| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,515,264 | C→A | 12.7% | P119P (CCG→CCT) | yjhI ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,515,264 | 0 | C | A | 12.7% | 571.4 / 51.4 | 173 | P119P (CCG→CCT) | yjhI | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (76/75); new base A (15/7); total (91/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
GTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGACAACCCAATTC > CP009273/4515115‑4515413 | gTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTCATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTcc > 1:2869009/1‑150 (MQ=255) tATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCg < 1:109059/150‑1 (MQ=255) aTTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCgg > 1:1860153/1‑150 (MQ=255) aTTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCgg > 1:4562427/1‑150 (MQ=255) tGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGAc > 1:927410/1‑150 (MQ=255) cgTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTc < 1:1590665/150‑1 (MQ=255) cgTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTc < 2:3903612/150‑1 (MQ=255) cgTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTc > 2:2264555/1‑150 (MQ=255) cgTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTc > 1:2893629/1‑150 (MQ=255) aTGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGAt > 1:3497521/1‑150 (MQ=255) tgtgGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATc > 2:1959373/1‑150 (MQ=255) gtgGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCt < 2:1707333/150‑1 (MQ=255) tgGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCtt < 2:2476716/150‑1 (MQ=255) tgGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCtt < 1:2042196/150‑1 (MQ=255) gAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGt > 1:4611215/1‑150 (MQ=255) gAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGt < 2:2090041/150‑1 (MQ=255) aGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTc < 1:2943472/150‑1 (MQ=255) aGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTc < 2:844798/150‑1 (MQ=255) gTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCg > 1:2119492/1‑150 (MQ=255) aaCGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCgaga < 2:4207402/150‑1 (MQ=255) aaCGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGACAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCgaga > 1:553767/1‑150 (MQ=255) gTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGagatag < 1:2931164/150‑1 (MQ=255) tGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGagataga > 1:2347401/1‑150 (MQ=255) gAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGagatagat < 2:527327/150‑1 (MQ=255) gTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGatagatag > 2:3294505/1‑150 (MQ=255) tGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGc > 2:4508774/1‑150 (MQ=255) tCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGaa < 1:3646943/150‑1 (MQ=255) aaaaaaTAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATg < 2:4084407/150‑1 (MQ=255) aaaaaTAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGc < 2:1709720/150‑1 (MQ=255) aaaaTAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGct > 2:3967378/1‑150 (MQ=255) aaaTAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGctc > 1:1425963/1‑150 (MQ=255) aaaTAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGctc < 1:3697376/150‑1 (MQ=255) aataatCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGctct < 1:4055249/150‑1 (MQ=255) aatCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCa > 1:713605/1‑150 (MQ=255) ccAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGACGAAATGCTCTCCATCg > 1:4573417/1‑150 (MQ=255) aGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCAGCGcc > 2:3818367/1‑150 (MQ=255) ttcttcTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGcccc > 1:2547708/1‑150 (MQ=255) ttcttcTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGcccc > 1:547491/1‑150 (MQ=255) cttctCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCaa > 1:4406374/1‑150 (MQ=255) ttctCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAg < 1:2763268/150‑1 (MQ=255) gtCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACaa < 2:440200/150‑1 (MQ=255) cAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGt < 2:2380837/150‑1 (MQ=255) gCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCa > 2:3247877/1‑150 (MQ=255) taataaTGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACt > 2:1065212/1‑150 (MQ=255) aataatGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACtt > 2:4603904/1‑150 (MQ=255) aataatGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACtt > 2:1682054/1‑150 (MQ=255) ataatGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACttt > 2:1807447/1‑150 (MQ=255) aatGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTGTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTc < 2:2159796/150‑1 (MQ=255) atGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCa > 2:2261710/1‑150 (MQ=255) atGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCa > 2:591033/1‑150 (MQ=255) gCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGc > 1:1519990/1‑150 (MQ=255) cTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGa > 2:4056404/1‑150 (MQ=255) aCCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACaa > 2:3098269/1‑150 (MQ=255) aCCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACaa > 2:2241298/1‑150 (MQ=255) cccAACGCGTTAATATGAAACTCATTTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAAc < 1:3227791/150‑1 (MQ=255) cttgttAATATTCAACTCTAGTTTTTTGCATATCCTTCTTTTGATCTTTGTTACAGTGTCCGTACTTTCGATCTTTTGTATATCTATAGCCGAAATGCTCACCATCTCCACAAGTTGACAAACCAGTCCACTTTTCAGCGACATCTCCTg < 1:2471265/145‑1 (MQ=255) gTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCAtt > 1:602690/1‑150 (MQ=255) tatGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGcc < 2:458389/150‑1 (MQ=255) tatGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGcc < 1:3094383/150‑1 (MQ=255) tatGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGcc < 1:3947725/150‑1 (MQ=255) gCAACTCAAGTTTTTTGCCAATCCCGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCt < 1:808902/150‑1 (MQ=255) gCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCt < 2:4576785/150‑1 (MQ=255) aaCTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTa < 2:3117863/150‑1 (MQ=255) aCTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAg < 1:3294505/150‑1 (MQ=255) cTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGt > 2:1344099/1‑150 (MQ=255) cTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGt > 2:383360/1‑150 (MQ=255) cTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGt > 2:688307/1‑150 (MQ=255) cAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCa > 2:739940/1‑150 (MQ=255) cAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCa < 1:2062434/150‑1 (MQ=255) aaGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCAc < 2:1330122/150‑1 (MQ=255) tttGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCaaa > 1:3221548/1‑150 (MQ=255) tttGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCaaa > 1:3223125/1‑150 (MQ=255) tGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAata < 1:1910299/150‑1 (MQ=255) tGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAata > 2:1314042/1‑150 (MQ=255) ccAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAatata > 1:945437/1‑150 (MQ=255) ccAATCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAatata > 2:2198027/1‑150 (MQ=255) cAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAatatat > 2:2045522/1‑150 (MQ=255) cAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAatatat < 2:554110/150‑1 (MQ=255) cAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAatatat < 1:2400725/150‑1 (MQ=255) aaTCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATAtt < 2:3084925/150‑1 (MQ=255) aTCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATAttt > 1:126754/1‑150 (MQ=255) aTCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATAttt < 2:4482996/150‑1 (MQ=255) tCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATAtttt < 2:2417138/150‑1 (MQ=255) tCCAGCTTTTGCTCGTCGGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATAtttt < 1:2035186/150‑1 (MQ=255) cAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGa > 1:3731492/1‑150 (MQ=255) cAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGa > 2:4453993/1‑150 (MQ=255) aGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGAc > 1:995201/1‑150 (MQ=255) ttttGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGgt > 2:4270993/1‑150 (MQ=255) cTCGTCGGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAAc > 1:1366461/1‑150 (MQ=255) tcgtcgGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACg < 2:3685729/150‑1 (MQ=255) tcgtcgGTACAGAGTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACg < 2:3497521/150‑1 (MQ=255) cgGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTg < 1:467657/150‑1 (MQ=255) ggTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGa < 2:3342606/150‑1 (MQ=255) ggTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGa > 2:4696468/1‑150 (MQ=255) gTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGAc < 2:3992608/150‑1 (MQ=255) gTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGAc < 2:4130266/150‑1 (MQ=255) cAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGACAAc > 2:3402110/1‑150 (MQ=255) agTCAGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGACAACCCa < 2:4052561/150‑1 (MQ=255) ccGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGACAACCCAAtt > 1:4268931/1‑150 (MQ=255) cGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGACAACCCAATTc > 2:1316714/1‑150 (MQ=255) | GTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAATGCCTTACCCAACGCGGTAATATGCAACTCAAGTTTTTTGCCAATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGCGACAACTCCTGCATTGGCCGCTTAGTCACCTCAAATATATTTTGACGGTGTAACGCCTGACAACCCAATTC > CP009273/4515115‑4515413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |