| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,432,682 | G→T | 9.0% | E162* (GAA→TAA) | tamA → | translocation and assembly module for autotransporter export, outer membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,432,682 | 0 | G | T | 9.0% | 907.1 / 48.5 | 245 | E162* (GAA→TAA) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit |
| Reads supporting (aligned to +/- strand): ref base G (86/137); new base T (9/13); total (95/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 246 total aligned reads displayed.
TATTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCC > CP009273/4432533‑4432830 | aTTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGa < 1:3742727/150‑1 (MQ=255) cgcgGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAAttt < 1:419266/150‑1 (MQ=255) cggcggcgCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTAc < 1:379626/150‑1 (MQ=255) gcggcgCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCa < 2:665272/150‑1 (MQ=255) gcgcgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAgcg < 1:4716529/150‑1 (MQ=255) gcgGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCa < 1:33342/150‑1 (MQ=255) gACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAATGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCt > 2:303674/1‑150 (MQ=255) ccGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTgg > 2:2217422/1‑150 (MQ=255) cGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTggg > 1:1636969/1‑150 (MQ=255) cGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTggg > 1:989645/1‑150 (MQ=255) gATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGc < 1:3104326/150‑1 (MQ=255) tAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCAt > 2:504483/1‑150 (MQ=255) aaaGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCAtt > 1:865434/1‑150 (MQ=255) gACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTgcg < 2:4562949/150‑1 (MQ=255) cTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCt > 2:308839/1‑150 (MQ=255) tATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTc < 1:570031/150‑1 (MQ=255) tATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTc < 1:2662049/150‑1 (MQ=255) tATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTc < 1:289918/150‑1 (MQ=255) tATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTc < 2:4302859/150‑1 (MQ=255) gAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCt < 1:3844035/150‑1 (MQ=255) gAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCt < 1:3418209/150‑1 (MQ=255) gAAAGTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCt < 2:1096893/150‑1 (MQ=255) aacttGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTg < 2:3718729/147‑1 (MQ=255) aaTTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGc < 1:39741/150‑1 (MQ=255) tGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATa < 1:3683259/150‑1 (MQ=255) tGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATa < 1:4295691/150‑1 (MQ=255) gCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATaa < 2:2252975/150‑1 (MQ=255) cTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATaaa > 2:952934/1‑150 (MQ=255) tCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAg < 1:2283396/150‑1 (MQ=255) tCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAg < 2:2857921/150‑1 (MQ=255) gATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGcc > 2:1718983/1‑150 (MQ=255) aTACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCt < 1:941921/150‑1 (MQ=255) tACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCtt > 1:1276411/1‑150 (MQ=255) aCTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTc < 1:176615/150‑1 (MQ=255) tCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTg < 1:1108606/150‑1 (MQ=255) gCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTggg < 2:205082/150‑1 (MQ=255) cGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGata < 1:2020198/150‑1 (MQ=255) ggCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGatat < 2:1807354/150‑1 (MQ=255) ggCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGatat < 1:4752208/150‑1 (MQ=255) cTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTg > 2:1346714/1‑150 (MQ=255) tATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGa > 2:46735/1‑150 (MQ=255) aTTGGCACGGTACTGAACCAGGGCGATTATGAAACTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGAt < 2:3689457/150‑1 (MQ=255) ttGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGAtt < 1:131951/150‑1 (MQ=255) tGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATta > 1:2765086/1‑150 (MQ=255) ggCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATtat < 1:4465730/150‑1 (MQ=255) ggCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATtat < 2:656801/150‑1 (MQ=255) aCGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAAc > 2:3131055/1‑150 (MQ=255) aCGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAAc > 1:4170208/1‑150 (MQ=255) aCGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAAc > 2:761919/1‑150 (MQ=255) aCGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAAc > 1:3392417/1‑150 (MQ=255) gTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGt < 1:4566647/150‑1 (MQ=255) tACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTg < 2:4597192/150‑1 (MQ=255) tACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTg < 2:2892058/150‑1 (MQ=255) tACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTg < 2:2468273/150‑1 (MQ=255) cAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGt > 1:1936134/1‑150 (MQ=255) aGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGtt < 2:1449263/150‑1 (MQ=255) gCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTAcc < 1:3531345/150‑1 (MQ=255) tATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCttt > 2:2346982/1‑150 (MQ=255) tATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATAGCGCTCGGCATGCATAAAGACTTCTGGGATATTGATTATAACAGTGGAGAACGTAAACGAttt > 2:4281274/1‑150 (MQ=255) aTGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTACTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTg > 2:1972346/1‑150 (MQ=255) gAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTggg > 2:1690822/1‑150 (MQ=255) gAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTggg > 2:4076207/1‑150 (MQ=255) aaTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAt < 1:2724219/150‑1 (MQ=255) aaTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAt < 1:3582622/150‑1 (MQ=255) aTTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAtg > 1:2805116/1‑150 (MQ=255) tttCAAAAAGTCCTTAACCAGCAGTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCAtgt < 2:4436948/150‑1 (MQ=255) aaaaaGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGAcc > 2:3892838/1‑150 (MQ=255) aaaGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCtt > 2:3263008/1‑150 (MQ=255) aaaGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCtt > 1:924414/1‑150 (MQ=255) aaGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCttt < 2:1842917/150‑1 (MQ=255) tCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGaa < 1:2500267/150‑1 (MQ=255) cTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAgg < 1:3926151/150‑1 (MQ=255) tAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGAt < 1:1078937/150‑1 (MQ=255) aaCCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATc < 1:2217422/150‑1 (MQ=255) aCCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATca < 2:3410798/150‑1 (MQ=255) ccAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcac > 1:1665880/1‑150 (MQ=255) cAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATcaca < 1:3196681/150‑1 (MQ=255) gCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACaaa < 1:1617857/150‑1 (MQ=255) taTTGCGTTGCGTAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAAt > 2:2640461/2‑150 (MQ=255) cgttgcgtAAAGGTTATTTCGATAGCTAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgcg > 1:731657/1‑150 (MQ=255) cgttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCcgcg < 1:2345651/150‑1 (MQ=255) gttgcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGa < 1:3179093/150‑1 (MQ=255) gcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGa < 2:3862686/150‑1 (MQ=255) gcgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGa > 1:797461/1‑150 (MQ=255) cgtAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGaa > 2:1917685/1‑150 (MQ=255) tAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATa > 2:2220375/1‑150 (MQ=255) tAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATa > 1:1385273/1‑150 (MQ=255) aaGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATAcc < 2:871743/150‑1 (MQ=255) gTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGc > 2:1062590/1‑150 (MQ=255) ttATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAACGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCa < 2:3967244/150‑1 (MQ=255) ttCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAAt < 2:747287/150‑1 (MQ=255) cGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCt < 1:1490128/150‑1 (MQ=255) cGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCt > 1:2589829/1‑150 (MQ=255) gATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg > 1:1136528/1‑150 (MQ=255) gATAGCGAATTTACCAAAGCGCAGCTGGGCACTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTg > 2:4128593/1‑150 (MQ=255) aTAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTgg > 2:2438832/1‑150 (MQ=255) aGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTg < 2:1534445/150‑1 (MQ=255) gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc > 2:4355715/1‑150 (MQ=255) gCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGc < 1:572828/150‑1 (MQ=255) cGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGcc > 2:2884402/1‑150 (MQ=255) | TATTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCC > CP009273/4432533‑4432830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |