| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,971,254 | C→T | 5.6% | L124F (CTT→TTT) | wecF → | TDP‑Fuc4NAc:lipidIIFuc4NAc transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,971,254 | 0 | C | T | 5.6% | 1198.7 / 37.4 | 338 | L124F (CTT→TTT) | wecF | TDP‑Fuc4NAc:lipidIIFuc4NAc transferase |
| Reads supporting (aligned to +/- strand): ref base C (165/153); new base T (8/11); total (173/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 341 total aligned reads displayed.
CTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATACG > CP009273/3971105‑3971403 | aaCCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCtt < 1:2863091/150‑1 (MQ=255) aaCCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCtt > 1:3958812/1‑150 (MQ=255) cGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTTGCATATCTGGGGGGCAGAACTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCttttt > 2:1191492/1‑150 (MQ=255) cGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCttttt > 2:4662185/1‑150 (MQ=255) cagcagCGTTTTTTATTCCACGGTCAGTTAAATCCCACACTGTGGCTGGCTCTTCTGATTGGTGGCATTAAGCCCACCCAGTTTTTATGGCAAATATGGGGGGCAGACCAGTATGAGCTTTCCAGTGGCTGGAGATATAAGCatttttta > 1:2047258/1‑148 (MQ=255) agcGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCAc < 1:1838837/150‑1 (MQ=255) agcGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCAc > 2:3941739/1‑150 (MQ=255) agcGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCAc > 1:1066823/1‑150 (MQ=255) cGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTa < 2:888848/150‑1 (MQ=255) tttttCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGt > 1:3406388/1‑150 (MQ=255) cttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCt < 2:1075807/150‑1 (MQ=255) ttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTg < 1:2189088/150‑1 (MQ=255) ttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTg < 1:2424424/150‑1 (MQ=255) ccACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGgc > 2:2903088/1‑150 (MQ=255) ccACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGgc > 2:420502/1‑150 (MQ=255) tCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAg < 2:1280830/150‑1 (MQ=255) cAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGt > 1:1186440/1‑150 (MQ=255) aaTCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAATCGAGTc > 2:2544543/1‑150 (MQ=255) aaTCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTc > 2:171361/1‑150 (MQ=255) aTCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCg < 1:682949/150‑1 (MQ=255) tCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCgg < 2:1813213/150‑1 (MQ=255) tCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCgg > 1:1535221/1‑150 (MQ=255) tCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCGGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCgg < 1:1647535/150‑1 (MQ=255) cccACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGc > 1:1986454/1‑150 (MQ=255) acTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTgtgt > 1:3943390/1‑150 (MQ=255) acTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTgtgt > 1:2653623/1‑150 (MQ=255) tgtgGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTAt < 1:377800/150‑1 (MQ=255) gtgGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTAtt > 1:454690/1‑150 (MQ=255) ggctggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTg < 2:3688928/150‑1 (MQ=255) gctggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGc < 1:3829733/150‑1 (MQ=255) ctggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGcc < 2:3995307/150‑1 (MQ=255) tggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCa < 2:1557933/150‑1 (MQ=255) ggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCAc < 1:3011/150‑1 (MQ=255) gctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCAcc < 1:4582779/150‑1 (MQ=255) tgAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCgcggcg > 2:3731809/1‑150 (MQ=255) gAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGTGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGa < 1:639259/150‑1 (MQ=255) gtggtgGCATTAAGCCCAGCCAGTTTCTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGAtt > 1:2937240/1‑150 (MQ=255) ggtggCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTg > 1:546840/1‑150 (MQ=255) ggtggCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTATCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTg > 2:468915/1‑150 (MQ=255) tggAATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAg < 1:3671450/150‑1 (MQ=255) aTTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCttt > 2:2699310/1‑150 (MQ=255) tAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCttttt < 1:727855/150‑1 (MQ=255) tAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCttttt < 2:4693389/150‑1 (MQ=255) aaGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCtttttt > 1:794167/1‑150 (MQ=255) aaGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCtttttt > 2:4026942/1‑150 (MQ=255) aaGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCtttttt > 1:1402892/1‑150 (MQ=255) gCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCtttttttc > 2:3051548/1‑148 (MQ=255) ccagccagTTTTTCTGACATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCa > 1:1635471/1‑150 (MQ=255) cagTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACg < 1:3712388/150‑1 (MQ=255) cagTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACg < 2:337503/150‑1 (MQ=255) cagTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACg < 1:4274168/150‑1 (MQ=255) agTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGAGTTGAGCTTTTTTGCCAAAACGc > 2:4295068/1‑150 (MQ=255) gTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCa > 2:2492755/1‑150 (MQ=255) tttttCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCAc < 2:4124296/150‑1 (MQ=255) ttttCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCAcc > 1:4194068/1‑150 (MQ=255) ttCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCa < 2:294717/150‑1 (MQ=255) tCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCaa > 2:1248153/1‑150 (MQ=255) tCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCaa < 2:4535115/150‑1 (MQ=255) tGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAg < 1:885820/150‑1 (MQ=255) gCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAgga > 2:4394366/1‑149 (MQ=255) gCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGt < 1:4662185/150‑1 (MQ=255) gCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGt > 2:2354655/1‑150 (MQ=255) cATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTg > 2:486344/1‑150 (MQ=255) cATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTg > 1:3138658/1‑150 (MQ=255) tcgggggggCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTGACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAACGGTGCggg < 1:2705908/147‑1 (MQ=255) cTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCgggg > 2:4279835/1‑150 (MQ=255) tGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGc > 2:3089692/1‑150 (MQ=255) ggggggCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCAACCAAAGGTGCGGGGCg > 1:3229440/1‑150 (MQ=255) ggggCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAAAGCACCCAAATGTGCGGGGCGac > 2:1608120/1‑149 (MQ=255) aGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAActgct > 1:2993746/1‑150 (MQ=255) ccTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGtt > 2:2781138/1‑150 (MQ=255) ccTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGtt > 2:2963362/1‑150 (MQ=255) cTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttc > 2:684117/1‑150 (MQ=255) tGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttct > 2:3439414/1‑150 (MQ=255) tATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttcttc < 1:724660/150‑1 (MQ=255) tATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttcttc > 2:1476213/1‑150 (MQ=255) tATGAGCTGTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttcttc < 2:1162410/150‑1 (MQ=255) aTGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTcc > 2:2335378/1‑150 (MQ=255) aTGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTcc < 1:2039002/150‑1 (MQ=255) aTGAGCTGTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAACAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTcc < 1:4075721/150‑1 (MQ=255) gAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCg < 2:2582485/150‑1 (MQ=255) ttCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGAcgcg < 2:1887767/150‑1 (MQ=255) ttCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGAcgcg > 2:126552/1‑150 (MQ=255) tCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAACAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCgg < 2:3830882/150‑1 (MQ=255) ccAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTTCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGa > 1:2569320/1‑150 (MQ=255) aGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATg > 2:3468770/1‑150 (MQ=255) tGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGa < 2:1439889/150‑1 (MQ=255) ggCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGAc > 2:809137/1‑150 (MQ=255) cTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTTCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTACCGACGCGGATGGAccc > 1:1226834/1‑150 (MQ=255) cTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGAccc > 2:4322141/1‑150 (MQ=255) cTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGAccc < 1:4309591/150‑1 (MQ=255) cTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGACAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGAccc > 2:1298587/1‑150 (MQ=255) ttGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCt < 1:150349/150‑1 (MQ=255) tGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCtt > 1:3688520/1‑150 (MQ=255) gagaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTc > 1:4721855/1‑150 (MQ=255) gagaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTc > 1:2340056/1‑150 (MQ=255) agaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCg > 2:1318378/1‑150 (MQ=255) taAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCaa > 1:4563342/1‑150 (MQ=255) aaGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTTCCCAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAAt > 1:41296/1‑150 (MQ=255) aaGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAAt < 2:3639409/150‑1 (MQ=255) | CTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATACG > CP009273/3971105‑3971403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |