 (MQ=25) ttATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCGCGCATGGTTAGCGCCCTTAAATATCGATATTcgcc > 2:30253/1‑150 (MQ=255) tataGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgccg > 2:577102/1‑150 (MQ=255) aGCTTGTTGCCGGTTGCGGCTTGAACGCCTTATCCGGCCTAAAAAATCATGAAAATAAAATACATTGCAATTTTTTGGTAGGCCTTATAAGCTTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCtt < 1:2291442/150‑1 (MQ=255) gCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCttt > 1:2967053/1‑150 (MQ=255) gCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCttt < 2:654171/150‑1 (MQ=255) cttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCAGGGTTAGCGCCATTAAATAGCGATATTCGCCGCGTTc > 2:3930884/1‑150 (MQ=255) cttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTAAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAgg < 2:2196862/150‑1 (MQ=255) ttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAggg > 1:674795/1‑150 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGc > 1:2844648/1‑150 (MQ=255) tGCCGGATGCGGCGTGAACGCCTTATCCGGCATACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGc < 2:1931043/150‑1 (MQ=255) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGt > 1:3577873/1‑150 (MQ=255) cGGATGCGGCGTTAACGCCTAATCCGCCAAAAAAAATCATTAAAATTCAAACCTTTGCATTATTTTCGTAGGCATGATAAGCGTAGCGAATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGtt < 1:1014787/150‑1 (MQ=255) ggATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtc > 2:4039776/1‑150 (MQ=255) gTGAACGCCTTCGCCGGCCTCCCAACGCCTGAAACTTCAATACAGTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTTCTCTTCAATa < 2:2903928/150‑1 (MQ=37) tGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATaa > 1:1847724/1‑150 (MQ=255) gAACGCCTTATCCGGCCTACAAAATCATGAAAATTCATTACATTGAAAGATTTTCGTAGGCCTGATATGCTTAGCGCATATGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATaaa < 2:1339290/150‑1 (MQ=38) gAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATaaa > 1:3681794/1‑150 (MQ=255) gAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGGTCTCTTCAATaaa > 1:3873009/1‑150 (MQ=255) aCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCTTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACg < 2:659639/150‑1 (MQ=255) ccTTATCCGGCCAACAAAATCATGAAAATCCAATACATGGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCAc < 2:3670354/150‑1 (MQ=255) cTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACg > 1:1350549/1‑150 (MQ=255) cTTAACCGGCAAACAAAATATTAAAAATTCAATCCATTGAAATATTTTCGTTGGCCTTATAAGCGTAGCGAATCCGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACg < 1:2535286/150‑1 (MQ=255) ttATCCGGCCTAAAAAATCATGAAAATTCAATACATTGCAATTTTTTCGTTGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACgg < 2:1766416/150‑1 (MQ=255) ccGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGcgcg > 2:340054/1‑150 (MQ=255) tACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCaa > 1:509399/1‑150 (MQ=255) tACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCaa > 1:3107999/1‑150 (MQ=255) | ATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAA > CP009273/3870827‑3871126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |