| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,904,487 | G→T | 21.7% | I133I (ATC→ATA) | pstS ← | periplasmic phosphate binding protein, high‑affinity |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,904,487 | 0 | G | T | 21.7% | 761.8 / 170.4 | 290 | I133I (ATC→ATA) | pstS | periplasmic phosphate binding protein, high‑affinity |
| Reads supporting (aligned to +/- strand): ref base G (117/110); new base T (29/34); total (146/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 295 total aligned reads displayed.
TTTTTCCACTCTTCGTTCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCAGACAG > CP009273/3904338‑3904636 | tttCCACTCTTCGTTCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGAt < 1:2145988/150‑1 (MQ=255) ttCCACTCTTCGTTCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGAtt < 1:3505460/150‑1 (MQ=255) gTTCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTa < 2:2384389/150‑1 (MQ=255) gTTCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTGTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTa > 2:4009886/1‑150 (MQ=255) tCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGa > 1:4598443/1‑150 (MQ=255) tCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGa > 1:1667456/1‑150 (MQ=255) cACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCCTCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCCGGTAGAt > 1:4503775/1‑150 (MQ=255) cACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGAt < 1:3744844/150‑1 (MQ=255) aCTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATg < 2:696091/150‑1 (MQ=255) ttCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCg > 1:1993577/1‑150 (MQ=255) ttCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCg < 1:255594/150‑1 (MQ=255) ttCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCg < 2:2739084/150‑1 (MQ=255) ttCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCg < 2:3916606/150‑1 (MQ=255) ttCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCg > 1:2873941/1‑150 (MQ=255) tCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGc < 2:3289575/150‑1 (MQ=255) aGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAgg < 1:3004198/150‑1 (MQ=255) cTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTa > 2:2128086/1‑150 (MQ=255) cTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTa > 2:25806/1‑150 (MQ=255) cTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTa < 1:1262514/150‑1 (MQ=255) tGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTAc < 2:4164667/150‑1 (MQ=255) ggTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTAcc < 1:1722806/150‑1 (MQ=255) ggTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTAcc < 2:73220/150‑1 (MQ=255) gTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCa < 1:3877512/150‑1 (MQ=255) gTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCa > 1:3084694/1‑150 (MQ=255) gAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATc > 1:2724621/1‑150 (MQ=255) aaGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATcc < 1:1205384/150‑1 (MQ=255) cGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCa < 1:2352760/150‑1 (MQ=255) aaggaagTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCAcc < 2:1297505/150‑1 (MQ=255) ggaagTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAg < 1:1506919/150‑1 (MQ=255) gaagTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGt < 2:474737/150‑1 (MQ=255) gaagTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGt < 1:3526268/150‑1 (MQ=255) gaagTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGt < 2:900664/150‑1 (MQ=255) tCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGc > 1:1101656/1‑150 (MQ=255) tCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGc > 1:3382446/1‑150 (MQ=255) ggAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGa > 1:874204/1‑150 (MQ=255) gCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACtt < 1:1429185/150‑1 (MQ=255) ccATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTc < 2:1667456/150‑1 (MQ=255) ccATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTc < 2:3597184/150‑1 (MQ=255) cATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCa < 2:3822238/150‑1 (MQ=255) aTCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAg < 2:3760945/150‑1 (MQ=255) aTCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAg > 1:4165738/1‑150 (MQ=255) cTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGcc > 1:2602937/1‑150 (MQ=255) cgcgGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTg > 1:1529/1‑150 (MQ=255) cgcgGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTg > 1:1584183/1‑150 (MQ=255) cgcgGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTg > 2:785097/1‑150 (MQ=255) gcgTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAAt < 2:3045044/150‑1 (MQ=255) cgTACTACAGCAATGTTTTGTGAAGGCCGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATg > 2:1549565/1‑150 (MQ=255) cgTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATg < 2:4377615/150‑1 (MQ=255) actacAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTa < 2:629435/150‑1 (MQ=255) actacAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTa > 1:2515699/1‑150 (MQ=255) tacAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAAc > 1:3427692/1‑150 (MQ=255) acAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTTCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAAcc > 2:1699639/1‑150 (MQ=255) acAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAAcc < 1:1003392/150‑1 (MQ=255) aTGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGc > 1:3614488/1‑150 (MQ=255) tttGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGcacca < 2:4056374/150‑1 (MQ=255) tttGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGcacca < 2:4405699/150‑1 (MQ=255) tttGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGcacca > 2:2868637/1‑150 (MQ=255) tgAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCAcgcc > 2:3659902/1‑150 (MQ=255) tgAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCAcgcc < 1:545722/150‑1 (MQ=255) tgAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCAcgcc < 1:1817117/150‑1 (MQ=255) aaGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCAcgccgc > 2:1318631/1‑150 (MQ=255) aaGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCAcgccgc > 1:2796076/1‑150 (MQ=255) aGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACgccgcc > 1:4232361/1‑150 (MQ=255) aGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATc > 2:2349216/1‑150 (MQ=255) gTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCa < 2:2254486/150‑1 (MQ=255) gTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCAATTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCa < 1:2894585/150‑1 (MQ=255) ttCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACg < 2:477426/150‑1 (MQ=255) ttCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACg < 2:1527199/150‑1 (MQ=255) tCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACgg > 1:4005336/1‑150 (MQ=255) cAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGt > 1:4353170/1‑150 (MQ=255) cccGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCggg > 2:3192899/1‑150 (MQ=255) ggATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAAc > 2:1772205/1‑150 (MQ=255) gATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACt > 1:925760/1‑150 (MQ=255) aTTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTg < 1:761428/150‑1 (MQ=255) aGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAAc < 2:349474/150‑1 (MQ=255) ttGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGa < 2:4587820/150‑1 (MQ=255) ttGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGa < 1:504812/150‑1 (MQ=255) tGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGAc > 2:2693340/1‑150 (MQ=255) tGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGAc > 2:3329441/1‑150 (MQ=255) gCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCt < 1:1265782/150‑1 (MQ=255) cGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCtt > 1:2443206/1‑150 (MQ=255) gATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTc > 2:1224154/1‑150 (MQ=255) aTGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTcc > 1:3591307/1‑150 (MQ=255) tGGCTTCATCATCCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGAc > 1:1385640/1‑144 (MQ=255) cTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAg > 1:4054983/1‑150 (MQ=255) cTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAg > 1:4542070/1‑150 (MQ=255) ttCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGc > 2:1138210/1‑150 (MQ=255) ttCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGc > 2:1397691/1‑150 (MQ=255) ttCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGc > 2:511466/1‑150 (MQ=255) catcatCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCa > 1:1561820/1‑150 (MQ=255) tcatcCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGt < 2:1374776/150‑1 (MQ=255) catcCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGtt > 1:3330824/1‑150 (MQ=255) atcCCACTTCTTTATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGttt < 2:1965044/150‑1 (MQ=255) cACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGTATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCg < 1:4194540/150‑1 (MQ=255) ttcttGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCa < 2:1869483/150‑1 (MQ=255) ttcttGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCa > 1:1339971/1‑150 (MQ=255) cttGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCAGa < 2:2796076/150‑1 (MQ=255) gATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCATGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCAGACAg < 2:2014790/150‑1 (MQ=255) gATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCATGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCAGACAg < 2:2485312/150‑1 (MQ=255) gATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCAGACAg > 1:1713804/1‑150 (MQ=255) | TTTTTCCACTCTTCGTTCACTTTCGCCAGGTAGCTGGTGAAGACGAAGGAAGTCCCGGAGCCATCTGCGCGGCGTACTACAGCAATGTTTTGTGAAGGCAGTTTCAGACCCGGATTCAGTTTGGCGATGGCTTCATCATCCCACTTCTTGATTTTGCCCAGGTAGATGTCGCCGAGGGTTTTACCATCCAGCACCAGTTCGCCAGACTTCAGCCCTGGAATGTTAACCGCCAGCACCACGCCGCCAATCACGGTCGGGAACTGGAACAGACCTTCCTGAGCCAGTTTTTCGTCAGACAG > CP009273/3904338‑3904636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |