| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,907,559 | A→T | 19.5% | P334P (CCT→CCA) | glmU ← | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,907,559 | 0 | A | T | 19.5% | 735.4 / 172.1 | 286 | P334P (CCT→CCA) | glmU | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (126/104); new base T (17/39); total (143/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 289 total aligned reads displayed.
GTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGT > CP009273/3907410‑3907708 | cgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggg > 2:689597/1‑150 (MQ=255) cgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggg < 2:3280278/150‑1 (MQ=255) gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggc > 1:2899343/1‑150 (MQ=255) ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGAACCAGGACGcaaacgggcaaacggg > 2:2567205/1‑150 (MQ=255) tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCaaacgggcaaacgggc > 1:1028199/1‑150 (MQ=255) tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCaaacgggcaaacgggc > 1:194905/1‑150 (MQ=255) aTCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt > 1:1512060/1‑150 (MQ=255) aaTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGc < 1:1368988/150‑1 (MQ=255) aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGcc < 2:1666925/150‑1 (MQ=255) aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGcc < 1:4101232/150‑1 (MQ=255) ccGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTg > 2:3959733/1‑150 (MQ=255) cGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGc > 1:463630/1‑150 (MQ=255) cATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCa > 1:2539839/1‑150 (MQ=255) aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAg > 2:3797879/1‑150 (MQ=255) aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAg > 1:2922768/1‑150 (MQ=255) cGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGAt < 2:2116739/150‑1 (MQ=255) cGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGAt > 1:1403164/1‑150 (MQ=255) gCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGAtt > 1:1595484/1‑150 (MQ=255) cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTc < 1:894451/150‑1 (MQ=255) ccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCg < 1:1981357/150‑1 (MQ=255) cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGc > 2:4568733/1‑150 (MQ=255) cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGc > 2:1466836/1‑150 (MQ=255) gTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATc > 1:4682240/1‑150 (MQ=255) aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCtt > 2:1619027/1‑150 (MQ=255) aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCtt > 2:3886480/1‑150 (MQ=255) aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAACTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCtt > 1:2153236/1‑150 (MQ=255) tCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCca > 1:3845457/1‑150 (MQ=255) cAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCcac > 1:3794632/1‑150 (MQ=255) gATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACaa > 2:2003062/1‑150 (MQ=255) aTGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAAc < 1:4322358/150‑1 (MQ=255) gACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACgg < 1:1477107/150‑1 (MQ=255) gACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACgg < 2:2809092/150‑1 (MQ=255) aCCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGt < 2:4670551/150‑1 (MQ=255) ccAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGta > 1:2305062/1‑150 (MQ=255) cAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGtat < 2:3556830/150‑1 (MQ=255) cAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGtat < 1:2214778/150‑1 (MQ=255) aGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGtata > 2:1286871/1‑150 (MQ=255) aGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGtata > 2:3203812/1‑150 (MQ=255) gCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATAc < 2:3191598/150‑1 (MQ=255) cTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACg > 1:2620607/1‑150 (MQ=255) tttCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACgg < 2:1413731/150‑1 (MQ=255) cGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACt < 1:2088689/150‑1 (MQ=255) gAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTg > 2:3630717/1‑150 (MQ=255) aGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGa > 1:1696997/1‑150 (MQ=255) aGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGa > 1:925057/1‑150 (MQ=255) gCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCACACGGGCACACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGAt > 2:1320347/1‑150 (MQ=255) gCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTACCACAACGGTATACGGACTGAt > 2:3713377/1‑150 (MQ=255) ccTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGAtt < 1:3190426/150‑1 (MQ=255) ttACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCg < 2:4141517/150‑1 (MQ=255) ttACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCg < 1:1546634/150‑1 (MQ=255) ttACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCg < 1:1097352/150‑1 (MQ=255) aCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcatc < 1:578500/150‑1 (MQ=255) gcgcTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGc < 1:65859/150‑1 (MQ=255) cTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCaa > 1:3502724/1‑150 (MQ=255) cTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCaa > 2:1566432/1‑150 (MQ=255) ttttttCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAAt < 2:4070571/150‑1 (MQ=255) tttttCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATc < 1:2713180/150‑1 (MQ=255) tttCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCAc < 2:4724103/150‑1 (MQ=255) tctcAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGt < 1:3547238/150‑1 (MQ=255) ctcAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGtt < 2:4236356/150‑1 (MQ=255) tcAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGttt < 2:1140053/150‑1 (MQ=255) aaCGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGttttt < 2:1971375/150‑1 (MQ=255) aaCGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGttttt < 2:1872704/150‑1 (MQ=255) aCGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTa < 2:2689593/150‑1 (MQ=255) cGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTaa > 2:3468971/1‑150 (MQ=255) gAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAAt < 1:4501978/150‑1 (MQ=255) aGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCa > 1:2525154/1‑150 (MQ=255) gTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCAc > 1:75360/1‑150 (MQ=255) gTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCAc > 1:2380639/1‑150 (MQ=255) ttACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACg < 1:1322129/150‑1 (MQ=255) aCCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCa > 1:1855621/1‑150 (MQ=255) cGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAc < 2:2978074/150‑1 (MQ=255) cGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAc > 2:273900/1‑150 (MQ=255) cGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAc > 1:3118640/1‑150 (MQ=255) gACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTTATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAcc > 1:2217304/1‑150 (MQ=255) gACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAcc < 2:3111918/150‑1 (MQ=255) gACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAcc < 1:1286871/150‑1 (MQ=255) gACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAAcc < 2:2233913/150‑1 (MQ=255) aGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGcc < 2:2899343/150‑1 (MQ=255) gCACCTTCCAGCAACTCAACACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCa < 2:2630629/150‑1 (MQ=255) aCCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAAt < 1:669074/150‑1 (MQ=255) ccTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAAtt < 1:3260092/150‑1 (MQ=255) cTTCCAGCATCTCAGCACCTGGACGCAAACGGGCTAACGGGCCACTGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATTCGGACTGATTTCGCTATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAAttt < 2:4341403/150‑1 (MQ=255) ccAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCa < 1:2071858/150‑1 (MQ=255) cAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCCACCGGTGCCAATTTTCAc > 2:427688/1‑150 (MQ=255) cAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCAc < 1:689597/150‑1 (MQ=255) cAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCAcgcg < 2:776790/150‑1 (MQ=255) cAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCAcgcg > 1:1592131/1‑150 (MQ=255) aaCTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCGGATTCGCATCTTCCACAACGGTATACGGACTGTTTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGa > 2:2402416/1‑150 (MQ=255) aaCTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGa > 2:2200458/1‑150 (MQ=255) cTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATg < 1:3493584/150‑1 (MQ=255) aGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCACCCGGTGCCAATTTTCACGCGATGAcc > 2:3605537/1‑150 (MQ=255) gCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCg < 2:2443459/150‑1 (MQ=255) cACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCga > 2:4578786/1‑150 (MQ=255) cACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCga > 1:3165379/1‑150 (MQ=255) aCCAGGACACAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCgag > 2:3478982/1‑150 (MQ=255) cAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGagag > 1:1887015/1‑150 (MQ=255) cAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGagag > 1:3751043/1‑150 (MQ=255) cAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGagag > 2:2811774/1‑150 (MQ=255) aGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGt > 2:538893/1‑150 (MQ=255) | GTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCACGCTGTTTTTAATCACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGT > CP009273/3907410‑3907708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |