| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,921,982 | T→A | 10.8% | T328S (ACT→TCT) | viaA ← | stimulator of RavA ATPase activity; von Willebrand factor domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,921,982 | 0 | T | A | 10.8% | 889.5 / 77.7 | 274 | T328S (ACT→TCT) | viaA | stimulator of RavA ATPase activity; von Willebrand factor domain protein |
| Reads supporting (aligned to +/- strand): ref base T (140/104); new base A (13/17); total (153/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 274 total aligned reads displayed.
CCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATAC > CP009273/3921834‑3922130 | ccTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTa > 2:1879181/1‑150 (MQ=255) cTTGTGGGCCTGAAAGCTCATACCGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTAt < 2:1584966/150‑1 (MQ=255) cTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTAt > 2:3674868/1‑150 (MQ=255) tgtgGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATcc < 1:3898566/150‑1 (MQ=255) tgtgGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATcc > 2:2875518/1‑150 (MQ=255) gggCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCcaca < 2:4405913/150‑1 (MQ=255) ggCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCcacac < 1:198535/150‑1 (MQ=255) ccTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAg > 2:398314/1‑150 (MQ=255) tGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGAc < 1:3786340/150‑1 (MQ=255) aaGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAAt < 1:348148/150‑1 (MQ=255) cTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATaaa < 2:1512565/150‑1 (MQ=255) cTCATAACGGACGATCTAGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATaaa < 2:2488952/150‑1 (MQ=255) tCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAAc < 1:2263639/150‑1 (MQ=255) tCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAAc > 2:808100/1‑150 (MQ=255) cATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACg < 1:1233500/150‑1 (MQ=255) cATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAACg > 2:2078920/1‑150 (MQ=255) aCGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGccc > 2:817347/1‑150 (MQ=255) gggagtaTCTGGGTGTAAAATAGAATATTATAGCTGCGCGGGTTTTCTGCGTGAGCAATGCGAATCAAGGCCTGGCAGAAGGATTTCGAACTGTGTTCTTTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCcg < 2:4566916/144‑1 (MQ=255) cGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCcg > 1:2735248/1‑150 (MQ=255) ggACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCcgc > 2:4212900/1‑150 (MQ=255) gATCTCGGTGGAAAATAGCATACTATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCgg > 1:4087069/1‑150 (MQ=255) ctcGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCTGGCAGAACGCTTTCGCACACTTTTCATTAAAGCCGCCCATTGAGCCGGATGTATCCACAAAGACAATAAACGGCCCGCGCGGCTg < 1:1427667/150‑1 (MQ=255) ctcGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTg > 1:4016696/1‑150 (MQ=255) cGGTGGAAAATAGCATAATATAGCAGCGCAGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCTTTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGtt < 1:1876957/150‑1 (MQ=255) ggTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTc > 2:4008793/1‑150 (MQ=255) aaaTAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTa > 2:1278454/1‑150 (MQ=255) tAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATc > 2:2306401/1‑150 (MQ=255) tAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATc > 2:730704/1‑150 (MQ=255) aataataTAGCAGCGCCGTTTTTCTGCGAGAGAAATGCGCATCACGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACATACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCttt < 1:4131181/149‑1 (MQ=255) aataataTAGCAGCGCCGTTTTTCGGCGAGCGCAATGCGCAGCACGGCCAGGACGAAGGCTTTCGCACCCTTTTCATTAACGCCGCCATTTGCGCCGGAATTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCttt < 1:2889275/149‑1 (MQ=255) ataataTCGCAGCGCGGTTTTTCTGGGAGAGCATTGCGCATCACGGCCTGGCTTAACGCTTTCGCACAGTTTTCATTAAAGCCGCCCATTGAGCCGGAATAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTa < 1:4606451/150‑1 (MQ=255) ataataTAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTa > 2:1764787/1‑150 (MQ=255) tataGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTa > 2:2692671/1‑150 (MQ=255) ataGCAGCGCGGTTTTTCTGCTAGAGCAAGGCGAAACACGGCCCGGCAGAACGATTTCGCACACTTTTCATTAACGCCGCCAATTGAGCCGTAATTAACAACACACACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTac < 1:2067032/150‑1 (MQ=255) taGCTGCGCCGTTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGAATAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGTAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacc < 1:3823721/150‑1 (MQ=255) taGCAGCGCGTGTTTTCTGCGATAGCAATGCGCATCACGCCCAGGCAGAACGCTTTCGCACACTTTAAATAAACGCCGCCCTTTGTGCCGTATTTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacc < 1:3261318/150‑1 (MQ=255) taGCAGCGCGGGTTTTCTGCGAGAGCAATGCGCATCATGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCTTTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacc < 2:221062/150‑1 (MQ=255) taGCAGCGCCGGTTTTCTGCGAGAGCATTGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacc < 2:2594879/150‑1 (MQ=255) agcagcGCCGGTTTTCTGCGAGAGCAATGCTCATCAAGGCCAGGCAGAACGCTTTCGCACAATGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacca > 1:3165074/1‑150 (MQ=255) agcagcGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacca > 2:1951896/1‑150 (MQ=255) agcagcGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTacca < 2:2741253/150‑1 (MQ=255) gcagcGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTaccac < 1:1955493/150‑1 (MQ=255) cGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGt > 2:1456891/1‑150 (MQ=255) ggTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGATGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGtt < 2:3037042/150‑1 (MQ=255) ggTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGtt > 1:3946710/1‑150 (MQ=255) gTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTc < 2:4348967/150‑1 (MQ=255) tttCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGa < 2:1088950/150‑1 (MQ=255) tttCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGa > 1:3263902/1‑150 (MQ=255) ttCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGAt > 2:3210152/1‑150 (MQ=255) cTGCGATAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCa < 2:1850156/150‑1 (MQ=255) tGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCAc > 1:985295/1‑150 (MQ=255) gCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACt > 2:224056/1‑150 (MQ=255) gagaGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACttt > 1:4426921/1‑150 (MQ=255) agagCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACtttt > 1:4743137/1‑150 (MQ=255) gagCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACttttt > 1:2428972/1‑150 (MQ=255) gaaaTGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCa < 2:3910627/148‑1 (MQ=255) cAATGCGCATCACGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCAc < 2:3953968/150‑1 (MQ=255) attGCGCAACACGGCCCGGCAGAACGATTTCCCACATTTTTCATTAAAGCCGCCCATTGCGCCGTAATTAACCAAACACACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACg < 1:2379421/148‑1 (MQ=255) aaTGCGAAACACGGCCCGGCATAACGATTTCGCACACTGTTCATTAAAGCCGCCCATGGAGCCGTAATTAACCACACACACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACg < 1:3594703/150‑1 (MQ=255) aTGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGc > 1:2558285/1‑150 (MQ=255) gcgcATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCa < 1:1557723/150‑1 (MQ=255) cgcATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCAc > 2:403446/1‑150 (MQ=255) aaaGGCCAGGCAGAACGCTTTCGCACACTGTTAATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTc < 2:3385798/149‑1 (MQ=255) ccAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGt > 2:640011/1‑150 (MQ=255) gCAGAACGCTTTCGCACACTGTTAATTAAAGCCGCCCATTGAGCCGTAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAg < 2:1774274/150‑1 (MQ=255) cAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAgg < 2:3666495/150‑1 (MQ=255) aaCGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGa > 2:4742099/1‑150 (MQ=255) aaCGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGa > 1:1322789/1‑150 (MQ=255) tttCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGt > 1:1632666/1‑150 (MQ=255) cacaCTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCa > 2:863743/1‑150 (MQ=255) cTGTTAATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTg < 2:3576220/150‑1 (MQ=255) tGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGt > 1:1782655/1‑150 (MQ=255) gTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGtt > 1:3017691/1‑150 (MQ=255) cATTAAAGCCGCCCATTGAGCCGTAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGttttt < 2:4361163/150‑1 (MQ=255) cATTAAAGCCGCCCATTGAGCCGTAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGttttt < 2:1985805/150‑1 (MQ=255) cATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGttttt < 1:1946684/150‑1 (MQ=255) cATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGttttt < 2:4749078/150‑1 (MQ=255) cATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGttttt < 2:1412461/150‑1 (MQ=255) aTTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTc > 2:1057345/1‑150 (MQ=255) aTTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTc > 2:3443347/1‑150 (MQ=255) ttAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCCCGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcc > 1:3685162/1‑150 (MQ=255) ttAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcc > 2:3854671/1‑150 (MQ=255) ttAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcc > 1:1104230/1‑150 (MQ=255) ttAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcc > 1:711755/1‑150 (MQ=255) tAAAGCCGCCCTTTGAGGCGTATGTATCAACACTTACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGTCTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTcca < 1:3347596/150‑1 (MQ=255) aaaGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTCATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTccac > 2:2910041/1‑150 (MQ=255) aaGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTccacc > 2:2322541/1‑150 (MQ=255) gccCATTGAGCCGGAAGTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCg < 2:501599/150‑1 (MQ=255) cccATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGa < 2:3225375/150‑1 (MQ=255) ccATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGAc > 1:4034487/1‑150 (MQ=255) ccATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGAc < 2:279586/150‑1 (MQ=255) cATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACg > 1:976907/1‑150 (MQ=255) tttGCGCCGGATGTATCCACACAGACAATACACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACgg < 1:1030830/149‑1 (MQ=255) tGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTa > 1:1554528/1‑150 (MQ=255) tGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTa > 1:4235052/1‑150 (MQ=255) gAGCCGGAAGAATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTaa > 2:3127811/1‑150 (MQ=255) aGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCACCTGTTTTTCCACCAGCCGACGGTaaa > 2:3295487/1‑150 (MQ=255) cGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTaaaaat > 1:1200865/1‑148 (MQ=255) aaGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGTTCACTTTTTCACGCCCCGACTCACCGTGCAGGCGATAGGTGAGCCACTGTTTTTACACCAGCCGACGGTAAAAATCAt > 1:880411/1‑150 (MQ=255) gTATCCACACAGACAATCCACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATAc < 2:4073209/150‑1 (MQ=255) | CCTTGTGGGCCTGAAAGCTCATAACGGACGATCTCGGTGGAAAATAGCATAATATAGCAGCGCCGGTTTTCTGCGAGAGCAATGCGCATCAAGGCCAGGCAGAACGCTTTCGCACACTGTTCATTAAAGCCGCCCATTGAGCCGGAAGTATCCACACAGACAATAAACGGCCCGCGCGGCTGTTCATCGTAATCTTTATGTACCACCGGACGTTCGATCACTTTTTCACGCCACGACTCACCGTGCAGGCGATAGGTGAGCAACTGTTTTTCCACCAGCCGACGGTAAAACTCATAC > CP009273/3921834‑3922130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |