| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,917,233 | G→T | 10.1% | I587I (ATC→ATA) | mnmG ← | 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,917,233 | 0 | G | T | 10.1% | 1094.4 / 72.7 | 308 | I587I (ATC→ATA) | mnmG | 5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| Reads supporting (aligned to +/- strand): ref base G (116/161); new base T (16/15); total (132/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGC > CP009273/3917084‑3917382 | tACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCg > 1:1455911/1‑150 (MQ=255) ggCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCAc > 2:1886/1‑150 (MQ=255) cATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACtt > 1:2876294/1‑150 (MQ=255) tttttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCg > 2:1035323/1‑150 (MQ=255) tttttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCg < 1:1322550/150‑1 (MQ=255) ttttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGt > 1:1067606/1‑150 (MQ=255) tttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGtt < 2:1088029/150‑1 (MQ=255) ttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTa < 2:1614826/150‑1 (MQ=255) ttAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTa < 1:2708666/150‑1 (MQ=255) aTGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGaa > 1:773560/1‑150 (MQ=255) gTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGAc < 2:2232766/150‑1 (MQ=255) ttATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGAcc > 1:2242242/1‑150 (MQ=255) tGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGa > 1:3384320/1‑150 (MQ=255) gcTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATAc > 2:1472563/1‑150 (MQ=255) gcTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATAc > 2:3860666/1‑150 (MQ=255) tACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCt > 1:3006203/1‑150 (MQ=255) cgacgCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTgg < 1:371225/150‑1 (MQ=255) gcagcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGt > 2:2029637/1‑150 (MQ=255) gcagcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGt < 2:336992/150‑1 (MQ=255) cagcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTa < 1:2201161/150‑1 (MQ=255) cagcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTa < 1:1111289/150‑1 (MQ=255) agcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTaa > 1:138405/1‑150 (MQ=255) agcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTaa < 2:733287/150‑1 (MQ=255) agcaTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTATGGCGATCACTTCGTTAGAAACACAGGATACCTGTCGGTaa > 1:3344423/1‑150 (MQ=255) aTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATcc > 2:84043/1‑150 (MQ=255) aTACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATcc > 1:2319440/1‑150 (MQ=255) ccTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAgtg < 1:2377445/150‑1 (MQ=255) cTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAgtgt > 2:2055202/1‑150 (MQ=255) tgtttgttCAGCCCCACCAGCAGAAGGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGAGAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCGGGCGGTAATCCAGTGTc < 2:2802585/150‑1 (MQ=255) tGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTc > 1:834316/1‑150 (MQ=255) ttCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGt < 2:2528193/150‑1 (MQ=255) cAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAg < 1:3607236/150‑1 (MQ=255) gCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCa < 2:2361008/150‑1 (MQ=255) gCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCa < 2:2169444/150‑1 (MQ=255) ccACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAg > 2:1211873/1‑150 (MQ=255) cacaCCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAgg > 2:4676931/1‑150 (MQ=255) cacCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGgt > 1:2652029/1‑150 (MQ=255) acCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGgtg < 1:32468/150‑1 (MQ=255) agcagAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTtc > 1:2114792/1‑150 (MQ=255) agcagAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTtc > 2:822859/1‑150 (MQ=255) gcagAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTtct < 1:3307158/150‑1 (MQ=255) cagAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTtctc < 2:3974553/150‑1 (MQ=255) cagAATGGAGATGGCCGCAGGCGTGACACCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTtctc < 1:432160/150‑1 (MQ=255) agAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCg > 1:150132/1‑150 (MQ=255) caTGGAGCTGGCCGCCGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGtt < 1:4412328/149‑1 (MQ=255) aTGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTa > 1:374088/1‑150 (MQ=255) aTGGAGAGGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTa < 2:3417836/150‑1 (MQ=255) agaTGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCa < 2:1301951/150‑1 (MQ=255) ggCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAgctg < 2:4565702/150‑1 (MQ=255) ggCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAgctg < 2:2819447/150‑1 (MQ=255) ccGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACATGGCGGTAATCCAGTGTCTCGGGTAGCAGGGTGTTCTCGTTACGCAgctgct > 1:518101/1‑150 (MQ=255) cGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCtt > 2:1867990/1‑150 (MQ=255) cGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCtt > 2:175664/1‑150 (MQ=255) cAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCtttt < 1:2002785/150‑1 (MQ=255) cAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCtttt > 1:3975054/1‑150 (MQ=255) cAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGAtttt < 2:2220540/150‑1 (MQ=255) aGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATGCCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTc < 1:639046/150‑1 (MQ=255) cGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGAt > 1:4557971/1‑150 (MQ=255) tGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGAtct < 2:4430126/150‑1 (MQ=255) gACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGAtctc < 1:4012433/150‑1 (MQ=255) aCGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCa > 1:4581100/1‑150 (MQ=255) ccAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCt < 2:4241879/150‑1 (MQ=255) ccAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCt < 2:3210015/150‑1 (MQ=255) ccAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCt > 1:1219342/1‑150 (MQ=255) aGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTg < 2:2125743/150‑1 (MQ=255) aaaTACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCt > 1:186255/1‑150 (MQ=255) aaaTACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCt < 1:2946907/150‑1 (MQ=255) aTACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTgg < 2:3941458/150‑1 (MQ=255) aTACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTgg < 2:2518026/150‑1 (MQ=255) gcgAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGgcgcg < 2:3118557/150‑1 (MQ=255) gAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGcgcgcg < 1:2848062/150‑1 (MQ=255) aGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGat > 2:1936782/1‑150 (MQ=255) aGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGat > 1:261071/1‑150 (MQ=255) gCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGata < 1:1780857/150‑1 (MQ=255) tGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATaa < 2:3635265/150‑1 (MQ=255) ggCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAAc < 1:4643295/150‑1 (MQ=255) ccGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCt < 2:1014756/150‑1 (MQ=255) gATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTc > 2:3577493/1‑150 (MQ=255) aTAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCTGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCg < 2:3384192/150‑1 (MQ=255) aTAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCg > 1:3486254/1‑150 (MQ=255) aTAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCg < 2:511056/150‑1 (MQ=255) agagGCTGGTTTGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTa > 2:1638826/1‑150 (MQ=255) agagGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTa < 2:482206/150‑1 (MQ=255) ggCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTAttt < 1:4023521/150‑1 (MQ=255) ggTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAAcc > 2:2923301/1‑150 (MQ=255) ggTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAAcc < 2:578454/150‑1 (MQ=255) gTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCt < 2:2978490/150‑1 (MQ=255) ttGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGa < 1:534498/150‑1 (MQ=255) ttGTGATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGa < 1:365654/150‑1 (MQ=255) ttGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGa < 2:3796778/150‑1 (MQ=255) tgtgATCGTTAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGaa > 2:207656/1‑150 (MQ=255) gATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAAtct > 1:1570525/1‑150 (MQ=255) gATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAAtct < 1:2793696/150‑1 (MQ=255) gATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAAtct < 2:138478/150‑1 (MQ=255) cGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCaa < 2:635003/150‑1 (MQ=255) tAAGTTTGGCTATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCt < 2:2876294/150‑1 (MQ=255) tAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCt > 1:2509511/1‑150 (MQ=255) gTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGAGGTAATCCAGTGTCGCGGGTAGCAGTGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGtt < 2:4022954/150‑1 (MQ=255) tGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTccg > 1:2284856/1‑150 (MQ=255) gATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCcgccgc > 1:1016264/1‑150 (MQ=255) | TACCAGGCATTTTTAATGCGTTATGCGCTACGACGCAGCATACCCTGTTTTTTCAGCCACACCAGCAGAATGGAGATGGCCGCAGGCGTGACGCCAGAAATACGCGAAGCTTGGCCGATAGAGGCTGGTTTGTGATCGTTAAGTTTGGCGATCACTTCGTTAGAAAGACCGGATACCTGGCGGTAATCCAGTGTCGCGGGTAGCAGGGTGTTCTCGTTACGCAGCTGCTTTTCGATCTCATCTTGCTGGCGCGCGATATAACCTTCGTATTTAACCTGAATCTCAACCTGTTCCGCCGC > CP009273/3917084‑3917382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |