| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,433,194 | C→A | 7.9% | G332G (GGC→GGA) | tamA → | translocation and assembly module for autotransporter export, outer membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,433,194 | 0 | C | A | 7.9% | 1015.8 / 45.3 | 272 | G332G (GGC→GGA) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit |
| Reads supporting (aligned to +/- strand): ref base C (128/122); new base A (9/13); total (137/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 277 total aligned reads displayed.
AAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTACCAAT > CP009273/4433045‑4433341 | aaGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCg > 1:1711329/1‑150 (MQ=255) gCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGt < 1:4267505/150‑1 (MQ=255) gACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGttt < 1:4022741/150‑1 (MQ=255) gACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGttt < 2:1290747/150‑1 (MQ=255) gTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTaa < 2:1766864/150‑1 (MQ=255) aaaaGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCa > 2:1912423/1‑150 (MQ=255) aaGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACt > 2:172349/1‑150 (MQ=255) aaGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACt > 2:2141596/1‑150 (MQ=255) gCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGa < 1:4631383/150‑1 (MQ=255) gTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCt > 1:124386/1‑150 (MQ=255) tGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTg < 2:4706887/150‑1 (MQ=255) gATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGaa < 1:1946314/150‑1 (MQ=255) gATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGaa > 1:2572292/1‑150 (MQ=255) aaCTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAATCGCACTGACCTGAACGAt > 1:1818289/1‑150 (MQ=255) ctctTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATAc > 2:2713909/1‑150 (MQ=255) ctctTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATAc > 2:3826421/1‑150 (MQ=255) ctctTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATAc < 1:899185/150‑1 (MQ=255) tctTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATAcc < 1:2779244/150‑1 (MQ=255) aTGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAAt > 1:1010287/1‑150 (MQ=255) ggTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCt < 2:2494788/150‑1 (MQ=255) caGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTc < 2:2924226/150‑1 (MQ=255) aGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTcc > 1:1093656/1‑150 (MQ=255) cTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACt < 2:2583698/150‑1 (MQ=255) gACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTAc < 1:1390054/150‑1 (MQ=255) caccaGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCt > 2:962155/1‑150 (MQ=255) ccaGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCtgg < 1:1414111/150‑1 (MQ=255) aGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCtggtg < 2:4735719/150‑1 (MQ=255) cTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGACCAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCtt > 1:891474/1‑150 (MQ=255) cTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTGTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCtt > 1:1977054/1‑150 (MQ=255) gTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTtctc > 2:1822803/1‑150 (MQ=255) gTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTtctc < 1:214231/150‑1 (MQ=255) gTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTtctc < 1:215745/150‑1 (MQ=255) ttCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTa < 1:3060751/150‑1 (MQ=255) tCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGTCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTAc > 2:240934/1‑150 (MQ=255) ccGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACt > 2:4422909/1‑150 (MQ=255) ccGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACt > 1:1571196/1‑150 (MQ=255) cgcCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTggg < 1:4014780/150‑1 (MQ=255) cGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGAtc > 1:1967182/1‑150 (MQ=255) ggAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGAtct > 2:3545304/1‑150 (MQ=255) ggAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGAtct > 2:546776/1‑150 (MQ=255) ggAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAAGATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCGCGCTACTGGGAtct > 2:4130227/1‑150 (MQ=255) gAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGAtctc < 2:2607398/150‑1 (MQ=255) aaCAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGAtctct < 1:440043/150‑1 (MQ=255) aaCAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGATACTGGGAtctct < 1:3165491/150‑1 (MQ=255) cAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTcc < 2:2279446/150‑1 (MQ=255) cAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTcc > 2:4480534/1‑150 (MQ=255) cAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTcc < 2:2774386/150‑1 (MQ=255) cAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACACCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTcc > 1:3534536/1‑150 (MQ=255) tCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCt < 1:1664679/150‑1 (MQ=255) gACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTgg > 1:607646/1‑150 (MQ=255) cTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCa > 1:1446505/1‑150 (MQ=255) ttCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTAGTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAg < 1:3572676/150‑1 (MQ=255) tataAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCTCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGcc < 1:981756/150‑1 (MQ=255) tataAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGcc > 2:3140251/1‑150 (MQ=255) ataAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCa < 2:686608/150‑1 (MQ=255) ataAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCa < 1:394079/150‑1 (MQ=255) ataAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCa > 2:3355811/1‑150 (MQ=255) ataAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCa < 2:3579841/150‑1 (MQ=255) aaaaTGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCAtt > 1:2027833/1‑150 (MQ=255) aaaTGCCGCTGCTTAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTa < 1:4526694/150‑1 (MQ=255) aaaTGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTa > 2:3861690/1‑150 (MQ=255) aaaTGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTa > 2:1130522/1‑150 (MQ=255) aaaTGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTa < 2:1666630/150‑1 (MQ=255) aaaTGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTa > 1:3797154/1‑150 (MQ=255) tGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAAcc < 1:699869/150‑1 (MQ=255) tGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAAcc < 1:64228/150‑1 (MQ=255) tGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAAcc > 1:3728939/1‑150 (MQ=255) ccGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTg > 2:3267811/1‑150 (MQ=255) ccGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTg > 2:61523/1‑150 (MQ=255) tgctgAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCt < 2:1573407/150‑1 (MQ=255) tgAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGa > 2:1898447/1‑150 (MQ=255) gactCCTCTGGAACAAGATTATGTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCGTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGtct < 2:3773178/147‑1 (MQ=255) aaTCCACTGGAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGtctc < 2:4000096/150‑1 (MQ=255) cACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGAcc < 1:767549/150‑1 (MQ=255) aCTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCa < 2:2927016/150‑1 (MQ=255) tGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACt > 1:291467/1‑150 (MQ=255) tGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACt > 1:117841/1‑150 (MQ=255) ggAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACTATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGAGCTGGAGTCTCGACCACta > 2:3690606/1‑149 (MQ=255) ggAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACtt > 1:2693572/1‑150 (MQ=255) ggAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACtt < 1:2673178/150‑1 (MQ=255) ggAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACtt < 2:4216590/150‑1 (MQ=255) gAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACttt < 2:1362563/150‑1 (MQ=255) gAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACttt < 1:2828999/150‑1 (MQ=255) gAACAATATTATTTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACttt > 2:1051420/1‑150 (MQ=255) aaCAATCTTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTa < 2:407805/150‑1 (MQ=255) aaCAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTa < 2:3957834/150‑1 (MQ=255) aCAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTAc > 1:2746020/1‑150 (MQ=255) aCAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTAc > 2:4545013/1‑150 (MQ=255) tattatTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAg > 1:4461677/1‑150 (MQ=255) tattatTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAg < 2:2804224/150‑1 (MQ=255) attattTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAgg > 2:836974/1‑150 (MQ=255) attattTGGTGCAGGGAGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACAATACTCAgg > 2:1224274/1‑150 (MQ=255) attTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTg < 2:2025666/150‑1 (MQ=255) attTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTg > 2:2068941/1‑150 (MQ=255) ttGGTGCGGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGaa < 1:2798152/150‑1 (MQ=255) gTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAAtt > 2:4178293/1‑150 (MQ=255) tGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTa < 1:1497558/150‑1 (MQ=255) tGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTa < 2:1501402/150‑1 (MQ=255) gCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTAc < 1:994046/150‑1 (MQ=255) ggCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTACCAAt > 1:3932851/1‑150 (MQ=255) | AAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTACCAAT > CP009273/4433045‑4433341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |